EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000053695 (Gene tree)
Gene ID: 797781
Gene Symbol: zgc:162948
Alias: -
Full Name: zgc:162948
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 6877 bases
Position: chr4:77253851-77260727
Accession: ZDB-GENE-070424-46
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000070251	zf-C2H2	PF00096.26	1.6e-37	1	6
ENSDARP00000070251	zf-C2H2	PF00096.26	1.6e-37	2	6
ENSDARP00000070251	zf-C2H2	PF00096.26	1.6e-37	3	6
ENSDARP00000070251	zf-C2H2	PF00096.26	1.6e-37	4	6
ENSDARP00000070251	zf-C2H2	PF00096.26	1.6e-37	5	6
ENSDARP00000070251	zf-C2H2	PF00096.26	1.6e-37	6	6
ENSDARP00000070251	zf-met	PF12874.7	3e-17	1	3
ENSDARP00000070251	zf-met	PF12874.7	3e-17	2	3
ENSDARP00000070251	zf-met	PF12874.7	3e-17	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000075770	-	1493	-	ENSDARP00000070251	288 (aa)	-	F1QP14

Gene Model

Click here to download ENSDARG00000053695's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000053695's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000053695	zgc:162948	97	47.857	ENSDARG00000105784	LO018029.1	96	49.438
ENSDARG00000053695	zgc:162948	91	75.217	ENSDARG00000113837	LO018029.2	87	74.892
ENSDARG00000053695	zgc:162948	98	49.565	ENSDARG00000097215	si:dkey-172k15.3	99	49.565

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000053695	zgc:162948	76	53.933	ENSGMOG00000020024	-	100	53.933	Gadus_morhua
ENSDARG00000053695	zgc:162948	87	33.607	ENSSPAG00000017203	-	55	35.256	Stegastes_partitus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0008150	biological_process	-	ND	Process
GO:0046872	metal ion binding	-	IEA	Function