EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000052747 (Gene tree)
Gene ID: 791148
Gene Symbol: gpatch3
Alias: zgc:158863
Full Name: G patch domain containing 3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 11017 bases
Position: chr16:53590586-53601602
Accession: ZDB-GENE-070112-902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000077969	G-patch	PF01585.23	2.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000083534	-	2166	XM_005158454	ENSDARP00000077969	669 (aa)	XP_005158511	F1QG49

Gene Model

Click here to download ENSDARG00000052747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000052747's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000052747	gpatch3	67	68.720	ENSG00000198746	GPATCH3	96	65.164	Homo_sapiens
ENSDARG00000052747	gpatch3	67	82.212	ENSAPOG00000001212	gpatch3	95	81.567	Acanthochromis_polyacanthus
ENSDARG00000052747	gpatch3	71	66.527	ENSAMEG00000010801	GPATCH3	96	66.527	Ailuropoda_melanoleuca
ENSDARG00000052747	gpatch3	66	81.951	ENSAOCG00000019352	gpatch3	97	67.883	Amphiprion_ocellaris
ENSDARG00000052747	gpatch3	66	81.951	ENSAPEG00000018926	gpatch3	96	81.567	Amphiprion_percula
ENSDARG00000052747	gpatch3	64	79.024	ENSATEG00000023759	gpatch3	89	78.802	Anabas_testudineus
ENSDARG00000052747	gpatch3	53	63.736	ENSAPLG00000010745	GPATCH3	90	71.429	Anas_platyrhynchos
ENSDARG00000052747	gpatch3	68	66.957	ENSACAG00000016709	GPATCH3	88	70.233	Anolis_carolinensis
ENSDARG00000052747	gpatch3	67	67.925	ENSANAG00000035944	GPATCH3	97	64.898	Aotus_nancymaae
ENSDARG00000052747	gpatch3	72	76.419	ENSACLG00000012807	gpatch3	94	78.341	Astatotilapia_calliptera
ENSDARG00000052747	gpatch3	73	73.123	ENSAMXG00000034582	gpatch3	97	73.123	Astyanax_mexicanus
ENSDARG00000052747	gpatch3	68	68.981	ENSBTAG00000014849	GPATCH3	95	66.946	Bos_taurus
ENSDARG00000052747	gpatch3	64	41.700	WBGene00019467	K07B1.7	89	42.353	Caenorhabditis_elegans
ENSDARG00000052747	gpatch3	67	68.396	ENSCJAG00000010000	GPATCH3	95	65.306	Callithrix_jacchus
ENSDARG00000052747	gpatch3	68	69.444	ENSCAFG00000012265	GPATCH3	96	65.844	Canis_familiaris
ENSDARG00000052747	gpatch3	68	69.444	ENSCAFG00020021640	GPATCH3	96	65.844	Canis_lupus_dingo
ENSDARG00000052747	gpatch3	68	68.056	ENSCHIG00000024245	GPATCH3	90	68.056	Capra_hircus
ENSDARG00000052747	gpatch3	66	68.720	ENSTSYG00000011753	GPATCH3	95	65.984	Carlito_syrichta
ENSDARG00000052747	gpatch3	66	70.698	ENSCPOG00000010404	GPATCH3	90	70.698	Cavia_porcellus
ENSDARG00000052747	gpatch3	67	67.453	ENSCCAG00000030482	GPATCH3	97	64.490	Cebus_capucinus
ENSDARG00000052747	gpatch3	67	68.720	ENSCATG00000033598	GPATCH3	96	65.574	Cercocebus_atys
ENSDARG00000052747	gpatch3	65	70.183	ENSCLAG00000012064	GPATCH3	95	67.647	Chinchilla_lanigera
ENSDARG00000052747	gpatch3	73	58.966	ENSCPBG00000024968	GPATCH3	86	71.889	Chrysemys_picta_bellii
ENSDARG00000052747	gpatch3	67	67.773	ENSCANG00000036795	GPATCH3	96	65.164	Colobus_angolensis_palliatus
ENSDARG00000052747	gpatch3	67	70.142	ENSCGRG00001002930	Gpatch3	96	61.538	Cricetulus_griseus_chok1gshd
ENSDARG00000052747	gpatch3	67	70.142	ENSCGRG00000004699	Gpatch3	96	61.538	Cricetulus_griseus_crigri
ENSDARG00000052747	gpatch3	67	79.439	ENSCSEG00000005277	gpatch3	91	78.802	Cynoglossus_semilaevis
ENSDARG00000052747	gpatch3	74	79.245	ENSCVAG00000000827	gpatch3	93	79.245	Cyprinodon_variegatus
ENSDARG00000052747	gpatch3	65	70.142	ENSDNOG00000016999	GPATCH3	95	68.067	Dasypus_novemcinctus
ENSDARG00000052747	gpatch3	64	59.740	ENSEBUG00000013911	gpatch3	79	62.911	Eptatretus_burgeri
ENSDARG00000052747	gpatch3	68	69.907	ENSEASG00005008636	GPATCH3	96	66.393	Equus_asinus_asinus
ENSDARG00000052747	gpatch3	68	69.907	ENSECAG00000007653	GPATCH3	96	66.393	Equus_caballus
ENSDARG00000052747	gpatch3	69	75.000	ENSELUG00000000963	gpatch3	95	75.000	Esox_lucius
ENSDARG00000052747	gpatch3	68	69.907	ENSFCAG00000012819	GPATCH3	93	69.907	Felis_catus
ENSDARG00000052747	gpatch3	66	69.907	ENSFDAG00000016270	GPATCH3	91	69.907	Fukomys_damarensis
ENSDARG00000052747	gpatch3	70	73.840	ENSFHEG00000015264	gpatch3	92	78.873	Fundulus_heteroclitus
ENSDARG00000052747	gpatch3	66	74.886	ENSGMOG00000000991	gpatch3	90	74.886	Gadus_morhua
ENSDARG00000052747	gpatch3	73	60.806	ENSGALG00000000881	GPATCH3	92	60.806	Gallus_gallus
ENSDARG00000052747	gpatch3	78	70.270	ENSGAFG00000002531	gpatch3	98	69.112	Gambusia_affinis
ENSDARG00000052747	gpatch3	69	78.899	ENSGACG00000007199	gpatch3	93	78.899	Gasterosteus_aculeatus
ENSDARG00000052747	gpatch3	75	62.271	ENSGAGG00000023286	GPATCH3	91	71.889	Gopherus_agassizii
ENSDARG00000052747	gpatch3	67	68.246	ENSGGOG00000015305	GPATCH3	96	65.164	Gorilla_gorilla
ENSDARG00000052747	gpatch3	64	78.537	ENSHBUG00000020513	gpatch3	94	78.341	Haplochromis_burtoni
ENSDARG00000052747	gpatch3	65	68.246	ENSHGLG00000012492	GPATCH3	95	66.809	Heterocephalus_glaber_female
ENSDARG00000052747	gpatch3	65	68.246	ENSHGLG00100016909	GPATCH3	95	66.809	Heterocephalus_glaber_male
ENSDARG00000052747	gpatch3	66	80.976	ENSHCOG00000005739	gpatch3	90	80.645	Hippocampus_comes
ENSDARG00000052747	gpatch3	65	81.731	ENSIPUG00000007697	gpatch3	93	86.301	Ictalurus_punctatus
ENSDARG00000052747	gpatch3	65	70.813	ENSSTOG00000015220	GPATCH3	94	67.490	Ictidomys_tridecemlineatus
ENSDARG00000052747	gpatch3	66	70.833	ENSJJAG00000003292	Gpatch3	90	70.833	Jaculus_jaculus
ENSDARG00000052747	gpatch3	67	81.250	ENSKMAG00000020717	gpatch3	93	80.184	Kryptolebias_marmoratus
ENSDARG00000052747	gpatch3	66	81.250	ENSLBEG00000007046	gpatch3	95	64.590	Labrus_bergylta
ENSDARG00000052747	gpatch3	69	69.863	ENSLACG00000011400	GPATCH3	98	48.235	Latimeria_chalumnae
ENSDARG00000052747	gpatch3	74	64.057	ENSLOCG00000003858	gpatch3	93	77.209	Lepisosteus_oculatus
ENSDARG00000052747	gpatch3	67	68.246	ENSLAFG00000016691	GPATCH3	96	66.667	Loxodonta_africana
ENSDARG00000052747	gpatch3	67	68.720	ENSMFAG00000030918	GPATCH3	96	65.574	Macaca_fascicularis
ENSDARG00000052747	gpatch3	67	68.720	ENSMMUG00000018723	GPATCH3	96	65.574	Macaca_mulatta
ENSDARG00000052747	gpatch3	51	63.462	ENSMNEG00000033889	GPATCH3	81	62.857	Macaca_nemestrina
ENSDARG00000052747	gpatch3	67	68.720	ENSMLEG00000033364	GPATCH3	96	65.574	Mandrillus_leucophaeus
ENSDARG00000052747	gpatch3	70	76.087	ENSMAMG00000023975	gpatch3	92	78.802	Mastacembelus_armatus
ENSDARG00000052747	gpatch3	72	76.419	ENSMZEG00005019731	gpatch3	94	78.341	Maylandia_zebra
ENSDARG00000052747	gpatch3	54	63.441	ENSMGAG00000000813	GPATCH3	93	63.441	Meleagris_gallopavo
ENSDARG00000052747	gpatch3	67	69.048	ENSMAUG00000002005	Gpatch3	96	65.041	Mesocricetus_auratus
ENSDARG00000052747	gpatch3	67	68.981	ENSMICG00000015656	GPATCH3	96	65.164	Microcebus_murinus
ENSDARG00000052747	gpatch3	70	65.574	ENSMOCG00000022375	Gpatch3	96	65.574	Microtus_ochrogaster
ENSDARG00000052747	gpatch3	68	70.370	ENSMODG00000014417	GPATCH3	89	70.370	Monodelphis_domestica
ENSDARG00000052747	gpatch3	67	77.876	ENSMALG00000007586	gpatch3	90	80.275	Monopterus_albus
ENSDARG00000052747	gpatch3	66	69.302	MGP_CAROLIEiJ_G0026594	Gpatch3	91	68.950	Mus_caroli
ENSDARG00000052747	gpatch3	65	68.720	ENSMUSG00000028850	Gpatch3	91	68.493	Mus_musculus
ENSDARG00000052747	gpatch3	64	68.293	MGP_PahariEiJ_G0028927	Gpatch3	95	57.000	Mus_pahari
ENSDARG00000052747	gpatch3	65	68.720	MGP_SPRETEiJ_G0027575	Gpatch3	91	68.493	Mus_spretus
ENSDARG00000052747	gpatch3	67	69.194	ENSMPUG00000015665	GPATCH3	96	66.255	Mustela_putorius_furo
ENSDARG00000052747	gpatch3	67	70.142	ENSMLUG00000023528	GPATCH3	92	70.833	Myotis_lucifugus
ENSDARG00000052747	gpatch3	65	68.095	ENSNGAG00000006821	Gpatch3	94	66.239	Nannospalax_galili
ENSDARG00000052747	gpatch3	69	59.677	ENSNBRG00000000365	gpatch3	95	59.677	Neolamprologus_brichardi
ENSDARG00000052747	gpatch3	62	67.773	ENSNLEG00000009387	GPATCH3	92	65.164	Nomascus_leucogenys
ENSDARG00000052747	gpatch3	70	66.667	ENSMEUG00000003236	GPATCH3	92	70.370	Notamacropus_eugenii
ENSDARG00000052747	gpatch3	72	66.255	ENSOPRG00000016429	GPATCH3	96	66.255	Ochotona_princeps
ENSDARG00000052747	gpatch3	66	69.302	ENSODEG00000003292	GPATCH3	94	66.809	Octodon_degus
ENSDARG00000052747	gpatch3	68	77.729	ENSONIG00000006771	gpatch3	90	79.724	Oreochromis_niloticus
ENSDARG00000052747	gpatch3	65	61.836	ENSOCUG00000006411	GPATCH3	99	61.836	Oryctolagus_cuniculus
ENSDARG00000052747	gpatch3	69	77.880	ENSORLG00000004435	gpatch3	94	77.880	Oryzias_latipes
ENSDARG00000052747	gpatch3	69	76.959	ENSORLG00020022609	gpatch3	92	76.959	Oryzias_latipes_hni
ENSDARG00000052747	gpatch3	68	77.880	ENSORLG00015008692	gpatch3	92	77.880	Oryzias_latipes_hsok
ENSDARG00000052747	gpatch3	68	80.365	ENSOMEG00000010991	gpatch3	93	80.365	Oryzias_melastigma
ENSDARG00000052747	gpatch3	68	70.370	ENSOGAG00000011647	GPATCH3	97	66.803	Otolemur_garnettii
ENSDARG00000052747	gpatch3	68	68.056	ENSOARG00000003955	GPATCH3	90	68.056	Ovis_aries
ENSDARG00000052747	gpatch3	67	68.720	ENSPPAG00000032902	GPATCH3	96	65.164	Pan_paniscus
ENSDARG00000052747	gpatch3	68	69.907	ENSPPRG00000024244	GPATCH3	93	69.907	Panthera_pardus
ENSDARG00000052747	gpatch3	68	69.907	ENSPTIG00000014693	GPATCH3	93	69.907	Panthera_tigris_altaica
ENSDARG00000052747	gpatch3	67	68.720	ENSPTRG00000023419	GPATCH3	96	65.164	Pan_troglodytes
ENSDARG00000052747	gpatch3	67	68.720	ENSPANG00000007984	GPATCH3	96	65.574	Papio_anubis
ENSDARG00000052747	gpatch3	81	63.924	ENSPKIG00000020073	gpatch3	98	63.291	Paramormyrops_kingsleyae
ENSDARG00000052747	gpatch3	54	70.283	ENSPSIG00000017160	GPATCH3	95	61.538	Pelodiscus_sinensis
ENSDARG00000052747	gpatch3	69	77.404	ENSPMGG00000001703	gpatch3	96	77.465	Periophthalmus_magnuspinnatus
ENSDARG00000052747	gpatch3	65	69.668	ENSPEMG00000020632	Gpatch3	96	66.667	Peromyscus_maniculatus_bairdii
ENSDARG00000052747	gpatch3	67	69.484	ENSPCIG00000012681	GPATCH3	91	69.907	Phascolarctos_cinereus
ENSDARG00000052747	gpatch3	68	79.263	ENSPFOG00000009928	gpatch3	93	79.263	Poecilia_formosa
ENSDARG00000052747	gpatch3	68	78.802	ENSPLAG00000023784	gpatch3	91	78.802	Poecilia_latipinna
ENSDARG00000052747	gpatch3	68	79.263	ENSPMEG00000010268	gpatch3	91	79.263	Poecilia_mexicana
ENSDARG00000052747	gpatch3	73	65.580	ENSPREG00000008873	gpatch3	96	65.580	Poecilia_reticulata
ENSDARG00000052747	gpatch3	67	68.720	ENSPPYG00000001675	GPATCH3	96	65.164	Pongo_abelii
ENSDARG00000052747	gpatch3	71	66.527	ENSPCAG00000008286	GPATCH3	96	66.946	Procavia_capensis
ENSDARG00000052747	gpatch3	68	68.519	ENSPCOG00000020145	GPATCH3	96	64.754	Propithecus_coquereli
ENSDARG00000052747	gpatch3	71	66.122	ENSPVAG00000017282	GPATCH3	96	66.531	Pteropus_vampyrus
ENSDARG00000052747	gpatch3	72	76.419	ENSPNYG00000005172	gpatch3	96	78.341	Pundamilia_nyererei
ENSDARG00000052747	gpatch3	69	80.349	ENSPNAG00000018501	gpatch3	93	80.349	Pygocentrus_nattereri
ENSDARG00000052747	gpatch3	67	68.720	ENSRNOG00000007097	Gpatch3	96	65.833	Rattus_norvegicus
ENSDARG00000052747	gpatch3	68	68.519	ENSRBIG00000005853	GPATCH3	96	64.754	Rhinopithecus_bieti
ENSDARG00000052747	gpatch3	67	67.773	ENSRROG00000038382	GPATCH3	96	65.164	Rhinopithecus_roxellana
ENSDARG00000052747	gpatch3	67	67.925	ENSSBOG00000019680	GPATCH3	98	64.898	Saimiri_boliviensis_boliviensis
ENSDARG00000052747	gpatch3	67	71.759	ENSSHAG00000014268	GPATCH3	90	71.759	Sarcophilus_harrisii
ENSDARG00000052747	gpatch3	74	78.632	ENSSFOG00015009602	gpatch3	98	82.326	Scleropages_formosus
ENSDARG00000052747	gpatch3	72	72.000	ENSSMAG00000002067	gpatch3	96	70.751	Scophthalmus_maximus
ENSDARG00000052747	gpatch3	76	71.875	ENSSDUG00000017071	gpatch3	96	80.645	Seriola_dumerili
ENSDARG00000052747	gpatch3	76	71.484	ENSSLDG00000016549	gpatch3	96	80.184	Seriola_lalandi_dorsalis
ENSDARG00000052747	gpatch3	66	71.429	ENSSPUG00000018299	GPATCH3	89	71.429	Sphenodon_punctatus
ENSDARG00000052747	gpatch3	67	82.028	ENSSPAG00000013046	gpatch3	96	82.028	Stegastes_partitus
ENSDARG00000052747	gpatch3	66	70.370	ENSSSCG00000003564	GPATCH3	88	69.863	Sus_scrofa
ENSDARG00000052747	gpatch3	52	71.090	ENSTGUG00000000986	GPATCH3	97	67.339	Taeniopygia_guttata
ENSDARG00000052747	gpatch3	68	72.926	ENSTRUG00000013294	gpatch3	88	75.576	Takifugu_rubripes
ENSDARG00000052747	gpatch3	74	65.441	ENSTNIG00000009657	gpatch3	98	64.706	Tetraodon_nigroviridis
ENSDARG00000052747	gpatch3	58	59.740	ENSTBEG00000002042	GPATCH3	81	59.740	Tupaia_belangeri
ENSDARG00000052747	gpatch3	62	69.159	ENSTTRG00000016677	GPATCH3	85	69.159	Tursiops_truncatus
ENSDARG00000052747	gpatch3	67	68.720	ENSUAMG00000026235	GPATCH3	96	66.527	Ursus_americanus
ENSDARG00000052747	gpatch3	67	69.194	ENSUMAG00000011894	GPATCH3	96	66.946	Ursus_maritimus
ENSDARG00000052747	gpatch3	67	69.668	ENSVVUG00000012041	GPATCH3	96	66.667	Vulpes_vulpes
ENSDARG00000052747	gpatch3	65	69.626	ENSXETG00000030345	GPATCH3	91	70.616	Xenopus_tropicalis
ENSDARG00000052747	gpatch3	74	67.286	ENSXCOG00000016129	gpatch3	96	67.286	Xiphophorus_couchianus
ENSDARG00000052747	gpatch3	77	66.545	ENSXMAG00000010749	gpatch3	97	66.545	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0032480	negative regulation of type I interferon production	-	IEA	Process
GO:0039536	negative regulation of RIG-I signaling pathway	-	IEA	Process
GO:0043010	camera-type eye development	28397860.	IMP	Process
GO:1904888	cranial skeletal system development	28397860.	IMP	Process