EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSDARG00000053340 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-138g9.3
Alias: -
Full Name: si:ch211-138g9.3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 5750 bases
Position: chr1:46238774-46244523
Accession: ZDB-GENE-090311-27
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000117818	RIO1	PF01163.22	0.00041	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000143908	-	1878	-	ENSDARP00000117818	573 (aa)	-	B7ZDE1

Gene Model

Click here to download ENSDARG00000053340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000053340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000053340	si:ch211-138g9.3	95	65.773	ENSDARG00000095927	si:ch211-57m13.1	100	70.084
ENSDARG00000053340	si:ch211-138g9.3	100	98.604	ENSDARG00000101352	si:dkey-34d22.3	99	98.604
ENSDARG00000053340	si:ch211-138g9.3	68	89.770	ENSDARG00000097997	si:ch211-272b8.7	100	89.770
ENSDARG00000053340	si:ch211-138g9.3	89	92.435	ENSDARG00000052677	si:ch211-138g9.2	99	90.590
ENSDARG00000053340	si:ch211-138g9.3	98	98.930	ENSDARG00000078558	si:dkey-22i16.10	100	98.930