EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000053452 (Gene tree)
Gene ID: 541421
Gene Symbol: pop5
Alias: fc69d03|wu:fc69d03|wu:fy24c05|zgc:110616
Full Name: POP5 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 5116 bases
Position: chr8:41274211-41279326
Accession: ZDB-GENE-050320-123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000069973	RNase_P_Rpp14	PF01900.19	8.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000075491	-	916	-	ENSDARP00000069973	169 (aa)	-	Q5BJI6

Gene Model

Click here to download ENSDARG00000053452's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03008	Ribosome biogenesis in eukaryotes	KEGG
dre03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000053452's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000053452	pop5	88	53.333	ENSG00000167272	POP5	91	52.980	Homo_sapiens
ENSDARG00000053452	pop5	88	56.376	ENSAPOG00000023686	POP5	89	56.000	Acanthochromis_polyacanthus
ENSDARG00000053452	pop5	98	48.485	ENSAMEG00000008503	POP5	88	51.656	Ailuropoda_melanoleuca
ENSDARG00000053452	pop5	88	64.430	ENSACIG00000018362	pop5	89	64.430	Amphilophus_citrinellus
ENSDARG00000053452	pop5	88	59.732	ENSAOCG00000001930	pop5	89	59.333	Amphiprion_ocellaris
ENSDARG00000053452	pop5	88	59.732	ENSAPEG00000006795	pop5	89	59.333	Amphiprion_percula
ENSDARG00000053452	pop5	88	60.403	ENSATEG00000016792	pop5	88	60.403	Anabas_testudineus
ENSDARG00000053452	pop5	56	56.383	ENSAPLG00000015761	POP5	87	56.383	Anas_platyrhynchos
ENSDARG00000053452	pop5	99	46.429	ENSACAG00000003091	POP5	89	48.993	Anolis_carolinensis
ENSDARG00000053452	pop5	85	55.172	ENSANAG00000023744	POP5	91	54.605	Aotus_nancymaae
ENSDARG00000053452	pop5	89	62.000	ENSACLG00000021131	-	88	62.000	Astatotilapia_calliptera
ENSDARG00000053452	pop5	91	66.013	ENSAMXG00000038175	pop5	89	65.161	Astyanax_mexicanus
ENSDARG00000053452	pop5	99	50.296	ENSBTAG00000005385	POP5	84	53.472	Bos_taurus
ENSDARG00000053452	pop5	85	53.472	ENSCJAG00000001309	POP5	91	52.980	Callithrix_jacchus
ENSDARG00000053452	pop5	98	47.590	ENSCAFG00000010389	POP5	88	50.331	Canis_familiaris
ENSDARG00000053452	pop5	98	47.590	ENSCAFG00020020663	POP5	88	50.331	Canis_lupus_dingo
ENSDARG00000053452	pop5	99	51.176	ENSCHIG00000016402	POP5	88	52.980	Capra_hircus
ENSDARG00000053452	pop5	85	52.778	ENSTSYG00000027616	POP5	91	51.923	Carlito_syrichta
ENSDARG00000053452	pop5	64	51.818	ENSCAPG00000016873	POP5	88	54.545	Cavia_aperea
ENSDARG00000053452	pop5	98	49.102	ENSCPOG00000012337	POP5	92	50.641	Cavia_porcellus
ENSDARG00000053452	pop5	88	53.333	ENSCCAG00000023154	POP5	91	52.980	Cebus_capucinus
ENSDARG00000053452	pop5	88	53.333	ENSCATG00000036825	POP5	91	52.980	Cercocebus_atys
ENSDARG00000053452	pop5	100	51.176	ENSCLAG00000007808	POP5	91	51.923	Chinchilla_lanigera
ENSDARG00000053452	pop5	88	53.333	ENSCSAG00000002246	POP5	91	52.980	Chlorocebus_sabaeus
ENSDARG00000053452	pop5	85	45.139	ENSCHOG00000013969	POP5	86	46.000	Choloepus_hoffmanni
ENSDARG00000053452	pop5	100	50.888	ENSCPBG00000011331	POP5	91	53.548	Chrysemys_picta_bellii
ENSDARG00000053452	pop5	88	53.333	ENSCANG00000028001	POP5	91	52.980	Colobus_angolensis_palliatus
ENSDARG00000053452	pop5	98	53.571	ENSCGRG00001017974	Pop5	84	55.862	Cricetulus_griseus_chok1gshd
ENSDARG00000053452	pop5	98	53.571	ENSCGRG00000010102	Pop5	84	55.862	Cricetulus_griseus_crigri
ENSDARG00000053452	pop5	93	58.228	ENSCSEG00000008332	-	90	59.355	Cynoglossus_semilaevis
ENSDARG00000053452	pop5	82	59.420	ENSCSEG00000011103	pop5	95	59.310	Cynoglossus_semilaevis
ENSDARG00000053452	pop5	88	40.940	ENSCVAG00000009152	-	87	40.940	Cyprinodon_variegatus
ENSDARG00000053452	pop5	85	53.472	ENSDNOG00000045952	-	86	53.020	Dasypus_novemcinctus
ENSDARG00000053452	pop5	85	52.778	ENSDNOG00000012668	-	78	52.349	Dasypus_novemcinctus
ENSDARG00000053452	pop5	85	53.472	ENSDORG00000029401	Pop5	92	52.564	Dipodomys_ordii
ENSDARG00000053452	pop5	89	31.333	FBgn0036696	CG14057	99	31.333	Drosophila_melanogaster
ENSDARG00000053452	pop5	99	49.405	ENSETEG00000009283	POP5	84	52.083	Echinops_telfairi
ENSDARG00000053452	pop5	98	37.349	ENSEBUG00000016369	pop5	88	40.411	Eptatretus_burgeri
ENSDARG00000053452	pop5	98	49.398	ENSEASG00005004714	POP5	91	51.923	Equus_asinus_asinus
ENSDARG00000053452	pop5	98	49.398	ENSECAG00000010012	POP5	91	51.923	Equus_caballus
ENSDARG00000053452	pop5	99	58.929	ENSELUG00000023394	pop5	91	63.758	Esox_lucius
ENSDARG00000053452	pop5	100	48.824	ENSFCAG00000042614	POP5	88	50.993	Felis_catus
ENSDARG00000053452	pop5	89	53.333	ENSFALG00000007537	POP5	89	53.333	Ficedula_albicollis
ENSDARG00000053452	pop5	98	50.898	ENSFDAG00000009972	POP5	92	51.282	Fukomys_damarensis
ENSDARG00000053452	pop5	98	56.548	ENSFHEG00000022341	pop5	89	60.000	Fundulus_heteroclitus
ENSDARG00000053452	pop5	79	58.647	ENSGMOG00000001073	pop5	99	58.647	Gadus_morhua
ENSDARG00000053452	pop5	85	50.694	ENSGALG00000007124	POP5	51	50.694	Gallus_gallus
ENSDARG00000053452	pop5	89	58.000	ENSGAFG00000005937	-	89	58.000	Gambusia_affinis
ENSDARG00000053452	pop5	98	55.152	ENSGACG00000012710	-	91	58.667	Gasterosteus_aculeatus
ENSDARG00000053452	pop5	100	50.888	ENSGAGG00000016005	POP5	91	53.548	Gopherus_agassizii
ENSDARG00000053452	pop5	88	53.333	ENSGGOG00000013505	POP5	91	52.980	Gorilla_gorilla
ENSDARG00000053452	pop5	89	62.667	ENSHBUG00000011718	-	88	62.667	Haplochromis_burtoni
ENSDARG00000053452	pop5	100	51.176	ENSHGLG00000011786	POP5	92	51.923	Heterocephalus_glaber_female
ENSDARG00000053452	pop5	100	51.176	ENSHGLG00100014284	POP5	92	51.923	Heterocephalus_glaber_male
ENSDARG00000053452	pop5	88	56.376	ENSHCOG00000011809	pop5	90	56.376	Hippocampus_comes
ENSDARG00000053452	pop5	89	66.000	ENSIPUG00000003437	pop5	89	66.000	Ictalurus_punctatus
ENSDARG00000053452	pop5	98	50.602	ENSSTOG00000012577	POP5	91	50.968	Ictidomys_tridecemlineatus
ENSDARG00000053452	pop5	85	53.793	ENSJJAG00000001080	Pop5	86	53.333	Jaculus_jaculus
ENSDARG00000053452	pop5	88	60.403	ENSKMAG00000011158	-	86	60.403	Kryptolebias_marmoratus
ENSDARG00000053452	pop5	93	55.063	ENSLBEG00000008652	pop5	81	57.333	Labrus_bergylta
ENSDARG00000053452	pop5	98	53.012	ENSLACG00000018188	POP5	94	55.556	Latimeria_chalumnae
ENSDARG00000053452	pop5	89	59.333	ENSLOCG00000002924	pop5	91	58.065	Lepisosteus_oculatus
ENSDARG00000053452	pop5	96	51.829	ENSLAFG00000014545	POP5	91	52.564	Loxodonta_africana
ENSDARG00000053452	pop5	88	53.333	ENSMFAG00000045933	POP5	95	52.980	Macaca_fascicularis
ENSDARG00000053452	pop5	88	53.333	ENSMMUG00000040120	POP5	91	52.980	Macaca_mulatta
ENSDARG00000053452	pop5	88	53.333	ENSMNEG00000041716	POP5	91	52.980	Macaca_nemestrina
ENSDARG00000053452	pop5	85	52.778	ENSMLEG00000029377	POP5	91	52.318	Mandrillus_leucophaeus
ENSDARG00000053452	pop5	89	58.667	ENSMAMG00000002108	pop5	89	58.667	Mastacembelus_armatus
ENSDARG00000053452	pop5	89	62.000	ENSMZEG00005000069	-	88	62.000	Maylandia_zebra
ENSDARG00000053452	pop5	98	52.976	ENSMAUG00000019670	Pop5	84	55.172	Mesocricetus_auratus
ENSDARG00000053452	pop5	98	50.000	ENSMICG00000008692	POP5	91	52.564	Microcebus_murinus
ENSDARG00000053452	pop5	98	50.299	ENSMOCG00000013322	Pop5	83	53.472	Microtus_ochrogaster
ENSDARG00000053452	pop5	86	60.690	ENSMMOG00000010471	pop5	87	60.690	Mola_mola
ENSDARG00000053452	pop5	98	52.121	ENSMODG00000003066	POP5	62	54.194	Monodelphis_domestica
ENSDARG00000053452	pop5	89	60.667	ENSMALG00000017797	-	89	60.667	Monopterus_albus
ENSDARG00000053452	pop5	98	52.976	MGP_CAROLIEiJ_G0027618	Pop5	88	54.605	Mus_caroli
ENSDARG00000053452	pop5	98	52.976	ENSMUSG00000060152	Pop5	88	54.605	Mus_musculus
ENSDARG00000053452	pop5	98	52.976	MGP_PahariEiJ_G0024198	Pop5	88	54.605	Mus_pahari
ENSDARG00000053452	pop5	98	52.976	MGP_SPRETEiJ_G0028616	Pop5	88	54.605	Mus_spretus
ENSDARG00000053452	pop5	88	52.667	ENSMPUG00000003221	POP5	88	52.318	Mustela_putorius_furo
ENSDARG00000053452	pop5	85	52.083	ENSMLUG00000014657	POP5	93	51.282	Myotis_lucifugus
ENSDARG00000053452	pop5	85	52.778	ENSNGAG00000002594	Pop5	83	52.778	Nannospalax_galili
ENSDARG00000053452	pop5	74	54.400	ENSNBRG00000001020	-	91	54.400	Neolamprologus_brichardi
ENSDARG00000053452	pop5	85	53.472	ENSNLEG00000015839	POP5	91	52.980	Nomascus_leucogenys
ENSDARG00000053452	pop5	98	50.000	ENSMEUG00000015288	POP5	91	55.333	Notamacropus_eugenii
ENSDARG00000053452	pop5	85	54.167	ENSOPRG00000004327	POP5	83	54.167	Ochotona_princeps
ENSDARG00000053452	pop5	85	53.472	ENSODEG00000006549	-	91	52.564	Octodon_degus
ENSDARG00000053452	pop5	99	46.429	ENSODEG00000010351	-	88	50.000	Octodon_degus
ENSDARG00000053452	pop5	89	63.333	ENSONIG00000011172	pop5	88	63.333	Oreochromis_niloticus
ENSDARG00000053452	pop5	56	63.158	ENSOANG00000001792	-	85	63.918	Ornithorhynchus_anatinus
ENSDARG00000053452	pop5	99	51.497	ENSOCUG00000006537	POP5	87	53.642	Oryctolagus_cuniculus
ENSDARG00000053452	pop5	99	54.762	ENSORLG00000014745	pop5	87	60.544	Oryzias_latipes
ENSDARG00000053452	pop5	99	55.621	ENSORLG00020001168	pop5	87	60.544	Oryzias_latipes_hni
ENSDARG00000053452	pop5	99	53.801	ENSORLG00015013535	pop5	87	58.389	Oryzias_latipes_hsok
ENSDARG00000053452	pop5	99	56.548	ENSOMEG00000017643	pop5	88	60.403	Oryzias_melastigma
ENSDARG00000053452	pop5	88	53.691	ENSOGAG00000008528	POP5	90	53.691	Otolemur_garnettii
ENSDARG00000053452	pop5	99	50.588	ENSOARG00000012764	POP5	88	52.318	Ovis_aries
ENSDARG00000053452	pop5	88	53.333	ENSPPAG00000043719	POP5	91	52.980	Pan_paniscus
ENSDARG00000053452	pop5	100	48.824	ENSPPRG00000006474	POP5	88	50.993	Panthera_pardus
ENSDARG00000053452	pop5	100	48.824	ENSPTIG00000012194	POP5	88	50.993	Panthera_tigris_altaica
ENSDARG00000053452	pop5	88	53.333	ENSPTRG00000005543	POP5	91	52.980	Pan_troglodytes
ENSDARG00000053452	pop5	88	53.333	ENSPANG00000014166	POP5	91	52.980	Papio_anubis
ENSDARG00000053452	pop5	89	62.667	ENSPKIG00000025154	pop5	92	61.290	Paramormyrops_kingsleyae
ENSDARG00000053452	pop5	66	56.250	ENSPSIG00000013154	POP5	78	60.825	Pelodiscus_sinensis
ENSDARG00000053452	pop5	99	50.898	ENSPMGG00000000812	-	93	53.548	Periophthalmus_magnuspinnatus
ENSDARG00000053452	pop5	98	52.381	ENSPEMG00000017493	Pop5	91	52.866	Peromyscus_maniculatus_bairdii
ENSDARG00000053452	pop5	89	56.291	ENSPFOG00000013000	pop5	96	51.887	Poecilia_formosa
ENSDARG00000053452	pop5	89	56.667	ENSPLAG00000014070	pop5	89	56.667	Poecilia_latipinna
ENSDARG00000053452	pop5	89	56.667	ENSPMEG00000024039	pop5	89	56.667	Poecilia_mexicana
ENSDARG00000053452	pop5	89	56.667	ENSPMEG00000012863	POP5	89	56.667	Poecilia_mexicana
ENSDARG00000053452	pop5	89	58.667	ENSPREG00000020151	pop5	89	58.667	Poecilia_reticulata
ENSDARG00000053452	pop5	88	53.333	ENSPPYG00000005036	POP5	77	52.980	Pongo_abelii
ENSDARG00000053452	pop5	63	55.660	ENSPCAG00000004788	POP5	100	55.660	Procavia_capensis
ENSDARG00000053452	pop5	98	50.000	ENSPCOG00000017618	POP5	91	52.564	Propithecus_coquereli
ENSDARG00000053452	pop5	98	47.590	ENSPVAG00000002233	POP5	91	50.641	Pteropus_vampyrus
ENSDARG00000053452	pop5	89	63.333	ENSPNYG00000002679	pop5	88	63.333	Pundamilia_nyererei
ENSDARG00000053452	pop5	92	59.615	ENSPNAG00000012662	pop5	86	60.390	Pygocentrus_nattereri
ENSDARG00000053452	pop5	95	50.932	ENSRNOG00000001199	Pop5	88	52.318	Rattus_norvegicus
ENSDARG00000053452	pop5	85	52.778	ENSRBIG00000043505	POP5	90	52.778	Rhinopithecus_bieti
ENSDARG00000053452	pop5	85	52.778	ENSRROG00000045063	POP5	91	52.318	Rhinopithecus_roxellana
ENSDARG00000053452	pop5	82	56.522	ENSSBOG00000032691	POP5	99	56.522	Saimiri_boliviensis_boliviensis
ENSDARG00000053452	pop5	91	63.636	ENSSFOG00015005630	pop5	91	63.226	Scleropages_formosus
ENSDARG00000053452	pop5	88	61.589	ENSSMAG00000018868	pop5	88	61.589	Scophthalmus_maximus
ENSDARG00000053452	pop5	99	59.524	ENSSDUG00000001282	-	92	61.290	Seriola_dumerili
ENSDARG00000053452	pop5	99	61.310	ENSSLDG00000003801	-	92	62.581	Seriola_lalandi_dorsalis
ENSDARG00000053452	pop5	99	61.310	ENSSLDG00000017031	pop5	92	62.581	Seriola_lalandi_dorsalis
ENSDARG00000053452	pop5	63	54.717	ENSSARG00000005564	POP5	64	54.717	Sorex_araneus
ENSDARG00000053452	pop5	88	55.705	ENSSPUG00000015531	POP5	88	55.705	Sphenodon_punctatus
ENSDARG00000053452	pop5	88	63.758	ENSSPAG00000015306	pop5	88	63.758	Stegastes_partitus
ENSDARG00000053452	pop5	99	51.765	ENSSSCG00000009912	POP5	88	53.642	Sus_scrofa
ENSDARG00000053452	pop5	98	51.205	ENSTGUG00000009602	POP5	90	53.333	Taeniopygia_guttata
ENSDARG00000053452	pop5	99	59.281	ENSTRUG00000016214	pop5	89	63.333	Takifugu_rubripes
ENSDARG00000053452	pop5	100	53.846	ENSTNIG00000011465	pop5	85	60.417	Tetraodon_nigroviridis
ENSDARG00000053452	pop5	85	53.472	ENSTBEG00000010131	POP5	88	52.980	Tupaia_belangeri
ENSDARG00000053452	pop5	98	51.786	ENSTTRG00000000153	POP5	88	52.980	Tursiops_truncatus
ENSDARG00000053452	pop5	94	47.170	ENSUAMG00000015541	POP5	66	50.345	Ursus_americanus
ENSDARG00000053452	pop5	98	48.485	ENSUMAG00000006137	POP5	88	51.656	Ursus_maritimus
ENSDARG00000053452	pop5	99	52.353	ENSVPAG00000010365	POP5	88	54.305	Vicugna_pacos
ENSDARG00000053452	pop5	98	47.590	ENSVVUG00000021154	POP5	88	50.331	Vulpes_vulpes
ENSDARG00000053452	pop5	67	53.509	ENSXETG00000031793	POP5	85	59.794	Xenopus_tropicalis
ENSDARG00000053452	pop5	89	58.000	ENSXMAG00000003508	-	77	58.000	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000172	ribonuclease MRP complex	21873635.	IBA	Component
GO:0004526	ribonuclease P activity	21873635.	IBA	Function
GO:0004526	ribonuclease P activity	-	IEA	Function
GO:0004540	ribonuclease activity	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005655	nucleolar ribonuclease P complex	21873635.	IBA	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0008033	tRNA processing	21873635.	IBA	Process
GO:0008033	tRNA processing	-	IEA	Process
GO:0016070	RNA metabolic process	-	IEA	Process
GO:0016787	hydrolase activity	-	IEA	Function