EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000054164 (Gene tree)
Gene ID: 553580
Gene Symbol: mrps17
Alias: zgc:110031
Full Name: mitochondrial ribosomal protein S17
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 7292 bases
Position: chr21:37411547-37418838
Accession: ZDB-GENE-050522-390
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000070795	Ribosomal_S17	PF00366.20	1.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000076320	-	651	-	ENSDARP00000070795	136 (aa)	-	Q503X4

Gene Model

Click here to download ENSDARG00000054164's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000054164's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000054164	mrps17	97	74.436	ENSG00000239789	MRPS17	100	74.436	Homo_sapiens
ENSDARG00000054164	mrps17	98	74.436	ENSAPOG00000000295	mrps17	82	74.436	Acanthochromis_polyacanthus
ENSDARG00000054164	mrps17	97	67.424	ENSAMEG00000016161	-	94	67.424	Ailuropoda_melanoleuca
ENSDARG00000054164	mrps17	94	77.344	ENSACIG00000019454	mrps17	93	77.344	Amphilophus_citrinellus
ENSDARG00000054164	mrps17	98	72.932	ENSAOCG00000015138	mrps17	91	72.932	Amphiprion_ocellaris
ENSDARG00000054164	mrps17	98	73.684	ENSAPEG00000017481	mrps17	91	73.684	Amphiprion_percula
ENSDARG00000054164	mrps17	95	76.744	ENSATEG00000007899	mrps17	93	75.000	Anabas_testudineus
ENSDARG00000054164	mrps17	97	68.889	ENSAPLG00000010523	-	99	68.889	Anas_platyrhynchos
ENSDARG00000054164	mrps17	97	55.639	ENSANAG00000023853	-	99	55.639	Aotus_nancymaae
ENSDARG00000054164	mrps17	97	61.364	ENSANAG00000025061	-	99	61.364	Aotus_nancymaae
ENSDARG00000054164	mrps17	68	70.968	ENSANAG00000030302	-	79	70.968	Aotus_nancymaae
ENSDARG00000054164	mrps17	97	78.030	ENSACLG00000007174	mrps17	90	78.030	Astatotilapia_calliptera
ENSDARG00000054164	mrps17	95	80.620	ENSAMXG00000030410	mrps17	94	81.061	Astyanax_mexicanus
ENSDARG00000054164	mrps17	97	72.932	ENSBTAG00000007934	MRPS17	99	72.932	Bos_taurus
ENSDARG00000054164	mrps17	97	72.180	ENSBTAG00000023186	-	99	72.180	Bos_taurus
ENSDARG00000054164	mrps17	97	74.436	ENSCJAG00000021291	-	99	74.436	Callithrix_jacchus
ENSDARG00000054164	mrps17	92	68.254	ENSCJAG00000022879	-	94	68.254	Callithrix_jacchus
ENSDARG00000054164	mrps17	97	72.932	ENSCJAG00000022938	-	99	72.932	Callithrix_jacchus
ENSDARG00000054164	mrps17	97	71.429	ENSCAFG00000010098	-	91	71.429	Canis_familiaris
ENSDARG00000054164	mrps17	97	71.429	ENSCAFG00020004866	-	99	71.429	Canis_lupus_dingo
ENSDARG00000054164	mrps17	97	72.932	ENSCHIG00000014572	-	99	72.932	Capra_hircus
ENSDARG00000054164	mrps17	97	72.932	ENSTSYG00000001260	-	99	72.932	Carlito_syrichta
ENSDARG00000054164	mrps17	85	75.000	ENSCAPG00000006241	-	99	75.000	Cavia_aperea
ENSDARG00000054164	mrps17	92	61.600	ENSCCAG00000037194	-	93	61.600	Cebus_capucinus
ENSDARG00000054164	mrps17	97	73.684	ENSCCAG00000025426	-	99	73.684	Cebus_capucinus
ENSDARG00000054164	mrps17	96	63.846	ENSCATG00000030575	-	98	63.846	Cercocebus_atys
ENSDARG00000054164	mrps17	82	73.451	ENSCATG00000039682	-	99	73.451	Cercocebus_atys
ENSDARG00000054164	mrps17	97	72.180	ENSCLAG00000007650	-	99	73.333	Chinchilla_lanigera
ENSDARG00000054164	mrps17	97	66.165	ENSCSAG00000019470	-	99	66.165	Chlorocebus_sabaeus
ENSDARG00000054164	mrps17	97	75.940	ENSCSAG00000016120	-	99	75.940	Chlorocebus_sabaeus
ENSDARG00000054164	mrps17	79	79.439	ENSCHOG00000010576	-	82	79.439	Choloepus_hoffmanni
ENSDARG00000054164	mrps17	97	69.630	ENSCPBG00000014888	-	99	69.630	Chrysemys_picta_bellii
ENSDARG00000054164	mrps17	97	59.398	ENSCANG00000035780	-	93	59.398	Colobus_angolensis_palliatus
ENSDARG00000054164	mrps17	97	74.436	ENSCANG00000030538	-	99	74.436	Colobus_angolensis_palliatus
ENSDARG00000054164	mrps17	97	64.394	ENSCANG00000035889	-	99	64.394	Colobus_angolensis_palliatus
ENSDARG00000054164	mrps17	97	69.173	ENSCGRG00001012873	Mrps17	100	69.173	Cricetulus_griseus_chok1gshd
ENSDARG00000054164	mrps17	98	75.735	ENSCSEG00000018563	mrps17	92	75.735	Cynoglossus_semilaevis
ENSDARG00000054164	mrps17	98	76.692	ENSCVAG00000006034	mrps17	91	76.692	Cyprinodon_variegatus
ENSDARG00000054164	mrps17	97	70.677	ENSDNOG00000014785	-	91	70.677	Dasypus_novemcinctus
ENSDARG00000054164	mrps17	80	33.028	FBgn0034986	mRpS17	70	33.028	Drosophila_melanogaster
ENSDARG00000054164	mrps17	78	58.491	ENSEBUG00000010858	mrps17	63	58.491	Eptatretus_burgeri
ENSDARG00000054164	mrps17	79	80.374	ENSEASG00005008885	-	88	80.374	Equus_asinus_asinus
ENSDARG00000054164	mrps17	76	68.932	ENSECAG00000028191	-	84	68.932	Equus_caballus
ENSDARG00000054164	mrps17	79	80.374	ENSECAG00000012583	-	88	80.374	Equus_caballus
ENSDARG00000054164	mrps17	97	77.941	ENSELUG00000006708	mrps17	89	77.941	Esox_lucius
ENSDARG00000054164	mrps17	96	74.809	ENSFCAG00000041039	-	98	74.809	Felis_catus
ENSDARG00000054164	mrps17	96	68.421	ENSFALG00000006796	-	90	68.421	Ficedula_albicollis
ENSDARG00000054164	mrps17	97	71.429	ENSFDAG00000001915	-	99	71.429	Fukomys_damarensis
ENSDARG00000054164	mrps17	98	75.940	ENSFHEG00000023082	mrps17	91	75.940	Fundulus_heteroclitus
ENSDARG00000054164	mrps17	98	70.370	ENSGMOG00000007056	mrps17	99	70.370	Gadus_morhua
ENSDARG00000054164	mrps17	97	67.407	ENSGALG00000002379	MRPS17	99	67.407	Gallus_gallus
ENSDARG00000054164	mrps17	96	74.809	ENSGAFG00000001727	mrps17	90	74.809	Gambusia_affinis
ENSDARG00000054164	mrps17	98	75.182	ENSGACG00000020492	mrps17	96	75.182	Gasterosteus_aculeatus
ENSDARG00000054164	mrps17	97	69.630	ENSGAGG00000022429	-	99	69.630	Gopherus_agassizii
ENSDARG00000054164	mrps17	97	62.879	ENSGGOG00000044141	-	99	62.879	Gorilla_gorilla
ENSDARG00000054164	mrps17	97	75.188	ENSGGOG00000039358	-	99	75.188	Gorilla_gorilla
ENSDARG00000054164	mrps17	97	78.030	ENSHBUG00000006127	mrps17	90	78.030	Haplochromis_burtoni
ENSDARG00000054164	mrps17	89	58.537	ENSHGLG00000010593	-	96	58.537	Heterocephalus_glaber_female
ENSDARG00000054164	mrps17	89	58.537	ENSHGLG00100012532	-	96	58.537	Heterocephalus_glaber_male
ENSDARG00000054164	mrps17	97	73.684	ENSHGLG00100010825	-	99	73.684	Heterocephalus_glaber_male
ENSDARG00000054164	mrps17	93	72.441	ENSHCOG00000009491	mrps17	91	72.441	Hippocampus_comes
ENSDARG00000054164	mrps17	100	81.159	ENSIPUG00000007844	MRPS17	99	81.159	Ictalurus_punctatus
ENSDARG00000054164	mrps17	87	60.504	ENSJJAG00000022596	-	92	60.504	Jaculus_jaculus
ENSDARG00000054164	mrps17	100	73.913	ENSKMAG00000006452	mrps17	95	73.913	Kryptolebias_marmoratus
ENSDARG00000054164	mrps17	96	74.815	ENSLBEG00000000120	mrps17	91	74.815	Labrus_bergylta
ENSDARG00000054164	mrps17	96	74.809	ENSLACG00000018908	mrps17	92	74.809	Latimeria_chalumnae
ENSDARG00000054164	mrps17	98	75.940	ENSLOCG00000004118	mrps17	93	75.940	Lepisosteus_oculatus
ENSDARG00000054164	mrps17	88	72.500	ENSLAFG00000027907	-	98	72.500	Loxodonta_africana
ENSDARG00000054164	mrps17	97	75.188	ENSMFAG00000038594	-	99	75.188	Macaca_fascicularis
ENSDARG00000054164	mrps17	97	69.925	ENSMMUG00000000585	-	75	69.925	Macaca_mulatta
ENSDARG00000054164	mrps17	97	66.165	ENSMMUG00000041709	-	93	66.165	Macaca_mulatta
ENSDARG00000054164	mrps17	97	75.188	ENSMNEG00000035442	-	99	75.188	Macaca_nemestrina
ENSDARG00000054164	mrps17	97	74.436	ENSMLEG00000040782	-	99	74.436	Mandrillus_leucophaeus
ENSDARG00000054164	mrps17	92	69.841	ENSMLEG00000011393	-	91	69.841	Mandrillus_leucophaeus
ENSDARG00000054164	mrps17	98	75.556	ENSMAMG00000020981	mrps17	91	75.556	Mastacembelus_armatus
ENSDARG00000054164	mrps17	97	78.030	ENSMZEG00005024876	mrps17	90	78.030	Maylandia_zebra
ENSDARG00000054164	mrps17	97	67.407	ENSMGAG00000004317	-	99	67.407	Meleagris_gallopavo
ENSDARG00000054164	mrps17	97	69.925	ENSMAUG00000021017	Mrps17	100	69.925	Mesocricetus_auratus
ENSDARG00000054164	mrps17	97	73.684	ENSMICG00000046806	-	99	73.684	Microcebus_murinus
ENSDARG00000054164	mrps17	85	63.793	ENSMOCG00000017721	-	88	63.793	Microtus_ochrogaster
ENSDARG00000054164	mrps17	97	66.165	ENSMOCG00000008471	-	100	66.165	Microtus_ochrogaster
ENSDARG00000054164	mrps17	99	76.087	ENSMMOG00000012804	mrps17	96	76.087	Mola_mola
ENSDARG00000054164	mrps17	89	66.667	ENSMODG00000006523	-	100	66.667	Monodelphis_domestica
ENSDARG00000054164	mrps17	98	78.947	ENSMALG00000018057	mrps17	92	78.947	Monopterus_albus
ENSDARG00000054164	mrps17	88	71.667	MGP_CAROLIEiJ_G0027784	Mrps17	100	77.333	Mus_caroli
ENSDARG00000054164	mrps17	88	71.667	ENSMUSG00000034211	Mrps17	100	77.333	Mus_musculus
ENSDARG00000054164	mrps17	88	71.667	MGP_PahariEiJ_G0024399	Mrps17	100	77.333	Mus_pahari
ENSDARG00000054164	mrps17	88	71.667	MGP_SPRETEiJ_G0028783	Mrps17	100	77.333	Mus_spretus
ENSDARG00000054164	mrps17	97	69.925	ENSMPUG00000016230	-	69	68.939	Mustela_putorius_furo
ENSDARG00000054164	mrps17	88	70.866	ENSMLUG00000016710	-	98	70.866	Myotis_lucifugus
ENSDARG00000054164	mrps17	97	70.677	ENSNGAG00000020609	Mrps17	99	70.677	Nannospalax_galili
ENSDARG00000054164	mrps17	97	77.273	ENSNBRG00000002238	mrps17	90	77.273	Neolamprologus_brichardi
ENSDARG00000054164	mrps17	97	75.188	ENSNLEG00000032290	-	99	75.188	Nomascus_leucogenys
ENSDARG00000054164	mrps17	82	74.107	ENSMEUG00000005143	-	87	74.107	Notamacropus_eugenii
ENSDARG00000054164	mrps17	96	71.970	ENSOPRG00000009945	-	100	71.970	Ochotona_princeps
ENSDARG00000054164	mrps17	97	71.429	ENSODEG00000018639	-	99	71.429	Octodon_degus
ENSDARG00000054164	mrps17	97	70.677	ENSODEG00000017232	-	99	70.677	Octodon_degus
ENSDARG00000054164	mrps17	79	67.890	ENSODEG00000014911	-	96	67.890	Octodon_degus
ENSDARG00000054164	mrps17	97	58.647	ENSODEG00000004346	-	99	58.647	Octodon_degus
ENSDARG00000054164	mrps17	76	74.038	ENSODEG00000015145	-	100	74.038	Octodon_degus
ENSDARG00000054164	mrps17	96	59.542	ENSODEG00000006408	-	98	59.542	Octodon_degus
ENSDARG00000054164	mrps17	97	77.273	ENSONIG00000008746	mrps17	90	77.273	Oreochromis_niloticus
ENSDARG00000054164	mrps17	97	73.684	ENSOCUG00000024077	-	99	73.684	Oryctolagus_cuniculus
ENSDARG00000054164	mrps17	97	73.684	ENSOCUG00000027419	-	99	73.684	Oryctolagus_cuniculus
ENSDARG00000054164	mrps17	97	73.684	ENSOCUG00000001767	-	94	73.684	Oryctolagus_cuniculus
ENSDARG00000054164	mrps17	98	75.188	ENSORLG00000002795	mrps17	91	75.188	Oryzias_latipes
ENSDARG00000054164	mrps17	98	75.188	ENSORLG00020016792	mrps17	91	75.188	Oryzias_latipes_hni
ENSDARG00000054164	mrps17	98	75.188	ENSORLG00015001149	mrps17	91	75.188	Oryzias_latipes_hsok
ENSDARG00000054164	mrps17	95	75.969	ENSOMEG00000009095	mrps17	95	74.265	Oryzias_melastigma
ENSDARG00000054164	mrps17	97	65.152	ENSOGAG00000009088	-	99	65.152	Otolemur_garnettii
ENSDARG00000054164	mrps17	97	71.970	ENSOGAG00000010486	-	99	71.970	Otolemur_garnettii
ENSDARG00000054164	mrps17	97	72.180	ENSOARG00000009925	-	88	72.180	Ovis_aries
ENSDARG00000054164	mrps17	97	75.188	ENSPPAG00000036712	-	99	75.188	Pan_paniscus
ENSDARG00000054164	mrps17	97	62.879	ENSPPAG00000038238	-	99	62.879	Pan_paniscus
ENSDARG00000054164	mrps17	96	74.809	ENSPPRG00000000525	-	98	74.809	Panthera_pardus
ENSDARG00000054164	mrps17	96	74.809	ENSPTIG00000019404	-	80	74.809	Panthera_tigris_altaica
ENSDARG00000054164	mrps17	97	70.677	ENSPTRG00000051838	-	99	70.677	Pan_troglodytes
ENSDARG00000054164	mrps17	97	75.188	ENSPTRG00000043904	-	99	75.188	Pan_troglodytes
ENSDARG00000054164	mrps17	97	75.188	ENSPTRG00000019203	MRPS17	99	75.188	Pan_troglodytes
ENSDARG00000054164	mrps17	97	63.636	ENSPTRG00000048604	-	99	63.636	Pan_troglodytes
ENSDARG00000054164	mrps17	97	71.429	ENSPTRG00000046133	-	93	71.429	Pan_troglodytes
ENSDARG00000054164	mrps17	85	60.345	ENSPANG00000030519	-	97	60.345	Papio_anubis
ENSDARG00000054164	mrps17	97	75.188	ENSPANG00000015285	-	99	75.188	Papio_anubis
ENSDARG00000054164	mrps17	95	69.767	ENSPKIG00000018389	mrps17	94	69.767	Paramormyrops_kingsleyae
ENSDARG00000054164	mrps17	97	69.630	ENSPSIG00000013261	-	99	69.630	Pelodiscus_sinensis
ENSDARG00000054164	mrps17	89	66.129	ENSPMAG00000006299	mrps17	80	66.129	Petromyzon_marinus
ENSDARG00000054164	mrps17	95	72.093	ENSPFOG00000010719	mrps17	91	71.429	Poecilia_formosa
ENSDARG00000054164	mrps17	95	72.093	ENSPLAG00000018054	mrps17	91	71.429	Poecilia_latipinna
ENSDARG00000054164	mrps17	95	72.093	ENSPMEG00000014029	mrps17	91	71.429	Poecilia_mexicana
ENSDARG00000054164	mrps17	98	70.677	ENSPREG00000009010	mrps17	93	70.677	Poecilia_reticulata
ENSDARG00000054164	mrps17	97	75.188	ENSPPYG00000017547	-	99	75.188	Pongo_abelii
ENSDARG00000054164	mrps17	97	72.932	ENSPCOG00000013668	-	99	72.932	Propithecus_coquereli
ENSDARG00000054164	mrps17	67	72.527	ENSPCOG00000000608	-	82	72.527	Propithecus_coquereli
ENSDARG00000054164	mrps17	96	73.282	ENSPVAG00000006305	-	98	73.282	Pteropus_vampyrus
ENSDARG00000054164	mrps17	97	77.273	ENSPNYG00000018693	mrps17	90	77.273	Pundamilia_nyererei
ENSDARG00000054164	mrps17	95	84.496	ENSPNAG00000015336	mrps17	80	84.848	Pygocentrus_nattereri
ENSDARG00000054164	mrps17	94	63.846	ENSRNOG00000030847	AABR07012868.1	90	63.846	Rattus_norvegicus
ENSDARG00000054164	mrps17	85	74.359	ENSRNOG00000000926	Mrps17	91	74.359	Rattus_norvegicus
ENSDARG00000054164	mrps17	96	75.758	ENSRBIG00000032287	-	99	75.758	Rhinopithecus_bieti
ENSDARG00000054164	mrps17	90	75.610	ENSRBIG00000032061	-	99	76.667	Rhinopithecus_bieti
ENSDARG00000054164	mrps17	97	75.188	ENSRROG00000000039	-	99	75.188	Rhinopithecus_roxellana
ENSDARG00000054164	mrps17	96	75.758	ENSRROG00000021955	-	99	75.758	Rhinopithecus_roxellana
ENSDARG00000054164	mrps17	97	51.515	ENSSBOG00000030322	-	99	51.515	Saimiri_boliviensis_boliviensis
ENSDARG00000054164	mrps17	97	74.436	ENSSBOG00000025889	-	99	74.436	Saimiri_boliviensis_boliviensis
ENSDARG00000054164	mrps17	94	65.625	ENSSBOG00000003355	-	96	65.625	Saimiri_boliviensis_boliviensis
ENSDARG00000054164	mrps17	93	68.504	ENSSHAG00000009749	-	96	68.504	Sarcophilus_harrisii
ENSDARG00000054164	mrps17	100	70.588	ENSSFOG00015006180	mrps17	95	70.588	Scleropages_formosus
ENSDARG00000054164	mrps17	99	77.206	ENSSMAG00000001680	mrps17	91	77.206	Scophthalmus_maximus
ENSDARG00000054164	mrps17	98	77.778	ENSSDUG00000017736	mrps17	91	77.778	Seriola_dumerili
ENSDARG00000054164	mrps17	98	77.778	ENSSLDG00000015517	mrps17	91	77.778	Seriola_lalandi_dorsalis
ENSDARG00000054164	mrps17	97	70.370	ENSSPUG00000002623	-	99	70.370	Sphenodon_punctatus
ENSDARG00000054164	mrps17	98	72.180	ENSSPAG00000008641	mrps17	91	72.180	Stegastes_partitus
ENSDARG00000054164	mrps17	92	69.048	ENSSSCG00000034769	-	80	79.000	Sus_scrofa
ENSDARG00000054164	mrps17	97	71.429	ENSSSCG00000007749	-	99	71.429	Sus_scrofa
ENSDARG00000054164	mrps17	97	67.407	ENSTGUG00000005052	MRPS17	99	67.407	Taeniopygia_guttata
ENSDARG00000054164	mrps17	95	77.863	ENSTRUG00000024068	mrps17	93	76.087	Takifugu_rubripes
ENSDARG00000054164	mrps17	98	75.556	ENSTNIG00000016121	mrps17	91	75.556	Tetraodon_nigroviridis
ENSDARG00000054164	mrps17	67	70.652	ENSTBEG00000007385	-	100	70.652	Tupaia_belangeri
ENSDARG00000054164	mrps17	97	70.677	ENSTTRG00000015139	-	99	70.677	Tursiops_truncatus
ENSDARG00000054164	mrps17	97	71.429	ENSUAMG00000002970	-	99	71.429	Ursus_americanus
ENSDARG00000054164	mrps17	97	72.180	ENSUMAG00000015822	-	99	72.180	Ursus_maritimus
ENSDARG00000054164	mrps17	97	71.429	ENSVVUG00000016664	-	99	71.429	Vulpes_vulpes
ENSDARG00000054164	mrps17	100	66.176	ENSXETG00000010088	mrps17	96	66.176	Xenopus_tropicalis
ENSDARG00000054164	mrps17	81	79.091	ENSXCOG00000009153	mrps17	86	79.091	Xiphophorus_couchianus
ENSDARG00000054164	mrps17	95	73.643	ENSXMAG00000007366	mrps17	91	72.932	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005763	mitochondrial small ribosomal subunit	-	IEA	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process