EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000052344 (Gene tree)
Gene ID: 492761
Gene Symbol: tbl3
Alias: cey|zgc:101778
Full Name: transducin (beta)-like 3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 21117 bases
Position: chr3:62173396-62194512
Accession: ZDB-GENE-041114-104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000068663	Utp13	PF08625.11	2.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000074174	-	2694	-	ENSDARP00000068663	897 (aa)	-	F1QYF0

Gene Model

Click here to download ENSDARG00000052344's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000052344's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000052344	tbl3	73	35.185	ENSDARG00000016903	wdr5	95	35.185
ENSDARG00000052344	tbl3	65	32.895	ENSDARG00000067639	prpf4	57	32.895
ENSDARG00000052344	tbl3	58	31.724	ENSDARG00000015239	prpf19	61	31.724

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000052344	tbl3	88	53.258	ENSG00000183751	TBL3	97	52.228	Homo_sapiens
ENSDARG00000052344	tbl3	96	63.667	ENSAPOG00000021308	tbl3	89	66.304	Acanthochromis_polyacanthus
ENSDARG00000052344	tbl3	88	53.729	ENSAMEG00000017654	TBL3	97	52.481	Ailuropoda_melanoleuca
ENSDARG00000052344	tbl3	88	67.786	ENSACIG00000007459	tbl3	99	66.625	Amphilophus_citrinellus
ENSDARG00000052344	tbl3	95	64.843	ENSAOCG00000000453	tbl3	89	66.425	Amphiprion_ocellaris
ENSDARG00000052344	tbl3	88	67.252	ENSAPEG00000010228	tbl3	99	67.252	Amphiprion_percula
ENSDARG00000052344	tbl3	93	65.793	ENSATEG00000024571	tbl3	94	64.865	Anabas_testudineus
ENSDARG00000052344	tbl3	83	41.053	ENSAPLG00000008515	TBL3	99	44.545	Anas_platyrhynchos
ENSDARG00000052344	tbl3	88	53.759	ENSANAG00000030472	TBL3	98	52.723	Aotus_nancymaae
ENSDARG00000052344	tbl3	95	64.651	ENSACLG00000027954	tbl3	99	64.743	Astatotilapia_calliptera
ENSDARG00000052344	tbl3	96	67.580	ENSAMXG00000042589	tbl3	91	68.464	Astyanax_mexicanus
ENSDARG00000052344	tbl3	88	54.010	ENSBTAG00000020366	TBL3	96	53.759	Bos_taurus
ENSDARG00000052344	tbl3	88	53.885	ENSCJAG00000015245	TBL3	97	52.970	Callithrix_jacchus
ENSDARG00000052344	tbl3	89	52.912	ENSCAFG00000019430	TBL3	98	51.897	Canis_familiaris
ENSDARG00000052344	tbl3	89	53.043	ENSCAFG00020026321	TBL3	98	52.025	Canis_lupus_dingo
ENSDARG00000052344	tbl3	88	53.021	ENSCHIG00000007747	TBL3	96	53.692	Capra_hircus
ENSDARG00000052344	tbl3	88	53.442	ENSTSYG00000036142	TBL3	97	53.317	Carlito_syrichta
ENSDARG00000052344	tbl3	88	49.310	ENSCAPG00000016762	TBL3	95	48.934	Cavia_aperea
ENSDARG00000052344	tbl3	88	53.625	ENSCPOG00000005998	TBL3	98	53.250	Cavia_porcellus
ENSDARG00000052344	tbl3	88	53.885	ENSCCAG00000034486	TBL3	97	52.847	Cebus_capucinus
ENSDARG00000052344	tbl3	88	53.133	ENSCATG00000031298	TBL3	97	52.104	Cercocebus_atys
ENSDARG00000052344	tbl3	88	53.375	ENSCLAG00000013342	TBL3	98	53.308	Chinchilla_lanigera
ENSDARG00000052344	tbl3	88	52.882	ENSCSAG00000011191	TBL3	97	51.856	Chlorocebus_sabaeus
ENSDARG00000052344	tbl3	88	57.736	ENSCPBG00000000253	TBL3	97	57.572	Chrysemys_picta_bellii
ENSDARG00000052344	tbl3	88	42.537	ENSCING00000009521	-	99	41.915	Ciona_intestinalis
ENSDARG00000052344	tbl3	88	53.191	ENSCANG00000031169	TBL3	97	52.163	Colobus_angolensis_palliatus
ENSDARG00000052344	tbl3	88	53.817	ENSCGRG00001021817	Tbl3	98	53.692	Cricetulus_griseus_chok1gshd
ENSDARG00000052344	tbl3	88	53.817	ENSCGRG00000013364	Tbl3	98	53.692	Cricetulus_griseus_crigri
ENSDARG00000052344	tbl3	92	66.426	ENSCSEG00000015634	tbl3	99	64.815	Cynoglossus_semilaevis
ENSDARG00000052344	tbl3	94	64.734	ENSCVAG00000002720	tbl3	99	65.604	Cyprinodon_variegatus
ENSDARG00000052344	tbl3	75	48.817	ENSDNOG00000019996	TBL3	89	49.313	Dasypus_novemcinctus
ENSDARG00000052344	tbl3	88	54.591	ENSDORG00000007377	Tbl3	97	54.340	Dipodomys_ordii
ENSDARG00000052344	tbl3	87	31.411	FBgn0033454	CG1671	99	31.689	Drosophila_melanogaster
ENSDARG00000052344	tbl3	75	59.851	ENSETEG00000019403	TBL3	84	59.851	Echinops_telfairi
ENSDARG00000052344	tbl3	93	48.445	ENSEBUG00000003526	tbl3	98	47.052	Eptatretus_burgeri
ENSDARG00000052344	tbl3	88	54.193	ENSEASG00005004649	TBL3	97	53.942	Equus_asinus_asinus
ENSDARG00000052344	tbl3	88	54.193	ENSECAG00000019299	TBL3	97	54.010	Equus_caballus
ENSDARG00000052344	tbl3	70	54.860	ENSEEUG00000000761	-	60	53.586	Erinaceus_europaeus
ENSDARG00000052344	tbl3	88	44.800	ENSELUG00000007394	tbl3	98	55.654	Esox_lucius
ENSDARG00000052344	tbl3	88	54.193	ENSFCAG00000011740	TBL3	98	54.193	Felis_catus
ENSDARG00000052344	tbl3	88	56.250	ENSFALG00000003409	TBL3	98	55.610	Ficedula_albicollis
ENSDARG00000052344	tbl3	88	53.625	ENSFDAG00000007751	TBL3	98	53.442	Fukomys_damarensis
ENSDARG00000052344	tbl3	94	64.947	ENSFHEG00000002234	tbl3	92	64.871	Fundulus_heteroclitus
ENSDARG00000052344	tbl3	89	52.768	ENSGMOG00000011562	tbl3	99	61.290	Gadus_morhua
ENSDARG00000052344	tbl3	90	56.704	ENSGALG00000005558	TBL3	99	56.273	Gallus_gallus
ENSDARG00000052344	tbl3	95	64.726	ENSGAFG00000020165	tbl3	91	66.145	Gambusia_affinis
ENSDARG00000052344	tbl3	94	64.554	ENSGACG00000011960	tbl3	99	66.667	Gasterosteus_aculeatus
ENSDARG00000052344	tbl3	89	56.984	ENSGAGG00000024028	TBL3	98	56.860	Gopherus_agassizii
ENSDARG00000052344	tbl3	88	53.258	ENSGGOG00000009378	TBL3	97	52.228	Gorilla_gorilla
ENSDARG00000052344	tbl3	95	64.651	ENSHBUG00000011872	tbl3	99	65.625	Haplochromis_burtoni
ENSDARG00000052344	tbl3	88	53.375	ENSHGLG00000002431	TBL3	98	53.125	Heterocephalus_glaber_female
ENSDARG00000052344	tbl3	88	52.750	ENSHGLG00100012878	TBL3	98	52.500	Heterocephalus_glaber_male
ENSDARG00000052344	tbl3	93	63.669	ENSHCOG00000016689	tbl3	95	62.100	Hippocampus_comes
ENSDARG00000052344	tbl3	94	67.612	ENSIPUG00000003568	TBL3	90	68.561	Ictalurus_punctatus
ENSDARG00000052344	tbl3	88	54.500	ENSSTOG00000012964	TBL3	98	54.318	Ictidomys_tridecemlineatus
ENSDARG00000052344	tbl3	88	53.643	ENSJJAG00000004124	Tbl3	98	53.459	Jaculus_jaculus
ENSDARG00000052344	tbl3	97	62.344	ENSKMAG00000020117	tbl3	99	64.099	Kryptolebias_marmoratus
ENSDARG00000052344	tbl3	94	64.671	ENSLBEG00000026742	tbl3	94	63.512	Labrus_bergylta
ENSDARG00000052344	tbl3	89	57.391	ENSLACG00000000615	TBL3	99	57.143	Latimeria_chalumnae
ENSDARG00000052344	tbl3	96	62.153	ENSLOCG00000008853	tbl3	89	63.515	Lepisosteus_oculatus
ENSDARG00000052344	tbl3	88	54.125	ENSLAFG00000004699	TBL3	98	53.942	Loxodonta_africana
ENSDARG00000052344	tbl3	88	53.008	ENSMFAG00000030302	TBL3	97	51.980	Macaca_fascicularis
ENSDARG00000052344	tbl3	88	53.008	ENSMMUG00000007943	TBL3	97	51.980	Macaca_mulatta
ENSDARG00000052344	tbl3	88	53.008	ENSMNEG00000032603	TBL3	97	51.980	Macaca_nemestrina
ENSDARG00000052344	tbl3	87	53.023	ENSMLEG00000043359	TBL3	98	51.990	Mandrillus_leucophaeus
ENSDARG00000052344	tbl3	93	66.310	ENSMAMG00000023507	tbl3	90	65.533	Mastacembelus_armatus
ENSDARG00000052344	tbl3	95	64.535	ENSMZEG00005000630	tbl3	98	64.258	Maylandia_zebra
ENSDARG00000052344	tbl3	90	56.235	ENSMGAG00000005694	TBL3	99	55.758	Meleagris_gallopavo
ENSDARG00000052344	tbl3	88	53.674	ENSMAUG00000008718	Tbl3	98	53.500	Mesocricetus_auratus
ENSDARG00000052344	tbl3	88	53.817	ENSMICG00000012787	TBL3	85	53.567	Microcebus_murinus
ENSDARG00000052344	tbl3	88	54.318	ENSMOCG00000019634	Tbl3	98	54.193	Microtus_ochrogaster
ENSDARG00000052344	tbl3	91	66.504	ENSMMOG00000007551	tbl3	100	63.835	Mola_mola
ENSDARG00000052344	tbl3	89	54.489	ENSMODG00000016091	TBL3	98	54.239	Monodelphis_domestica
ENSDARG00000052344	tbl3	93	66.033	ENSMALG00000007013	tbl3	89	66.146	Monopterus_albus
ENSDARG00000052344	tbl3	88	54.068	MGP_CAROLIEiJ_G0021199	Tbl3	98	53.875	Mus_caroli
ENSDARG00000052344	tbl3	88	53.750	ENSMUSG00000040688	Tbl3	98	53.692	Mus_musculus
ENSDARG00000052344	tbl3	88	54.068	MGP_PahariEiJ_G0023516	Tbl3	98	53.942	Mus_pahari
ENSDARG00000052344	tbl3	88	53.875	MGP_SPRETEiJ_G0022110	Tbl3	98	53.817	Mus_spretus
ENSDARG00000052344	tbl3	88	53.634	ENSMPUG00000015545	TBL3	97	52.723	Mustela_putorius_furo
ENSDARG00000052344	tbl3	88	54.534	ENSMLUG00000011684	TBL3	98	54.156	Myotis_lucifugus
ENSDARG00000052344	tbl3	88	52.750	ENSNGAG00000002428	Tbl3	98	52.750	Nannospalax_galili
ENSDARG00000052344	tbl3	88	64.456	ENSNBRG00000003173	tbl3	98	63.875	Neolamprologus_brichardi
ENSDARG00000052344	tbl3	88	53.133	ENSNLEG00000008889	TBL3	96	52.104	Nomascus_leucogenys
ENSDARG00000052344	tbl3	82	49.130	ENSMEUG00000004011	TBL3	99	49.130	Notamacropus_eugenii
ENSDARG00000052344	tbl3	86	51.617	ENSOPRG00000002527	-	95	50.958	Ochotona_princeps
ENSDARG00000052344	tbl3	88	52.625	ENSODEG00000013930	TBL3	98	52.500	Octodon_degus
ENSDARG00000052344	tbl3	95	65.421	ENSONIG00000002319	tbl3	98	67.544	Oreochromis_niloticus
ENSDARG00000052344	tbl3	88	53.931	ENSOANG00000009819	TBL3	99	53.563	Ornithorhynchus_anatinus
ENSDARG00000052344	tbl3	93	64.421	ENSORLG00000009312	tbl3	95	65.963	Oryzias_latipes
ENSDARG00000052344	tbl3	94	63.509	ENSORLG00020017711	tbl3	95	65.590	Oryzias_latipes_hni
ENSDARG00000052344	tbl3	93	63.948	ENSORLG00015007004	tbl3	89	64.501	Oryzias_latipes_hsok
ENSDARG00000052344	tbl3	99	62.597	ENSOMEG00000012684	tbl3	97	64.845	Oryzias_melastigma
ENSDARG00000052344	tbl3	88	54.250	ENSOGAG00000010104	TBL3	97	53.817	Otolemur_garnettii
ENSDARG00000052344	tbl3	82	48.503	ENSOARG00000017059	TBL3	98	48.126	Ovis_aries
ENSDARG00000052344	tbl3	88	53.008	ENSPPAG00000041939	TBL3	97	51.980	Pan_paniscus
ENSDARG00000052344	tbl3	88	53.817	ENSPPRG00000000893	TBL3	98	53.817	Panthera_pardus
ENSDARG00000052344	tbl3	88	53.846	ENSPTIG00000010377	TBL3	98	53.092	Panthera_tigris_altaica
ENSDARG00000052344	tbl3	88	53.133	ENSPTRG00000007621	TBL3	97	52.104	Pan_troglodytes
ENSDARG00000052344	tbl3	88	52.882	ENSPANG00000007024	TBL3	97	51.856	Papio_anubis
ENSDARG00000052344	tbl3	92	62.002	ENSPKIG00000000136	tbl3	91	61.399	Paramormyrops_kingsleyae
ENSDARG00000052344	tbl3	88	56.101	ENSPSIG00000013024	TBL3	98	55.597	Pelodiscus_sinensis
ENSDARG00000052344	tbl3	88	66.119	ENSPMGG00000020660	tbl3	96	65.696	Periophthalmus_magnuspinnatus
ENSDARG00000052344	tbl3	88	54.088	ENSPEMG00000009768	Tbl3	98	53.924	Peromyscus_maniculatus_bairdii
ENSDARG00000052344	tbl3	84	47.238	ENSPMAG00000004860	tbl3	97	47.188	Petromyzon_marinus
ENSDARG00000052344	tbl3	89	54.177	ENSPCIG00000021811	TBL3	99	54.054	Phascolarctos_cinereus
ENSDARG00000052344	tbl3	95	65.228	ENSPFOG00000009834	tbl3	90	66.667	Poecilia_formosa
ENSDARG00000052344	tbl3	95	65.076	ENSPLAG00000016437	tbl3	90	66.506	Poecilia_latipinna
ENSDARG00000052344	tbl3	95	65.228	ENSPMEG00000019513	tbl3	90	66.667	Poecilia_mexicana
ENSDARG00000052344	tbl3	88	53.258	ENSPPYG00000006977	TBL3	97	52.228	Pongo_abelii
ENSDARG00000052344	tbl3	88	54.193	ENSPCOG00000019749	TBL3	97	54.010	Propithecus_coquereli
ENSDARG00000052344	tbl3	88	54.795	ENSPVAG00000016710	TBL3	98	54.545	Pteropus_vampyrus
ENSDARG00000052344	tbl3	87	65.228	ENSPNYG00000017137	tbl3	98	64.848	Pundamilia_nyererei
ENSDARG00000052344	tbl3	92	69.287	ENSPNAG00000017527	tbl3	98	67.912	Pygocentrus_nattereri
ENSDARG00000052344	tbl3	88	54.443	ENSRNOG00000013429	Tbl3	98	54.318	Rattus_norvegicus
ENSDARG00000052344	tbl3	88	49.438	ENSRBIG00000032982	TBL3	96	48.459	Rhinopithecus_bieti
ENSDARG00000052344	tbl3	88	53.133	ENSRROG00000026697	TBL3	97	52.104	Rhinopithecus_roxellana
ENSDARG00000052344	tbl3	88	54.030	ENSSBOG00000013923	TBL3	97	52.970	Saimiri_boliviensis_boliviensis
ENSDARG00000052344	tbl3	90	54.534	ENSSHAG00000015266	TBL3	99	54.412	Sarcophilus_harrisii
ENSDARG00000052344	tbl3	93	62.752	ENSSFOG00015023537	tbl3	89	62.635	Scleropages_formosus
ENSDARG00000052344	tbl3	96	63.861	ENSSMAG00000014338	tbl3	99	67.084	Scophthalmus_maximus
ENSDARG00000052344	tbl3	95	64.171	ENSSDUG00000008158	tbl3	88	66.748	Seriola_dumerili
ENSDARG00000052344	tbl3	95	64.203	ENSSLDG00000023733	tbl3	99	66.914	Seriola_lalandi_dorsalis
ENSDARG00000052344	tbl3	88	40.675	ENSSPUG00000012939	TBL3	99	51.095	Sphenodon_punctatus
ENSDARG00000052344	tbl3	97	63.544	ENSSPAG00000010659	tbl3	95	64.155	Stegastes_partitus
ENSDARG00000052344	tbl3	88	52.941	ENSSSCG00000037686	TBL3	98	51.916	Sus_scrofa
ENSDARG00000052344	tbl3	88	55.319	ENSTGUG00000006592	-	99	54.944	Taeniopygia_guttata
ENSDARG00000052344	tbl3	93	64.303	ENSTRUG00000007010	tbl3	90	64.904	Takifugu_rubripes
ENSDARG00000052344	tbl3	93	64.397	ENSTNIG00000018011	tbl3	99	65.461	Tetraodon_nigroviridis
ENSDARG00000052344	tbl3	88	52.691	ENSTTRG00000011395	TBL3	97	52.691	Tursiops_truncatus
ENSDARG00000052344	tbl3	88	54.078	ENSUAMG00000019276	TBL3	97	52.847	Ursus_americanus
ENSDARG00000052344	tbl3	88	52.075	ENSUMAG00000022149	TBL3	96	50.932	Ursus_maritimus
ENSDARG00000052344	tbl3	88	52.882	ENSVVUG00000009589	TBL3	97	51.980	Vulpes_vulpes
ENSDARG00000052344	tbl3	89	51.429	ENSXETG00000007217	tbl3	96	51.298	Xenopus_tropicalis
ENSDARG00000052344	tbl3	89	66.916	ENSXCOG00000010277	tbl3	99	66.087	Xiphophorus_couchianus
ENSDARG00000052344	tbl3	95	64.494	ENSXMAG00000014866	tbl3	92	66.354	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0006364	rRNA processing	-	IEA	Process
GO:0010564	regulation of cell cycle process	22659140.	IMP	Process
GO:0030098	lymphocyte differentiation	18729230.	IMP	Process
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0032040	small-subunit processome	-	IEA	Component
GO:0034388	Pwp2p-containing subcomplex of 90S preribosome	21873635.	IBA	Component
GO:0048538	thymus development	18729230.	IMP	Process