EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000054290 (Gene tree)
Gene ID: 368893
Gene Symbol: acin1a
Alias: acinusa|acinusl|fc12e10|ik:tdsubc_2g5|si:zc14a17.12|wu:fb04g06|wu:fb40f03|wu:fb68h03|wu:fb80f07|wu:fc12e10|xx:tdsubc_2g5
Full Name: apoptotic chromatin condensation inducer 1a
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 27653 bases
Position: chr2:38197820-38225472
Accession: ZDB-GENE-030616-583
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000104900	SAP	PF02037.27	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000128043	-	3315	XM_005171275	ENSDARP00000104900	857 (aa)	XP_005171332	F1RAV6
ENSDART00000146485	-	4158	XM_005171277	ENSDARP00000121592	1376 (aa)	XP_005171334	F1R6R1
ENSDART00000136082	-	2378	-	ENSDARP00000117109	572 (aa)	-	F1QQ73
ENSDART00000125139	-	803	-	-	- (aa)	-	-
ENSDART00000137395	-	806	-	ENSDARP00000121743	149 (aa)	-	B0R0H9
ENSDART00000144518	-	2523	-	ENSDARP00000113879	548 (aa)	-	B0R0I0
ENSDART00000131901	-	508	-	-	- (aa)	-	-
ENSDART00000142342	-	779	-	ENSDARP00000114736	260 (aa)	-	F1QFN9

Gene Model

Click here to download ENSDARG00000054290's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03013	RNA transport	KEGG
dre03015	mRNA surveillance pathway	KEGG
dre03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000054290's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000054290	acin1a	66	83.696	ENSG00000100813	ACIN1	92	52.870	Homo_sapiens
ENSDARG00000054290	acin1a	69	73.077	ENSACIG00000006218	acin1a	73	71.292	Amphilophus_citrinellus
ENSDARG00000054290	acin1a	79	65.468	ENSATEG00000001677	acin1b	50	65.468	Anabas_testudineus
ENSDARG00000054290	acin1a	72	57.359	ENSACLG00000011103	acin1b	57	61.438	Astatotilapia_calliptera
ENSDARG00000054290	acin1a	68	83.019	ENSCJAG00000008076	ACIN1	50	62.500	Callithrix_jacchus
ENSDARG00000054290	acin1a	71	59.146	ENSCSEG00000004364	acin1b	51	61.585	Cynoglossus_semilaevis
ENSDARG00000054290	acin1a	67	83.696	ENSDNOG00000047667	ACIN1	52	82.857	Dasypus_novemcinctus
ENSDARG00000054290	acin1a	66	92.453	ENSGAFG00000015171	-	72	92.453	Gambusia_affinis
ENSDARG00000054290	acin1a	69	76.271	ENSGGOG00000007403	ACIN1	50	62.500	Gorilla_gorilla
ENSDARG00000054290	acin1a	72	57.359	ENSHBUG00000020274	acin1b	57	61.438	Haplochromis_burtoni
ENSDARG00000054290	acin1a	50	78.095	ENSHCOG00000000814	acin1b	50	78.095	Hippocampus_comes
ENSDARG00000054290	acin1a	64	79.839	ENSIPUG00000006269	acin1b	51	66.047	Ictalurus_punctatus
ENSDARG00000054290	acin1a	68	83.019	ENSSTOG00000007169	ACIN1	50	83.019	Ictidomys_tridecemlineatus
ENSDARG00000054290	acin1a	73	85.714	ENSLACG00000015560	-	51	68.056	Latimeria_chalumnae
ENSDARG00000054290	acin1a	76	66.859	ENSMMOG00000013326	acin1a	60	71.154	Mola_mola
ENSDARG00000054290	acin1a	65	73.123	ENSNBRG00000017740	acin1a	74	71.838	Neolamprologus_brichardi
ENSDARG00000054290	acin1a	68	83.019	ENSNLEG00000014920	ACIN1	50	62.500	Nomascus_leucogenys
ENSDARG00000054290	acin1a	69	74.219	ENSORLG00000007365	acin1b	51	74.219	Oryzias_latipes
ENSDARG00000054290	acin1a	69	74.219	ENSORLG00020007510	acin1b	51	74.219	Oryzias_latipes_hni
ENSDARG00000054290	acin1a	71	67.123	ENSOMEG00000015053	acin1b	52	67.123	Oryzias_melastigma
ENSDARG00000054290	acin1a	68	83.019	ENSPPAG00000041392	ACIN1	50	62.500	Pan_paniscus
ENSDARG00000054290	acin1a	68	83.019	ENSPTRG00000006159	ACIN1	50	62.500	Pan_troglodytes
ENSDARG00000054290	acin1a	52	66.129	ENSPFOG00000009202	acin1b	51	63.399	Poecilia_formosa
ENSDARG00000054290	acin1a	52	66.129	ENSPLAG00000021380	acin1b	51	65.101	Poecilia_latipinna
ENSDARG00000054290	acin1a	52	66.129	ENSPMEG00000000313	acin1b	51	65.101	Poecilia_mexicana
ENSDARG00000054290	acin1a	52	66.667	ENSPREG00000004790	acin1b	51	63.399	Poecilia_reticulata
ENSDARG00000054290	acin1a	68	83.019	ENSRROG00000003676	ACIN1	50	62.500	Rhinopithecus_roxellana
ENSDARG00000054290	acin1a	70	60.645	ENSSMAG00000005897	acin1b	50	62.581	Scophthalmus_maximus
ENSDARG00000054290	acin1a	64	85.106	ENSSDUG00000006437	acin1b	52	61.411	Seriola_dumerili
ENSDARG00000054290	acin1a	68	83.019	ENSSSCG00000002034	ACIN1	53	82.857	Sus_scrofa
ENSDARG00000054290	acin1a	77	82.203	ENSTNIG00000007936	acin1a	54	82.203	Tetraodon_nigroviridis
ENSDARG00000054290	acin1a	64	83.019	ENSVVUG00000019885	ACIN1	50	62.963	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function