EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000052701 (Gene tree)
Gene ID: 797914
Gene Symbol: smpd2b
Alias: zmp:0000000637
Full Name: sphingomyelin phosphodiesterase 2b%2C neutral membrane (neutral sphingomyelinase)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 24321 bases
Position: chr6:54680730-54705050
Accession: ZDB-GENE-130530-640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000154779	Exo_endo_phos	PF03372.23	5e-17	1	1
ENSDARP00000069090	Exo_endo_phos	PF03372.23	5.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000189514	-	1281	-	ENSDARP00000154779	426 (aa)	-	A0A2R8QPP6
ENSDART00000074602	-	4524	XM_001338333	ENSDARP00000069090	436 (aa)	XP_001338369	E7FBR1

Gene Model

Click here to download ENSDARG00000052701's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre00600	Sphingolipid metabolism	KEGG
dre01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000052701's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000052701	smpd2b	94	55.335	ENSDARG00000040523	smpd2a	93	54.839

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000052701	smpd2b	73	49.375	ENSG00000135587	SMPD2	75	49.375	Homo_sapiens
ENSDARG00000052701	smpd2b	73	49.527	ENSAMEG00000016431	SMPD2	94	44.118	Ailuropoda_melanoleuca
ENSDARG00000052701	smpd2b	97	68.246	ENSACIG00000010069	smpd2b	99	68.810	Amphilophus_citrinellus
ENSDARG00000052701	smpd2b	95	67.303	ENSAOCG00000014544	smpd2b	95	67.303	Amphiprion_ocellaris
ENSDARG00000052701	smpd2b	95	67.303	ENSAPEG00000023764	smpd2b	95	67.303	Amphiprion_percula
ENSDARG00000052701	smpd2b	95	66.110	ENSATEG00000025113	smpd2b	95	66.110	Anabas_testudineus
ENSDARG00000052701	smpd2b	91	52.658	ENSACAG00000009270	SMPD2	97	53.197	Anolis_carolinensis
ENSDARG00000052701	smpd2b	73	49.686	ENSANAG00000028732	SMPD2	75	49.686	Aotus_nancymaae
ENSDARG00000052701	smpd2b	95	67.464	ENSACLG00000022892	smpd2b	94	67.464	Astatotilapia_calliptera
ENSDARG00000052701	smpd2b	97	71.021	ENSAMXG00000013614	smpd2b	98	71.259	Astyanax_mexicanus
ENSDARG00000052701	smpd2b	71	49.196	ENSBTAG00000008145	SMPD2	64	42.145	Bos_taurus
ENSDARG00000052701	smpd2b	90	36.973	WBGene00012105	T27F6.6	66	44.138	Caenorhabditis_elegans
ENSDARG00000052701	smpd2b	73	48.580	ENSCJAG00000005756	SMPD2	75	48.580	Callithrix_jacchus
ENSDARG00000052701	smpd2b	96	42.105	ENSCAFG00000003816	SMPD2	97	43.675	Canis_familiaris
ENSDARG00000052701	smpd2b	73	48.896	ENSCHIG00000022563	SMPD2	94	42.015	Capra_hircus
ENSDARG00000052701	smpd2b	73	50.473	ENSTSYG00000008525	SMPD2	75	50.473	Carlito_syrichta
ENSDARG00000052701	smpd2b	55	50.628	ENSCAPG00000008057	SMPD2	91	41.641	Cavia_aperea
ENSDARG00000052701	smpd2b	73	50.000	ENSCPOG00000003102	SMPD2	93	42.927	Cavia_porcellus
ENSDARG00000052701	smpd2b	73	50.000	ENSCCAG00000036357	SMPD2	75	50.000	Cebus_capucinus
ENSDARG00000052701	smpd2b	73	50.158	ENSCATG00000015266	SMPD2	94	43.243	Cercocebus_atys
ENSDARG00000052701	smpd2b	65	54.480	ENSCLAG00000009948	SMPD2	61	54.480	Chinchilla_lanigera
ENSDARG00000052701	smpd2b	73	50.158	ENSCSAG00000015322	SMPD2	75	50.158	Chlorocebus_sabaeus
ENSDARG00000052701	smpd2b	94	56.650	ENSCPBG00000017837	SMPD2	99	56.650	Chrysemys_picta_bellii
ENSDARG00000052701	smpd2b	73	49.842	ENSCANG00000029491	SMPD2	75	49.842	Colobus_angolensis_palliatus
ENSDARG00000052701	smpd2b	92	44.279	ENSCGRG00001019999	Smpd2	93	44.110	Cricetulus_griseus_chok1gshd
ENSDARG00000052701	smpd2b	92	44.279	ENSCGRG00000008928	Smpd2	93	44.110	Cricetulus_griseus_crigri
ENSDARG00000052701	smpd2b	98	66.512	ENSCSEG00000016030	smpd2b	97	66.512	Cynoglossus_semilaevis
ENSDARG00000052701	smpd2b	95	65.321	ENSCVAG00000020815	smpd2b	95	65.321	Cyprinodon_variegatus
ENSDARG00000052701	smpd2b	72	50.316	ENSDNOG00000003948	SMPD2	73	50.482	Dasypus_novemcinctus
ENSDARG00000052701	smpd2b	73	51.724	ENSDORG00000006485	Smpd2	75	51.724	Dipodomys_ordii
ENSDARG00000052701	smpd2b	66	36.610	FBgn0035421	CG12034	66	36.424	Drosophila_melanogaster
ENSDARG00000052701	smpd2b	94	49.048	ENSEBUG00000002962	smpd2b	97	49.048	Eptatretus_burgeri
ENSDARG00000052701	smpd2b	73	51.104	ENSEASG00005006484	SMPD2	75	51.097	Equus_asinus_asinus
ENSDARG00000052701	smpd2b	73	51.411	ENSECAG00000016972	SMPD2	75	51.411	Equus_caballus
ENSDARG00000052701	smpd2b	98	67.749	ENSELUG00000021534	smpd2b	98	67.749	Esox_lucius
ENSDARG00000052701	smpd2b	94	42.998	ENSFCAG00000006358	SMPD2	94	44.608	Felis_catus
ENSDARG00000052701	smpd2b	94	55.556	ENSFALG00000003639	SMPD2	99	55.556	Ficedula_albicollis
ENSDARG00000052701	smpd2b	95	67.308	ENSFHEG00000017395	smpd2b	95	67.308	Fundulus_heteroclitus
ENSDARG00000052701	smpd2b	94	59.950	ENSGMOG00000015239	smpd2b	96	59.950	Gadus_morhua
ENSDARG00000052701	smpd2b	94	53.333	ENSGALG00000033245	SMPD2	99	53.333	Gallus_gallus
ENSDARG00000052701	smpd2b	95	67.548	ENSGAFG00000016345	smpd2b	95	67.548	Gambusia_affinis
ENSDARG00000052701	smpd2b	95	65.625	ENSGACG00000005132	smpd2b	96	65.625	Gasterosteus_aculeatus
ENSDARG00000052701	smpd2b	94	57.778	ENSGAGG00000023942	SMPD2	99	57.778	Gopherus_agassizii
ENSDARG00000052701	smpd2b	73	49.375	ENSGGOG00000003394	SMPD2	75	49.375	Gorilla_gorilla
ENSDARG00000052701	smpd2b	65	53.818	ENSHGLG00000000226	SMPD2	65	53.818	Heterocephalus_glaber_female
ENSDARG00000052701	smpd2b	65	53.818	ENSHGLG00100016698	SMPD2	65	53.818	Heterocephalus_glaber_male
ENSDARG00000052701	smpd2b	95	63.942	ENSHCOG00000001358	smpd2b	96	63.942	Hippocampus_comes
ENSDARG00000052701	smpd2b	99	49.169	ENSIPUG00000017284	smpd2a	99	48.931	Ictalurus_punctatus
ENSDARG00000052701	smpd2b	97	72.143	ENSIPUG00000024794	smpd2b	98	72.143	Ictalurus_punctatus
ENSDARG00000052701	smpd2b	98	42.890	ENSSTOG00000028661	SMPD2	100	42.424	Ictidomys_tridecemlineatus
ENSDARG00000052701	smpd2b	96	42.344	ENSJJAG00000019368	Smpd2	98	42.005	Jaculus_jaculus
ENSDARG00000052701	smpd2b	96	69.756	ENSKMAG00000015753	smpd2b	97	69.756	Kryptolebias_marmoratus
ENSDARG00000052701	smpd2b	97	66.988	ENSLBEG00000024878	smpd2b	97	66.988	Labrus_bergylta
ENSDARG00000052701	smpd2b	92	60.957	ENSLACG00000016351	smpd2b	97	60.957	Latimeria_chalumnae
ENSDARG00000052701	smpd2b	95	65.942	ENSLOCG00000009741	smpd2b	96	65.942	Lepisosteus_oculatus
ENSDARG00000052701	smpd2b	73	47.170	ENSLAFG00000003298	SMPD2	96	41.667	Loxodonta_africana
ENSDARG00000052701	smpd2b	73	50.158	ENSMFAG00000033236	SMPD2	75	50.158	Macaca_fascicularis
ENSDARG00000052701	smpd2b	73	50.158	ENSMNEG00000042401	SMPD2	75	50.158	Macaca_nemestrina
ENSDARG00000052701	smpd2b	61	50.373	ENSMLEG00000039457	SMPD2	72	50.373	Mandrillus_leucophaeus
ENSDARG00000052701	smpd2b	95	65.632	ENSMAMG00000004710	smpd2b	95	65.632	Mastacembelus_armatus
ENSDARG00000052701	smpd2b	95	67.464	ENSMZEG00005002958	smpd2b	94	67.464	Maylandia_zebra
ENSDARG00000052701	smpd2b	94	52.696	ENSMGAG00000006821	SMPD2	99	52.696	Meleagris_gallopavo
ENSDARG00000052701	smpd2b	77	48.214	ENSMAUG00000008721	Smpd2	93	44.472	Mesocricetus_auratus
ENSDARG00000052701	smpd2b	73	50.158	ENSMICG00000014442	SMPD2	98	42.488	Microcebus_murinus
ENSDARG00000052701	smpd2b	73	48.896	ENSMOCG00000019666	Smpd2	94	43.719	Microtus_ochrogaster
ENSDARG00000052701	smpd2b	94	66.418	ENSMMOG00000012679	smpd2b	94	66.418	Mola_mola
ENSDARG00000052701	smpd2b	94	42.857	ENSMODG00000017971	SMPD2	93	43.095	Monodelphis_domestica
ENSDARG00000052701	smpd2b	98	64.733	ENSMALG00000000267	smpd2b	99	65.952	Monopterus_albus
ENSDARG00000052701	smpd2b	92	43.970	MGP_CAROLIEiJ_G0015268	Smpd2	93	43.719	Mus_caroli
ENSDARG00000052701	smpd2b	92	44.221	ENSMUSG00000019822	Smpd2	93	43.970	Mus_musculus
ENSDARG00000052701	smpd2b	90	43.990	MGP_PahariEiJ_G0030686	Smpd2	91	43.734	Mus_pahari
ENSDARG00000052701	smpd2b	92	44.221	MGP_SPRETEiJ_G0016077	Smpd2	93	44.221	Mus_spretus
ENSDARG00000052701	smpd2b	96	42.373	ENSMPUG00000010005	SMPD2	96	43.341	Mustela_putorius_furo
ENSDARG00000052701	smpd2b	72	50.160	ENSMLUG00000003793	SMPD2	94	42.506	Myotis_lucifugus
ENSDARG00000052701	smpd2b	57	55.967	ENSNGAG00000013670	Smpd2	92	55.967	Nannospalax_galili
ENSDARG00000052701	smpd2b	92	67.494	ENSNBRG00000008403	smpd2b	93	67.494	Neolamprologus_brichardi
ENSDARG00000052701	smpd2b	73	50.000	ENSNLEG00000012570	SMPD2	75	50.000	Nomascus_leucogenys
ENSDARG00000052701	smpd2b	94	41.951	ENSMEUG00000004602	SMPD2	95	41.951	Notamacropus_eugenii
ENSDARG00000052701	smpd2b	73	47.950	ENSOPRG00000012612	SMPD2	74	47.950	Ochotona_princeps
ENSDARG00000052701	smpd2b	98	65.814	ENSONIG00000014702	smpd2b	97	65.814	Oreochromis_niloticus
ENSDARG00000052701	smpd2b	78	48.235	ENSOCUG00000008607	SMPD2	94	43.489	Oryctolagus_cuniculus
ENSDARG00000052701	smpd2b	95	65.714	ENSORLG00000006334	smpd2b	95	65.714	Oryzias_latipes
ENSDARG00000052701	smpd2b	95	66.033	ENSORLG00020015231	smpd2b	95	66.033	Oryzias_latipes_hni
ENSDARG00000052701	smpd2b	95	65.714	ENSORLG00015010424	smpd2b	94	65.714	Oryzias_latipes_hsok
ENSDARG00000052701	smpd2b	95	66.348	ENSOMEG00000016121	smpd2b	95	66.348	Oryzias_melastigma
ENSDARG00000052701	smpd2b	94	43.243	ENSOGAG00000015505	SMPD2	94	42.998	Otolemur_garnettii
ENSDARG00000052701	smpd2b	72	44.654	ENSOARG00000010409	SMPD2	94	38.406	Ovis_aries
ENSDARG00000052701	smpd2b	73	49.688	ENSPPAG00000031363	SMPD2	75	49.688	Pan_paniscus
ENSDARG00000052701	smpd2b	73	49.527	ENSPPRG00000000099	SMPD2	75	49.527	Panthera_pardus
ENSDARG00000052701	smpd2b	73	49.527	ENSPTIG00000008954	SMPD2	75	49.527	Panthera_tigris_altaica
ENSDARG00000052701	smpd2b	73	49.688	ENSPTRG00000018484	SMPD2	75	49.688	Pan_troglodytes
ENSDARG00000052701	smpd2b	73	50.158	ENSPANG00000024480	SMPD2	75	50.158	Papio_anubis
ENSDARG00000052701	smpd2b	95	65.707	ENSPKIG00000011322	smpd2a	92	65.707	Paramormyrops_kingsleyae
ENSDARG00000052701	smpd2b	90	67.092	ENSPMGG00000000230	smpd2b	94	67.268	Periophthalmus_magnuspinnatus
ENSDARG00000052701	smpd2b	77	49.405	ENSPEMG00000018109	Smpd2	80	49.849	Peromyscus_maniculatus_bairdii
ENSDARG00000052701	smpd2b	75	51.064	ENSPMAG00000002460	smpd2b	93	51.852	Petromyzon_marinus
ENSDARG00000052701	smpd2b	93	45.366	ENSPCIG00000005984	SMPD2	93	45.366	Phascolarctos_cinereus
ENSDARG00000052701	smpd2b	98	66.667	ENSPFOG00000014164	smpd2b	97	66.667	Poecilia_formosa
ENSDARG00000052701	smpd2b	98	66.667	ENSPLAG00000014950	smpd2b	97	66.667	Poecilia_latipinna
ENSDARG00000052701	smpd2b	98	66.901	ENSPMEG00000002286	smpd2b	97	66.901	Poecilia_mexicana
ENSDARG00000052701	smpd2b	95	67.548	ENSPREG00000012181	smpd2b	95	67.548	Poecilia_reticulata
ENSDARG00000052701	smpd2b	72	49.051	ENSPPYG00000016908	-	54	49.839	Pongo_abelii
ENSDARG00000052701	smpd2b	73	49.211	ENSPCAG00000011808	SMPD2	76	49.211	Procavia_capensis
ENSDARG00000052701	smpd2b	73	51.104	ENSPCOG00000001714	SMPD2	75	51.104	Propithecus_coquereli
ENSDARG00000052701	smpd2b	96	42.721	ENSPVAG00000006556	SMPD2	97	42.721	Pteropus_vampyrus
ENSDARG00000052701	smpd2b	95	68.293	ENSPNYG00000005567	smpd2b	94	68.293	Pundamilia_nyererei
ENSDARG00000052701	smpd2b	100	71.789	ENSPNAG00000007986	smpd2b	99	71.789	Pygocentrus_nattereri
ENSDARG00000052701	smpd2b	93	42.857	ENSRNOG00000000306	Smpd2	93	42.893	Rattus_norvegicus
ENSDARG00000052701	smpd2b	73	50.158	ENSRBIG00000033388	SMPD2	75	50.158	Rhinopithecus_bieti
ENSDARG00000052701	smpd2b	73	50.158	ENSRROG00000037705	SMPD2	75	50.158	Rhinopithecus_roxellana
ENSDARG00000052701	smpd2b	73	49.211	ENSSBOG00000033929	SMPD2	99	40.984	Saimiri_boliviensis_boliviensis
ENSDARG00000052701	smpd2b	95	66.587	ENSSFOG00015022890	smpd2	95	66.587	Scleropages_formosus
ENSDARG00000052701	smpd2b	98	64.815	ENSSMAG00000008963	smpd2b	98	64.815	Scophthalmus_maximus
ENSDARG00000052701	smpd2b	95	65.871	ENSSDUG00000000098	smpd2b	95	65.871	Seriola_dumerili
ENSDARG00000052701	smpd2b	93	68.750	ENSSLDG00000009497	smpd2b	95	66.348	Seriola_lalandi_dorsalis
ENSDARG00000052701	smpd2b	73	50.311	ENSSARG00000006192	SMPD2	75	50.311	Sorex_araneus
ENSDARG00000052701	smpd2b	94	53.883	ENSSPUG00000013852	SMPD2	99	53.883	Sphenodon_punctatus
ENSDARG00000052701	smpd2b	95	66.826	ENSSPAG00000001844	smpd2b	95	66.826	Stegastes_partitus
ENSDARG00000052701	smpd2b	73	49.527	ENSSSCG00000004408	SMPD2	75	49.527	Sus_scrofa
ENSDARG00000052701	smpd2b	93	52.736	ENSTGUG00000001713	SMPD2	99	52.736	Taeniopygia_guttata
ENSDARG00000052701	smpd2b	95	64.096	ENSTRUG00000025701	smpd2b	96	64.096	Takifugu_rubripes
ENSDARG00000052701	smpd2b	94	66.169	ENSTNIG00000018297	smpd2b	100	66.169	Tetraodon_nigroviridis
ENSDARG00000052701	smpd2b	73	50.789	ENSTBEG00000009336	SMPD2	75	50.789	Tupaia_belangeri
ENSDARG00000052701	smpd2b	73	44.795	ENSTTRG00000004183	SMPD2	94	39.803	Tursiops_truncatus
ENSDARG00000052701	smpd2b	73	49.842	ENSUAMG00000018011	SMPD2	94	44.363	Ursus_americanus
ENSDARG00000052701	smpd2b	65	48.057	ENSUMAG00000025505	SMPD2	88	43.127	Ursus_maritimus
ENSDARG00000052701	smpd2b	81	47.851	ENSXETG00000000421	smpd2	99	45.477	Xenopus_tropicalis
ENSDARG00000052701	smpd2b	94	66.917	ENSXCOG00000015987	smpd2b	95	66.917	Xiphophorus_couchianus
ENSDARG00000052701	smpd2b	98	65.023	ENSXMAG00000018088	smpd2b	97	65.023	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component