EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000052575 (Gene tree)
Gene ID: 793658
Gene Symbol: arl13a
Alias: zgc:73398
Full Name: ADP-ribosylation factor-like 13A
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 15452 bases
Position: chr14:41293110-41308561
Accession: ZDB-GENE-040426-1790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000120899	MMR_HSR1	PF01926.23	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000138232	-	1991	XM_005173309	ENSDARP00000120899	434 (aa)	XP_005173366	F1QKW5
ENSDART00000138917	-	785	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000052575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000052575's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000052575	arl13a	50	47.005	ENSDARG00000012763	arl13b	86	46.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000052575	arl13a	93	66.585	ENSACIG00000012235	arl13a	99	65.281	Amphilophus_citrinellus
ENSDARG00000052575	arl13a	95	63.357	ENSAOCG00000024309	arl13a	96	63.357	Amphiprion_ocellaris
ENSDARG00000052575	arl13a	99	65.611	ENSAPEG00000006626	arl13a	99	65.837	Amphiprion_percula
ENSDARG00000052575	arl13a	99	64.430	ENSATEG00000018113	arl13a	99	65.766	Anabas_testudineus
ENSDARG00000052575	arl13a	93	69.100	ENSACLG00000000738	arl13a	99	67.640	Astatotilapia_calliptera
ENSDARG00000052575	arl13a	94	64.269	ENSAMXG00000021495	arl13a	99	63.309	Astyanax_mexicanus
ENSDARG00000052575	arl13a	93	55.635	ENSCSEG00000002533	arl13a	99	53.380	Cynoglossus_semilaevis
ENSDARG00000052575	arl13a	99	69.161	ENSCVAG00000005783	arl13a	99	68.027	Cyprinodon_variegatus
ENSDARG00000052575	arl13a	99	67.574	ENSFHEG00000017023	arl13a	99	67.347	Fundulus_heteroclitus
ENSDARG00000052575	arl13a	99	67.347	ENSGAFG00000019994	arl13a	99	67.120	Gambusia_affinis
ENSDARG00000052575	arl13a	93	63.659	ENSGACG00000017318	arl13a	99	62.836	Gasterosteus_aculeatus
ENSDARG00000052575	arl13a	99	68.552	ENSHBUG00000016100	arl13a	99	67.195	Haplochromis_burtoni
ENSDARG00000052575	arl13a	93	61.687	ENSHCOG00000005206	arl13a	99	60.482	Hippocampus_comes
ENSDARG00000052575	arl13a	94	64.748	ENSIPUG00000017720	arl13a	99	64.029	Ictalurus_punctatus
ENSDARG00000052575	arl13a	99	62.217	ENSKMAG00000001139	arl13a	99	62.217	Kryptolebias_marmoratus
ENSDARG00000052575	arl13a	99	67.882	ENSLBEG00000028724	arl13a	99	67.882	Labrus_bergylta
ENSDARG00000052575	arl13a	99	54.875	ENSLOCG00000015307	arl13a	99	55.000	Lepisosteus_oculatus
ENSDARG00000052575	arl13a	93	64.200	ENSMAMG00000020385	arl13a	99	63.484	Mastacembelus_armatus
ENSDARG00000052575	arl13a	99	68.552	ENSMZEG00005007052	arl13a	99	67.711	Maylandia_zebra
ENSDARG00000052575	arl13a	93	59.658	ENSMMOG00000000880	arl13a	99	59.012	Mola_mola
ENSDARG00000052575	arl13a	53	76.419	ENSMALG00000009029	arl13a	99	58.519	Monopterus_albus
ENSDARG00000052575	arl13a	93	69.586	ENSNBRG00000021766	arl13a	99	68.370	Neolamprologus_brichardi
ENSDARG00000052575	arl13a	93	69.398	ENSONIG00000002645	arl13a	99	67.470	Oreochromis_niloticus
ENSDARG00000052575	arl13a	99	65.914	ENSORLG00000001425	arl13a	99	65.837	Oryzias_latipes
ENSDARG00000052575	arl13a	99	65.611	ENSORLG00020021844	arl13a	99	66.063	Oryzias_latipes_hni
ENSDARG00000052575	arl13a	99	66.140	ENSORLG00015011862	arl13a	99	66.747	Oryzias_latipes_hsok
ENSDARG00000052575	arl13a	99	66.667	ENSOMEG00000015603	arl13a	99	66.667	Oryzias_melastigma
ENSDARG00000052575	arl13a	99	56.000	ENSPKIG00000013558	arl13a	99	55.034	Paramormyrops_kingsleyae
ENSDARG00000052575	arl13a	52	50.446	ENSPSIG00000003515	ARL13A	100	50.446	Pelodiscus_sinensis
ENSDARG00000052575	arl13a	93	61.481	ENSPMGG00000017973	arl13a	99	60.494	Periophthalmus_magnuspinnatus
ENSDARG00000052575	arl13a	99	65.079	ENSPFOG00000016707	arl13a	99	65.533	Poecilia_formosa
ENSDARG00000052575	arl13a	93	63.171	ENSPLAG00000011307	arl13a	99	64.146	Poecilia_latipinna
ENSDARG00000052575	arl13a	99	66.893	ENSPMEG00000017855	arl13a	99	67.347	Poecilia_mexicana
ENSDARG00000052575	arl13a	99	67.347	ENSPREG00000011435	arl13a	99	67.347	Poecilia_reticulata
ENSDARG00000052575	arl13a	93	69.100	ENSPNYG00000011485	arl13a	99	67.640	Pundamilia_nyererei
ENSDARG00000052575	arl13a	93	61.017	ENSSFOG00015010065	arl13a	99	61.650	Scleropages_formosus
ENSDARG00000052575	arl13a	93	62.592	ENSSMAG00000013557	arl13a	99	60.145	Scophthalmus_maximus
ENSDARG00000052575	arl13a	93	61.235	ENSSDUG00000000933	arl13a	99	61.481	Seriola_dumerili
ENSDARG00000052575	arl13a	99	66.818	ENSSLDG00000009973	arl13a	99	66.364	Seriola_lalandi_dorsalis
ENSDARG00000052575	arl13a	74	79.279	ENSSPAG00000009109	arl13a	87	77.056	Stegastes_partitus
ENSDARG00000052575	arl13a	94	64.734	ENSXCOG00000016270	arl13a	99	65.459	Xiphophorus_couchianus
ENSDARG00000052575	arl13a	99	66.667	ENSXMAG00000013485	arl13a	99	67.347	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005929	cilium	21873635.	IBA	Component
GO:0060170	ciliary membrane	21873635.	IBA	Component
GO:0097500	receptor localization to non-motile cilium	21873635.	IBA	Process
GO:0097730	non-motile cilium	21873635.	IBA	Component
GO:1905515	non-motile cilium assembly	21873635.	IBA	Process