EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000045847 (Gene tree)
Gene ID: 558894
Gene Symbol: si:ch211-214j24.10
Alias: wu:fe25a04|wu:fi43c10|wu:fj94e11|wu:fv36e07|zgc:136274
Full Name: si:ch211-214j24.10
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 7854 bases
Position: chr4:5317483-5325336
Accession: ZDB-GENE-030131-6301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000125179	NUFIP2	PF15293.6	3e-20	1	1
ENSDARP00000067377	NUFIP2	PF15293.6	9.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000067378	-	1688	-	ENSDARP00000067377	273 (aa)	-	Q5RHZ5
ENSDART00000150366	-	945	XM_021475039	ENSDARP00000125179	215 (aa)	XP_021330714	H0WEA2

Gene Model

Click here to download ENSDARG00000045847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000045847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000045847	si:ch211-214j24.10	100	54.054	ENSAPOG00000017055	si:ch211-214j24.10	100	53.716	Acanthochromis_polyacanthus
ENSDARG00000045847	si:ch211-214j24.10	100	49.635	ENSACIG00000010613	si:ch211-214j24.10	100	48.540	Amphilophus_citrinellus
ENSDARG00000045847	si:ch211-214j24.10	100	53.378	ENSAOCG00000009719	si:ch211-214j24.10	100	53.041	Amphiprion_ocellaris
ENSDARG00000045847	si:ch211-214j24.10	100	53.378	ENSAPEG00000021403	si:ch211-214j24.10	100	53.041	Amphiprion_percula
ENSDARG00000045847	si:ch211-214j24.10	100	53.333	ENSATEG00000002825	si:ch211-214j24.10	83	53.333	Anabas_testudineus
ENSDARG00000045847	si:ch211-214j24.10	100	51.351	ENSACLG00000018365	si:ch211-214j24.10	100	51.014	Astatotilapia_calliptera
ENSDARG00000045847	si:ch211-214j24.10	99	61.149	ENSAMXG00000030271	si:ch211-214j24.10	100	61.695	Astyanax_mexicanus
ENSDARG00000045847	si:ch211-214j24.10	100	54.348	ENSCSEG00000017523	si:ch211-214j24.10	100	54.348	Cynoglossus_semilaevis
ENSDARG00000045847	si:ch211-214j24.10	100	52.921	ENSCVAG00000022007	si:ch211-214j24.10	100	52.577	Cyprinodon_variegatus
ENSDARG00000045847	si:ch211-214j24.10	100	54.636	ENSELUG00000021832	si:ch211-214j24.10	100	53.642	Esox_lucius
ENSDARG00000045847	si:ch211-214j24.10	100	51.877	ENSFHEG00000000763	si:ch211-214j24.10	100	51.557	Fundulus_heteroclitus
ENSDARG00000045847	si:ch211-214j24.10	100	52.145	ENSGAFG00000005353	si:ch211-214j24.10	100	51.333	Gambusia_affinis
ENSDARG00000045847	si:ch211-214j24.10	97	53.309	ENSGACG00000019495	si:ch211-214j24.10	99	53.309	Gasterosteus_aculeatus
ENSDARG00000045847	si:ch211-214j24.10	100	51.351	ENSHBUG00000005808	si:ch211-214j24.10	100	51.014	Haplochromis_burtoni
ENSDARG00000045847	si:ch211-214j24.10	100	52.365	ENSHCOG00000009918	si:ch211-214j24.10	100	52.703	Hippocampus_comes
ENSDARG00000045847	si:ch211-214j24.10	98	57.143	ENSIPUG00000005916	si:ch211-214j24.10	99	57.143	Ictalurus_punctatus
ENSDARG00000045847	si:ch211-214j24.10	100	51.087	ENSKMAG00000021149	si:ch211-214j24.10	100	51.087	Kryptolebias_marmoratus
ENSDARG00000045847	si:ch211-214j24.10	100	52.027	ENSLBEG00000010360	si:ch211-214j24.10	100	50.333	Labrus_bergylta
ENSDARG00000045847	si:ch211-214j24.10	100	54.054	ENSMAMG00000023522	si:ch211-214j24.10	100	54.054	Mastacembelus_armatus
ENSDARG00000045847	si:ch211-214j24.10	100	51.351	ENSMZEG00005014181	si:ch211-214j24.10	100	51.014	Maylandia_zebra
ENSDARG00000045847	si:ch211-214j24.10	100	53.710	ENSMMOG00000010023	si:ch211-214j24.10	100	53.004	Mola_mola
ENSDARG00000045847	si:ch211-214j24.10	100	52.492	ENSMALG00000011755	si:ch211-214j24.10	100	52.492	Monopterus_albus
ENSDARG00000045847	si:ch211-214j24.10	96	48.070	ENSNBRG00000005384	si:ch211-214j24.10	97	47.719	Neolamprologus_brichardi
ENSDARG00000045847	si:ch211-214j24.10	100	52.027	ENSONIG00000012083	si:ch211-214j24.10	100	51.689	Oreochromis_niloticus
ENSDARG00000045847	si:ch211-214j24.10	100	54.639	ENSORLG00000012343	si:ch211-214j24.10	100	52.921	Oryzias_latipes
ENSDARG00000045847	si:ch211-214j24.10	100	53.952	ENSORLG00020021390	si:ch211-214j24.10	100	52.577	Oryzias_latipes_hni
ENSDARG00000045847	si:ch211-214j24.10	100	52.297	ENSORLG00015020102	si:ch211-214j24.10	100	52.465	Oryzias_latipes_hsok
ENSDARG00000045847	si:ch211-214j24.10	100	53.793	ENSOMEG00000018780	si:ch211-214j24.10	100	53.793	Oryzias_melastigma
ENSDARG00000045847	si:ch211-214j24.10	99	51.701	ENSPKIG00000000279	-	97	50.000	Paramormyrops_kingsleyae
ENSDARG00000045847	si:ch211-214j24.10	60	57.229	ENSPMGG00000005149	si:ch211-214j24.10	85	57.862	Periophthalmus_magnuspinnatus
ENSDARG00000045847	si:ch211-214j24.10	97	53.571	ENSPFOG00000004046	si:ch211-214j24.10	91	52.857	Poecilia_formosa
ENSDARG00000045847	si:ch211-214j24.10	100	52.595	ENSPLAG00000012844	si:ch211-214j24.10	100	53.287	Poecilia_latipinna
ENSDARG00000045847	si:ch211-214j24.10	100	54.325	ENSPMEG00000011245	si:ch211-214j24.10	100	53.633	Poecilia_mexicana
ENSDARG00000045847	si:ch211-214j24.10	100	51.429	ENSPREG00000014266	si:ch211-214j24.10	100	49.643	Poecilia_reticulata
ENSDARG00000045847	si:ch211-214j24.10	100	51.351	ENSPNYG00000023934	si:ch211-214j24.10	100	51.014	Pundamilia_nyererei
ENSDARG00000045847	si:ch211-214j24.10	100	52.649	ENSSFOG00015001996	si:ch211-214j24.10	100	52.649	Scleropages_formosus
ENSDARG00000045847	si:ch211-214j24.10	100	54.849	ENSSMAG00000013405	si:ch211-214j24.10	100	54.849	Scophthalmus_maximus
ENSDARG00000045847	si:ch211-214j24.10	100	53.535	ENSSDUG00000016433	si:ch211-214j24.10	100	52.703	Seriola_dumerili
ENSDARG00000045847	si:ch211-214j24.10	99	51.712	ENSSLDG00000022965	si:ch211-214j24.10	99	52.788	Seriola_lalandi_dorsalis
ENSDARG00000045847	si:ch211-214j24.10	100	54.054	ENSSPAG00000000573	si:ch211-214j24.10	100	53.716	Stegastes_partitus
ENSDARG00000045847	si:ch211-214j24.10	100	51.890	ENSTRUG00000003852	si:ch211-214j24.10	100	51.890	Takifugu_rubripes
ENSDARG00000045847	si:ch211-214j24.10	96	52.788	ENSXCOG00000015231	si:ch211-214j24.10	97	50.929	Xiphophorus_couchianus
ENSDARG00000045847	si:ch211-214j24.10	100	53.199	ENSXMAG00000006212	si:ch211-214j24.10	100	51.515	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function