EuRBPDB

Description
Ensembl ID
ENSDARG00000053474 (Gene tree)
Gene ID
541541
Gene Symbol
tdrkh
Alias
TDRD2|zgc:113056
Full Name
tudor and KH domain containing
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Minus strand
Length
20965 bases
Position
chr12:33561418-33582382
Accession
ZDB-GENE-050327-81
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSDARP00000113528KH_1PF00013.292.8e-2011
ENSDARP00000005097KH_1PF00013.295.5e-1911
ENSDARP00000144762KH_1PF00013.295.5e-1911
ENSDARP00000005097TUDORPF00567.243.5e-2511
ENSDARP00000144762TUDORPF00567.243.5e-2511
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSDART00000009794-2382XM_017358454ENSDARP00000005097573 (aa)XP_017213943F1R0M9
ENSDART00000184661-1753-ENSDARP00000144762573 (aa)-F1R0M9
ENSDART00000142329-1845-ENSDARP00000118670445 (aa)-F1QM67
ENSDART00000136617-790-ENSDARP00000113528211 (aa)-E9QJ41
Gene Model
Protein-Protein Interaction (PPI)
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSDARG00000053474tdrkh9962.207ENSAPOG00000012653tdrkh9964.043Acanthochromis_polyacanthus
ENSDARG00000053474tdrkh10054.245ENSACIG00000010318tdrkh9858.879Amphilophus_citrinellus
ENSDARG00000053474tdrkh9762.254ENSAOCG00000020623tdrkh9962.254Amphiprion_ocellaris
ENSDARG00000053474tdrkh10056.019ENSAPEG00000018388tdrkh9961.634Amphiprion_percula
ENSDARG00000053474tdrkh9962.051ENSATEG00000023809tdrkh9962.206Anabas_testudineus
ENSDARG00000053474tdrkh9459.099ENSACLG00000003017tdrkh9959.099Astatotilapia_calliptera
ENSDARG00000053474tdrkh9973.657ENSAMXG00000011664tdrkh9973.657Astyanax_mexicanus
ENSDARG00000053474tdrkh10053.953ENSCSEG00000002894tdrkh9958.230Cynoglossus_semilaevis
ENSDARG00000053474tdrkh5870.732ENSCVAG00000020347tdrkh7770.732Cyprinodon_variegatus
ENSDARG00000053474tdrkh9963.529ENSELUG00000024537tdrkh9963.529Esox_lucius
ENSDARG00000053474tdrkh10053.488ENSFHEG00000003544tdrkh9959.206Fundulus_heteroclitus
ENSDARG00000053474tdrkh9960.449ENSGMOG00000009304tdrkh9960.449Gadus_morhua
ENSDARG00000053474tdrkh9457.782ENSGAFG00000010754tdrkh9957.782Gambusia_affinis
ENSDARG00000053474tdrkh9961.034ENSGACG00000015258tdrkh9961.034Gasterosteus_aculeatus
ENSDARG00000053474tdrkh9459.099ENSHBUG00000017609tdrkh9959.099Haplochromis_burtoni
ENSDARG00000053474tdrkh10072.038ENSIPUG00000009673tdrkh10075.228Ictalurus_punctatus
ENSDARG00000053474tdrkh9459.640ENSKMAG00000016638tdrkh9359.364Kryptolebias_marmoratus
ENSDARG00000053474tdrkh9659.107ENSLBEG00000027323tdrkh9959.107Labrus_bergylta
ENSDARG00000053474tdrkh9955.000ENSLOCG00000011381tdrkh9955.978Lepisosteus_oculatus
ENSDARG00000053474tdrkh10056.944ENSMAMG00000020343tdrkh9962.075Mastacembelus_armatus
ENSDARG00000053474tdrkh9459.099ENSMZEG00005006755tdrkh9959.099Maylandia_zebra
ENSDARG00000053474tdrkh9762.791ENSMMOG00000020663tdrkh9562.791Mola_mola
ENSDARG00000053474tdrkh10055.140ENSMALG00000015401tdrkh9959.532Monopterus_albus
ENSDARG00000053474tdrkh10053.271ENSNBRG00000023815tdrkh9957.220Neolamprologus_brichardi
ENSDARG00000053474tdrkh9459.239ENSORLG00000029204tdrkh9959.239Oryzias_latipes
ENSDARG00000053474tdrkh10050.935ENSORLG00020016168tdrkh9758.414Oryzias_latipes_hni
ENSDARG00000053474tdrkh10052.804ENSORLG00015014094tdrkh9660.075Oryzias_latipes_hsok
ENSDARG00000053474tdrkh9459.889ENSOMEG00000015063tdrkh9259.889Oryzias_melastigma
ENSDARG00000053474tdrkh10058.768ENSPKIG00000017597tdrkh9962.950Paramormyrops_kingsleyae
ENSDARG00000053474tdrkh10053.738ENSPMGG00000019362tdrkh9956.881Periophthalmus_magnuspinnatus
ENSDARG00000053474tdrkh9958.603ENSPFOG00000013032tdrkh9958.603Poecilia_formosa
ENSDARG00000053474tdrkh9458.919ENSPLAG00000004193tdrkh9958.919Poecilia_latipinna
ENSDARG00000053474tdrkh9459.099ENSPMEG00000016502tdrkh9959.099Poecilia_mexicana
ENSDARG00000053474tdrkh9957.045ENSPREG00000004213tdrkh9957.045Poecilia_reticulata
ENSDARG00000053474tdrkh10053.023ENSPNYG00000022818tdrkh9759.108Pundamilia_nyererei
ENSDARG00000053474tdrkh10076.303ENSPNAG00000008783tdrkh10076.207Pygocentrus_nattereri
ENSDARG00000053474tdrkh9460.650ENSSFOG00015001048tdrkh9961.191Scleropages_formosus
ENSDARG00000053474tdrkh9762.410ENSSMAG00000001532tdrkh9961.717Scophthalmus_maximus
ENSDARG00000053474tdrkh10057.746ENSSDUG00000013393tdrkh9961.702Seriola_dumerili
ENSDARG00000053474tdrkh9960.956ENSSLDG00000017418tdrkh9961.922Seriola_lalandi_dorsalis
ENSDARG00000053474tdrkh9961.398ENSSPAG00000006435tdrkh9961.730Stegastes_partitus
ENSDARG00000053474tdrkh10053.023ENSTRUG00000006644tdrkh9756.364Takifugu_rubripes
ENSDARG00000053474tdrkh10052.804ENSTNIG00000003157tdrkh10057.719Tetraodon_nigroviridis
ENSDARG00000053474tdrkh7876.471ENSXCOG00000016972tdrkh9976.471Xiphophorus_couchianus
ENSDARG00000053474tdrkh10051.402ENSXMAG00000014756tdrkh9956.624Xiphophorus_maculatus
Gene Ontology
Go ID
Go_term
PubmedID
Evidence
Category
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0008150biological_process-NDProcess
GO:0016020membrane-IEAComponent
GO:0016021integral component of membrane-IEAComponent