EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSDARG00000052677 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-138g9.2
Alias: -
Full Name: si:ch211-138g9.2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 4121 bases
Position: chr1:46026457-46030577
Accession: ZDB-GENE-090311-41
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000122867	RIO1	PF01163.22	0.00044	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000132705	-	2092	-	ENSDARP00000122867	543 (aa)	-	F1QQS4

Gene Model

Click here to download ENSDARG00000052677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000052677's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000052677	si:ch211-138g9.2	50	95.941	ENSDARG00000070692	si:dkey-80c24.1	100	95.941
ENSDARG00000052677	si:ch211-138g9.2	50	95.941	ENSDARG00000092501	si:dkey-80c24.5	100	95.941
ENSDARG00000052677	si:ch211-138g9.2	72	90.281	ENSDARG00000097997	si:ch211-272b8.7	100	90.281
ENSDARG00000052677	si:ch211-138g9.2	99	70.508	ENSDARG00000095927	si:ch211-57m13.1	96	71.186
ENSDARG00000052677	si:ch211-138g9.2	99	90.221	ENSDARG00000078558	si:dkey-22i16.10	91	92.066
ENSDARG00000052677	si:ch211-138g9.2	99	90.406	ENSDARG00000101352	si:dkey-34d22.3	90	97.425
ENSDARG00000052677	si:ch211-138g9.2	51	85.560	ENSDARG00000113513	si:dkeyp-67e1.6	99	85.560
ENSDARG00000052677	si:ch211-138g9.2	51	97.842	ENSDARG00000094491	si:ch211-202m22.1	99	97.842
ENSDARG00000052677	si:ch211-138g9.2	99	90.590	ENSDARG00000053340	si:ch211-138g9.3	89	92.435
ENSDARG00000052677	si:ch211-138g9.2	51	85.921	ENSDARG00000073947	si:dkeyp-67e1.6	99	85.921