EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000045930 (Gene tree)
Gene ID: 436682
Gene Symbol: rbpms2a
Alias: zgc:92689
Full Name: RNA binding protein%2C mRNA processing factor 2a
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 30255 bases
Position: chr25:6122823-6153077
Accession: ZDB-GENE-040718-106
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000067513	RRM_1	PF00076.22	1.7e-11	1	1
ENSDARP00000151988	RRM_1	PF00076.22	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000191824	-	4834	XM_005162967	ENSDARP00000151988	199 (aa)	XP_005163024	Q6DH13
ENSDART00000067514	-	1442	-	ENSDARP00000067513	199 (aa)	-	Q6DH13

Gene Model

Click here to download ENSDARG00000045930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000045930's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000045930	rbpms2a	100	91.500	ENSDARG00000079578	rbpms2b	98	93.590
ENSDARG00000045930	rbpms2a	89	59.887	ENSDARG00000099396	rbpms	100	58.757

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000045930	rbpms2a	93	89.730	ENSG00000166831	RBPMS2	100	85.859	Homo_sapiens
ENSDARG00000045930	rbpms2a	100	93.970	ENSAPOG00000007842	rbpms2b	100	93.970	Acanthochromis_polyacanthus
ENSDARG00000045930	rbpms2a	93	86.559	ENSAMEG00000002664	RBPMS2	99	79.904	Ailuropoda_melanoleuca
ENSDARG00000045930	rbpms2a	100	91.457	ENSACIG00000013696	rbpms2b	74	91.457	Amphilophus_citrinellus
ENSDARG00000045930	rbpms2a	100	93.467	ENSAOCG00000000105	rbpms2b	73	93.467	Amphiprion_ocellaris
ENSDARG00000045930	rbpms2a	100	93.467	ENSAPEG00000001705	rbpms2b	100	93.467	Amphiprion_percula
ENSDARG00000045930	rbpms2a	100	93.970	ENSATEG00000020326	rbpms2b	74	93.970	Anabas_testudineus
ENSDARG00000045930	rbpms2a	93	93.514	ENSAPLG00000004799	RBPMS2	90	93.514	Anas_platyrhynchos
ENSDARG00000045930	rbpms2a	81	96.894	ENSACAG00000012227	RBPMS2	100	96.894	Anolis_carolinensis
ENSDARG00000045930	rbpms2a	93	90.270	ENSANAG00000014652	RBPMS2	90	89.785	Aotus_nancymaae
ENSDARG00000045930	rbpms2a	100	93.970	ENSACLG00000012769	rbpms2b	74	93.970	Astatotilapia_calliptera
ENSDARG00000045930	rbpms2a	100	91.000	ENSAMXG00000037525	rbpms2b	100	91.000	Astyanax_mexicanus
ENSDARG00000045930	rbpms2a	100	94.118	ENSAMXG00000036507	rbpms2a	100	94.118	Astyanax_mexicanus
ENSDARG00000045930	rbpms2a	82	53.988	ENSBTAG00000049268	-	64	55.128	Bos_taurus
ENSDARG00000045930	rbpms2a	93	89.189	ENSBTAG00000011037	RBPMS2	92	85.128	Bos_taurus
ENSDARG00000045930	rbpms2a	93	89.730	ENSCJAG00000005200	RBPMS2	93	85.641	Callithrix_jacchus
ENSDARG00000045930	rbpms2a	93	86.096	ENSCAFG00000017098	RBPMS2	91	82.143	Canis_familiaris
ENSDARG00000045930	rbpms2a	93	86.096	ENSCAFG00020008908	RBPMS2	91	82.143	Canis_lupus_dingo
ENSDARG00000045930	rbpms2a	91	87.845	ENSCHIG00000024439	RBPMS2	91	87.845	Capra_hircus
ENSDARG00000045930	rbpms2a	91	85.714	ENSTSYG00000008996	-	84	87.912	Carlito_syrichta
ENSDARG00000045930	rbpms2a	99	72.637	ENSTSYG00000033527	-	87	80.000	Carlito_syrichta
ENSDARG00000045930	rbpms2a	91	81.215	ENSCAPG00000015689	RBPMS2	100	79.558	Cavia_aperea
ENSDARG00000045930	rbpms2a	91	81.215	ENSCPOG00000007695	RBPMS2	100	79.558	Cavia_porcellus
ENSDARG00000045930	rbpms2a	93	90.270	ENSCCAG00000036496	RBPMS2	93	86.154	Cebus_capucinus
ENSDARG00000045930	rbpms2a	93	89.189	ENSCATG00000042116	RBPMS2	94	84.343	Cercocebus_atys
ENSDARG00000045930	rbpms2a	91	86.188	ENSCLAG00000016082	RBPMS2	100	84.530	Chinchilla_lanigera
ENSDARG00000045930	rbpms2a	91	89.011	ENSCSAG00000012562	RBPMS2	83	89.011	Chlorocebus_sabaeus
ENSDARG00000045930	rbpms2a	98	90.306	ENSCPBG00000006048	RBPMS2	98	90.306	Chrysemys_picta_bellii
ENSDARG00000045930	rbpms2a	96	82.292	ENSCGRG00001014627	Rbpms2	92	83.333	Cricetulus_griseus_chok1gshd
ENSDARG00000045930	rbpms2a	91	83.516	ENSCGRG00000005899	Rbpms2	100	84.615	Cricetulus_griseus_crigri
ENSDARG00000045930	rbpms2a	100	94.472	ENSCVAG00000004878	rbpms2b	77	94.472	Cyprinodon_variegatus
ENSDARG00000045930	rbpms2a	94	84.043	ENSDNOG00000048895	RBPMS2	92	86.170	Dasypus_novemcinctus
ENSDARG00000045930	rbpms2a	94	85.027	ENSDORG00000004025	-	100	82.353	Dipodomys_ordii
ENSDARG00000045930	rbpms2a	93	76.216	ENSDORG00000023373	-	99	72.539	Dipodomys_ordii
ENSDARG00000045930	rbpms2a	94	83.684	ENSETEG00000010176	RBPMS2	99	81.579	Echinops_telfairi
ENSDARG00000045930	rbpms2a	92	76.344	ENSEBUG00000000297	RBPMS2	93	78.495	Eptatretus_burgeri
ENSDARG00000045930	rbpms2a	98	67.513	ENSEBUG00000012768	RBPMS2	89	74.522	Eptatretus_burgeri
ENSDARG00000045930	rbpms2a	98	51.500	ENSEBUG00000005004	-	98	49.275	Eptatretus_burgeri
ENSDARG00000045930	rbpms2a	93	86.022	ENSEASG00005006523	RBPMS2	99	80.569	Equus_asinus_asinus
ENSDARG00000045930	rbpms2a	91	86.264	ENSECAG00000015345	RBPMS2	84	88.462	Equus_caballus
ENSDARG00000045930	rbpms2a	100	95.000	ENSELUG00000023770	RBPMS	100	95.000	Esox_lucius
ENSDARG00000045930	rbpms2a	99	92.424	ENSELUG00000021784	rbpms2b	96	85.227	Esox_lucius
ENSDARG00000045930	rbpms2a	93	86.559	ENSFCAG00000032451	RBPMS2	99	81.818	Felis_catus
ENSDARG00000045930	rbpms2a	98	88.776	ENSFALG00000009836	RBPMS2	98	88.776	Ficedula_albicollis
ENSDARG00000045930	rbpms2a	91	86.188	ENSFDAG00000016154	RBPMS2	100	83.978	Fukomys_damarensis
ENSDARG00000045930	rbpms2a	100	94.472	ENSFHEG00000014766	rbpms2b	76	94.472	Fundulus_heteroclitus
ENSDARG00000045930	rbpms2a	91	95.604	ENSGMOG00000008502	rbpms2b	100	95.604	Gadus_morhua
ENSDARG00000045930	rbpms2a	99	89.950	ENSGALG00000030988	RBPMS2	99	89.950	Gallus_gallus
ENSDARG00000045930	rbpms2a	100	80.905	ENSGAFG00000002978	rbpms2b	100	80.905	Gambusia_affinis
ENSDARG00000045930	rbpms2a	91	93.956	ENSGACG00000017472	rbpms2b	100	93.956	Gasterosteus_aculeatus
ENSDARG00000045930	rbpms2a	98	89.796	ENSGAGG00000020044	RBPMS2	98	89.796	Gopherus_agassizii
ENSDARG00000045930	rbpms2a	91	90.055	ENSGGOG00000008984	RBPMS2	100	90.055	Gorilla_gorilla
ENSDARG00000045930	rbpms2a	100	93.970	ENSHBUG00000009135	rbpms2b	74	93.970	Haplochromis_burtoni
ENSDARG00000045930	rbpms2a	97	83.938	ENSHGLG00000008504	RBPMS2	95	81.026	Heterocephalus_glaber_female
ENSDARG00000045930	rbpms2a	91	87.293	ENSHGLG00100019122	RBPMS2	100	85.083	Heterocephalus_glaber_male
ENSDARG00000045930	rbpms2a	100	94.472	ENSHCOG00000018429	rbpms2b	100	94.472	Hippocampus_comes
ENSDARG00000045930	rbpms2a	100	90.452	ENSIPUG00000020981	RBPMS	99	89.503	Ictalurus_punctatus
ENSDARG00000045930	rbpms2a	100	95.477	ENSIPUG00000014032	RBPMS	100	95.477	Ictalurus_punctatus
ENSDARG00000045930	rbpms2a	93	86.022	ENSSTOG00000010055	RBPMS2	99	82.439	Ictidomys_tridecemlineatus
ENSDARG00000045930	rbpms2a	99	82.234	ENSJJAG00000001664	Rbpms2	98	82.234	Jaculus_jaculus
ENSDARG00000045930	rbpms2a	100	93.467	ENSKMAG00000002005	rbpms2b	69	93.467	Kryptolebias_marmoratus
ENSDARG00000045930	rbpms2a	80	94.375	ENSLBEG00000017287	rbpms2b	74	94.375	Labrus_bergylta
ENSDARG00000045930	rbpms2a	97	87.629	ENSLACG00000016999	RBPMS2	100	85.427	Latimeria_chalumnae
ENSDARG00000045930	rbpms2a	99	92.424	ENSLOCG00000015018	rbpms2b	99	92.424	Lepisosteus_oculatus
ENSDARG00000045930	rbpms2a	91	86.813	ENSLAFG00000018725	RBPMS2	100	84.615	Loxodonta_africana
ENSDARG00000045930	rbpms2a	93	88.649	ENSMFAG00000045343	RBPMS2	94	83.838	Macaca_fascicularis
ENSDARG00000045930	rbpms2a	93	88.649	ENSMMUG00000013270	RBPMS2	94	83.838	Macaca_mulatta
ENSDARG00000045930	rbpms2a	93	88.649	ENSMNEG00000019330	RBPMS2	94	83.838	Macaca_nemestrina
ENSDARG00000045930	rbpms2a	91	88.950	ENSMLEG00000035922	RBPMS2	100	88.950	Mandrillus_leucophaeus
ENSDARG00000045930	rbpms2a	100	93.970	ENSMAMG00000014149	rbpms2b	97	96.154	Mastacembelus_armatus
ENSDARG00000045930	rbpms2a	100	93.970	ENSMZEG00005013727	rbpms2b	100	93.970	Maylandia_zebra
ENSDARG00000045930	rbpms2a	99	89.394	ENSMGAG00000001128	RBPMS2	99	89.394	Meleagris_gallopavo
ENSDARG00000045930	rbpms2a	96	85.340	ENSMAUG00000019407	Rbpms2	99	85.340	Mesocricetus_auratus
ENSDARG00000045930	rbpms2a	93	89.247	ENSMICG00000029953	RBPMS2	99	82.775	Microcebus_murinus
ENSDARG00000045930	rbpms2a	94	84.492	ENSMOCG00000021603	Rbpms2	93	84.492	Microtus_ochrogaster
ENSDARG00000045930	rbpms2a	97	93.814	ENSMMOG00000002240	rbpms2b	95	93.814	Mola_mola
ENSDARG00000045930	rbpms2a	93	94.054	ENSMODG00000010487	RBPMS2	99	86.667	Monodelphis_domestica
ENSDARG00000045930	rbpms2a	100	83.920	ENSMALG00000014621	rbpms2b	73	83.920	Monopterus_albus
ENSDARG00000045930	rbpms2a	99	80.976	MGP_CAROLIEiJ_G0032367	Rbpms2	99	79.512	Mus_caroli
ENSDARG00000045930	rbpms2a	99	80.976	ENSMUSG00000032387	Rbpms2	99	79.512	Mus_musculus
ENSDARG00000045930	rbpms2a	93	86.559	MGP_PahariEiJ_G0015232	Rbpms2	99	79.710	Mus_pahari
ENSDARG00000045930	rbpms2a	99	80.976	MGP_SPRETEiJ_G0033506	Rbpms2	99	79.512	Mus_spretus
ENSDARG00000045930	rbpms2a	91	85.165	ENSMPUG00000000553	RBPMS2	90	85.165	Mustela_putorius_furo
ENSDARG00000045930	rbpms2a	76	86.184	ENSMLUG00000013394	RBPMS2	75	86.184	Myotis_lucifugus
ENSDARG00000045930	rbpms2a	99	80.882	ENSNGAG00000023569	Rbpms2	99	82.843	Nannospalax_galili
ENSDARG00000045930	rbpms2a	100	94.472	ENSNBRG00000019943	rbpms2b	74	94.472	Neolamprologus_brichardi
ENSDARG00000045930	rbpms2a	82	82.822	ENSOPRG00000013668	RBPMS2	100	82.822	Ochotona_princeps
ENSDARG00000045930	rbpms2a	91	85.083	ENSODEG00000016172	RBPMS2	95	82.873	Octodon_degus
ENSDARG00000045930	rbpms2a	100	93.970	ENSONIG00000005770	rbpms2b	100	93.970	Oreochromis_niloticus
ENSDARG00000045930	rbpms2a	57	91.228	ENSOANG00000011802	-	80	91.228	Ornithorhynchus_anatinus
ENSDARG00000045930	rbpms2a	93	86.559	ENSOCUG00000010388	RBPMS2	93	84.694	Oryctolagus_cuniculus
ENSDARG00000045930	rbpms2a	100	93.970	ENSORLG00000027223	rbpms2b	75	93.970	Oryzias_latipes
ENSDARG00000045930	rbpms2a	100	93.970	ENSORLG00020001166	rbpms2b	75	93.970	Oryzias_latipes_hni
ENSDARG00000045930	rbpms2a	100	93.970	ENSORLG00015001749	rbpms2b	75	93.970	Oryzias_latipes_hsok
ENSDARG00000045930	rbpms2a	100	94.472	ENSOMEG00000006495	rbpms2b	100	87.940	Oryzias_melastigma
ENSDARG00000045930	rbpms2a	94	86.096	ENSOGAG00000026017	RBPMS2	92	86.096	Otolemur_garnettii
ENSDARG00000045930	rbpms2a	93	87.097	ENSOARG00000020727	RBPMS2	89	87.097	Ovis_aries
ENSDARG00000045930	rbpms2a	91	90.055	ENSPPAG00000024456	RBPMS2	100	90.055	Pan_paniscus
ENSDARG00000045930	rbpms2a	93	86.559	ENSPPRG00000014944	RBPMS2	99	81.818	Panthera_pardus
ENSDARG00000045930	rbpms2a	91	86.264	ENSPTIG00000017879	RBPMS2	86	88.462	Panthera_tigris_altaica
ENSDARG00000045930	rbpms2a	93	90.270	ENSPTRG00000007165	RBPMS2	94	85.354	Pan_troglodytes
ENSDARG00000045930	rbpms2a	99	82.524	ENSPANG00000016754	RBPMS2	99	82.524	Papio_anubis
ENSDARG00000045930	rbpms2a	100	87.940	ENSPKIG00000012634	rbpms2b	100	86.432	Paramormyrops_kingsleyae
ENSDARG00000045930	rbpms2a	100	93.970	ENSPKIG00000022509	rbpms2a	100	93.970	Paramormyrops_kingsleyae
ENSDARG00000045930	rbpms2a	91	93.370	ENSPSIG00000013115	RBPMS2	100	93.370	Pelodiscus_sinensis
ENSDARG00000045930	rbpms2a	87	95.977	ENSPMGG00000021154	rbpms2b	88	95.977	Periophthalmus_magnuspinnatus
ENSDARG00000045930	rbpms2a	99	89.706	ENSPCIG00000029447	RBPMS2	99	89.706	Phascolarctos_cinereus
ENSDARG00000045930	rbpms2a	100	94.472	ENSPFOG00000016067	rbpms2b	100	94.472	Poecilia_formosa
ENSDARG00000045930	rbpms2a	100	94.472	ENSPLAG00000008831	rbpms2b	100	94.472	Poecilia_latipinna
ENSDARG00000045930	rbpms2a	100	94.472	ENSPMEG00000007868	rbpms2b	100	94.472	Poecilia_mexicana
ENSDARG00000045930	rbpms2a	100	92.157	ENSPREG00000005953	rbpms2b	100	92.157	Poecilia_reticulata
ENSDARG00000045930	rbpms2a	92	85.027	ENSPPYG00000006553	-	83	85.027	Pongo_abelii
ENSDARG00000045930	rbpms2a	91	85.083	ENSPCAG00000015797	RBPMS2	100	82.873	Procavia_capensis
ENSDARG00000045930	rbpms2a	93	88.649	ENSPCOG00000023778	RBPMS2	99	80.288	Propithecus_coquereli
ENSDARG00000045930	rbpms2a	91	85.165	ENSPVAG00000016622	RBPMS2	100	87.363	Pteropus_vampyrus
ENSDARG00000045930	rbpms2a	100	93.970	ENSPNYG00000010761	rbpms2b	74	93.970	Pundamilia_nyererei
ENSDARG00000045930	rbpms2a	100	96.482	ENSPNAG00000027343	rbpms2a	100	96.482	Pygocentrus_nattereri
ENSDARG00000045930	rbpms2a	100	91.457	ENSPNAG00000004816	rbpms2b	100	91.457	Pygocentrus_nattereri
ENSDARG00000045930	rbpms2a	93	87.097	ENSRNOG00000015896	Rbpms2	93	83.163	Rattus_norvegicus
ENSDARG00000045930	rbpms2a	91	88.950	ENSRROG00000006473	RBPMS2	90	88.462	Rhinopithecus_roxellana
ENSDARG00000045930	rbpms2a	91	90.055	ENSSBOG00000020118	RBPMS2	100	90.055	Saimiri_boliviensis_boliviensis
ENSDARG00000045930	rbpms2a	91	93.923	ENSSHAG00000007448	RBPMS2	100	93.923	Sarcophilus_harrisii
ENSDARG00000045930	rbpms2a	100	92.000	ENSSFOG00015010476	rbpms2b	99	92.857	Scleropages_formosus
ENSDARG00000045930	rbpms2a	100	95.980	ENSSFOG00015022055	rbpms2	100	95.980	Scleropages_formosus
ENSDARG00000045930	rbpms2a	100	86.385	ENSSMAG00000009743	rbpms2b	71	86.385	Scophthalmus_maximus
ENSDARG00000045930	rbpms2a	100	91.667	ENSSLDG00000023070	rbpms2b	73	91.667	Seriola_lalandi_dorsalis
ENSDARG00000045930	rbpms2a	98	89.286	ENSSPUG00000006378	RBPMS2	98	89.286	Sphenodon_punctatus
ENSDARG00000045930	rbpms2a	100	93.970	ENSSPAG00000001979	rbpms2b	100	93.970	Stegastes_partitus
ENSDARG00000045930	rbpms2a	93	85.027	ENSSSCG00000004549	RBPMS2	99	80.095	Sus_scrofa
ENSDARG00000045930	rbpms2a	71	95.775	ENSTGUG00000004722	RBPMS2	88	95.775	Taeniopygia_guttata
ENSDARG00000045930	rbpms2a	100	92.965	ENSTRUG00000025375	rbpms2b	74	92.965	Takifugu_rubripes
ENSDARG00000045930	rbpms2a	93	86.486	ENSTTRG00000011840	RBPMS2	96	82.564	Tursiops_truncatus
ENSDARG00000045930	rbpms2a	93	84.946	ENSUMAG00000012614	RBPMS2	92	80.711	Ursus_maritimus
ENSDARG00000045930	rbpms2a	99	80.402	ENSVVUG00000013801	RBPMS2	98	80.402	Vulpes_vulpes
ENSDARG00000045930	rbpms2a	91	96.685	ENSXCOG00000000567	rbpms2b	93	96.685	Xiphophorus_couchianus
ENSDARG00000045930	rbpms2a	100	94.472	ENSXMAG00000001210	rbpms2b	100	94.472	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0031290	retinal ganglion cell axon guidance	27974617.	IGI	Process
GO:0035614	snRNA stem-loop binding	21873635.	IBA	Function
GO:0042803	protein homodimerization activity	-	IEA	Function
GO:0048813	dendrite morphogenesis	23785151.	IGI	Process
GO:0090259	regulation of retinal ganglion cell axon guidance	27974617.	IGI	Process