EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000054606 (Gene tree)
Gene ID: 553284
Gene Symbol: mrpl1
Alias: si:dkey-58f10.1
Full Name: mitochondrial ribosomal protein L1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 9340 bases
Position: chr5:38825225-38834564
Accession: ZDB-GENE-060526-311
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000071305	Ribosomal_L1	PF00687.21	4.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000076835	-	1042	-	ENSDARP00000071305	324 (aa)	-	F1QMG1

Gene Model

Click here to download ENSDARG00000054606's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000054606's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000054606	mrpl1	76	46.800	ENSG00000169288	MRPL1	97	41.956	Homo_sapiens
ENSDARG00000054606	mrpl1	96	57.372	ENSAPOG00000005831	mrpl1	98	57.051	Acanthochromis_polyacanthus
ENSDARG00000054606	mrpl1	90	61.905	ENSACIG00000002298	mrpl1	98	60.410	Amphilophus_citrinellus
ENSDARG00000054606	mrpl1	96	58.013	ENSAOCG00000006715	mrpl1	98	57.692	Amphiprion_ocellaris
ENSDARG00000054606	mrpl1	77	64.542	ENSAPEG00000020020	mrpl1	84	64.257	Amphiprion_percula
ENSDARG00000054606	mrpl1	97	61.635	ENSATEG00000008760	mrpl1	99	60.692	Anabas_testudineus
ENSDARG00000054606	mrpl1	67	51.835	ENSAPLG00000003428	MRPL1	84	52.174	Anas_platyrhynchos
ENSDARG00000054606	mrpl1	87	42.049	ENSACAG00000012069	MRPL1	60	45.887	Anolis_carolinensis
ENSDARG00000054606	mrpl1	97	40.566	ENSANAG00000035463	-	76	44.130	Aotus_nancymaae
ENSDARG00000054606	mrpl1	71	41.304	ENSANAG00000020317	-	74	41.304	Aotus_nancymaae
ENSDARG00000054606	mrpl1	97	61.950	ENSACLG00000001464	mrpl1	87	60.252	Astatotilapia_calliptera
ENSDARG00000054606	mrpl1	98	59.064	ENSAMXG00000033077	mrpl1	99	59.706	Astyanax_mexicanus
ENSDARG00000054606	mrpl1	97	42.138	ENSCPOG00000031686	MRPL1	98	40.506	Cavia_porcellus
ENSDARG00000054606	mrpl1	98	40.187	ENSCLAG00000005041	MRPL1	98	39.185	Chinchilla_lanigera
ENSDARG00000054606	mrpl1	97	39.308	ENSCANG00000033966	MRPL1	97	38.170	Colobus_angolensis_palliatus
ENSDARG00000054606	mrpl1	96	44.548	ENSCGRG00001005376	-	98	43.438	Cricetulus_griseus_chok1gshd
ENSDARG00000054606	mrpl1	96	44.237	ENSCGRG00000003658	-	98	43.125	Cricetulus_griseus_crigri
ENSDARG00000054606	mrpl1	96	54.777	ENSCSEG00000014014	mrpl1	98	53.797	Cynoglossus_semilaevis
ENSDARG00000054606	mrpl1	96	57.962	ENSCVAG00000021636	mrpl1	98	57.188	Cyprinodon_variegatus
ENSDARG00000054606	mrpl1	97	45.253	ENSDNOG00000001665	MRPL1	96	45.253	Dasypus_novemcinctus
ENSDARG00000054606	mrpl1	96	42.812	ENSDORG00000015752	Mrpl1	94	42.812	Dipodomys_ordii
ENSDARG00000054606	mrpl1	98	39.759	ENSEBUG00000004815	mrpl1	99	38.788	Eptatretus_burgeri
ENSDARG00000054606	mrpl1	97	55.660	ENSELUG00000013391	mrpl1	99	55.660	Esox_lucius
ENSDARG00000054606	mrpl1	96	43.038	ENSFCAG00000013776	MRPL1	76	47.984	Felis_catus
ENSDARG00000054606	mrpl1	87	45.070	ENSFALG00000008527	MRPL1	82	50.644	Ficedula_albicollis
ENSDARG00000054606	mrpl1	97	41.640	ENSFDAG00000011113	MRPL1	97	41.640	Fukomys_damarensis
ENSDARG00000054606	mrpl1	96	56.550	ENSFHEG00000012375	mrpl1	98	56.550	Fundulus_heteroclitus
ENSDARG00000054606	mrpl1	92	42.157	ENSGALG00000010324	MRPL1	93	44.164	Gallus_gallus
ENSDARG00000054606	mrpl1	96	56.051	ENSGAFG00000006089	mrpl1	84	56.051	Gambusia_affinis
ENSDARG00000054606	mrpl1	96	50.160	ENSGAGG00000015092	MRPL1	96	50.000	Gopherus_agassizii
ENSDARG00000054606	mrpl1	97	42.271	ENSGGOG00000001304	MRPL1	97	42.271	Gorilla_gorilla
ENSDARG00000054606	mrpl1	96	61.342	ENSHBUG00000004985	mrpl1	98	61.022	Haplochromis_burtoni
ENSDARG00000054606	mrpl1	97	41.772	ENSHGLG00000006127	MRPL1	98	41.772	Heterocephalus_glaber_female
ENSDARG00000054606	mrpl1	97	41.772	ENSHGLG00100004303	MRPL1	98	41.772	Heterocephalus_glaber_male
ENSDARG00000054606	mrpl1	77	69.323	ENSIPUG00000009866	mrpl1	87	68.898	Ictalurus_punctatus
ENSDARG00000054606	mrpl1	76	47.984	ENSSTOG00000001415	MRPL1	77	47.984	Ictidomys_tridecemlineatus
ENSDARG00000054606	mrpl1	85	45.552	ENSJJAG00000012571	Mrpl1	76	48.178	Jaculus_jaculus
ENSDARG00000054606	mrpl1	97	52.050	ENSKMAG00000004236	mrpl1	100	50.949	Kryptolebias_marmoratus
ENSDARG00000054606	mrpl1	86	55.319	ENSLBEG00000017454	-	90	53.191	Labrus_bergylta
ENSDARG00000054606	mrpl1	76	54.472	ENSLBEG00000013686	-	90	54.074	Labrus_bergylta
ENSDARG00000054606	mrpl1	92	51.656	ENSLACG00000008208	MRPL1	91	51.325	Latimeria_chalumnae
ENSDARG00000054606	mrpl1	98	55.625	ENSLOCG00000007408	mrpl1	99	55.625	Lepisosteus_oculatus
ENSDARG00000054606	mrpl1	85	42.294	ENSMLEG00000030203	MRPL1	87	43.600	Mandrillus_leucophaeus
ENSDARG00000054606	mrpl1	96	60.703	ENSMAMG00000016943	mrpl1	98	59.744	Mastacembelus_armatus
ENSDARG00000054606	mrpl1	96	62.102	ENSMZEG00005020288	mrpl1	98	60.703	Maylandia_zebra
ENSDARG00000054606	mrpl1	79	44.531	ENSMGAG00000005136	MRPL1	84	49.145	Meleagris_gallopavo
ENSDARG00000054606	mrpl1	85	36.101	ENSMAUG00000019228	Mrpl1	84	36.694	Mesocricetus_auratus
ENSDARG00000054606	mrpl1	77	44.922	ENSMICG00000032729	-	93	45.607	Microcebus_murinus
ENSDARG00000054606	mrpl1	95	44.904	ENSMOCG00000017395	Mrpl1	95	43.269	Microtus_ochrogaster
ENSDARG00000054606	mrpl1	76	46.586	ENSMODG00000011704	MRPL1	87	47.200	Monodelphis_domestica
ENSDARG00000054606	mrpl1	95	59.295	ENSMALG00000006393	mrpl1	97	58.199	Monopterus_albus
ENSDARG00000054606	mrpl1	96	44.025	ENSMUSG00000029486	Mrpl1	96	44.099	Mus_musculus
ENSDARG00000054606	mrpl1	96	45.283	MGP_PahariEiJ_G0017208	Mrpl1	96	45.031	Mus_pahari
ENSDARG00000054606	mrpl1	96	44.025	MGP_SPRETEiJ_G0028427	Mrpl1	96	42.857	Mus_spretus
ENSDARG00000054606	mrpl1	93	42.574	ENSMPUG00000006794	MRPL1	93	42.574	Mustela_putorius_furo
ENSDARG00000054606	mrpl1	76	47.390	ENSNGAG00000015669	Mrpl1	79	47.390	Nannospalax_galili
ENSDARG00000054606	mrpl1	94	62.418	ENSNBRG00000016660	mrpl1	96	62.418	Neolamprologus_brichardi
ENSDARG00000054606	mrpl1	79	43.411	ENSODEG00000004206	MRPL1	77	43.725	Octodon_degus
ENSDARG00000054606	mrpl1	97	61.875	ENSONIG00000014024	mrpl1	98	60.502	Oreochromis_niloticus
ENSDARG00000054606	mrpl1	74	46.311	ENSOANG00000003564	MRPL1	87	46.122	Ornithorhynchus_anatinus
ENSDARG00000054606	mrpl1	76	47.791	ENSOCUG00000003852	MRPL1	97	42.405	Oryctolagus_cuniculus
ENSDARG00000054606	mrpl1	96	56.550	ENSORLG00000018859	mrpl1	94	56.869	Oryzias_latipes
ENSDARG00000054606	mrpl1	96	57.235	ENSOMEG00000010049	mrpl1	97	57.235	Oryzias_melastigma
ENSDARG00000054606	mrpl1	75	46.341	ENSOGAG00000012126	MRPL1	83	46.400	Otolemur_garnettii
ENSDARG00000054606	mrpl1	76	46.800	ENSPPAG00000041378	MRPL1	97	41.956	Pan_paniscus
ENSDARG00000054606	mrpl1	96	43.038	ENSPPRG00000009221	MRPL1	76	47.984	Panthera_pardus
ENSDARG00000054606	mrpl1	96	43.038	ENSPTIG00000015465	MRPL1	76	47.984	Panthera_tigris_altaica
ENSDARG00000054606	mrpl1	76	46.800	ENSPTRG00000016199	MRPL1	97	41.956	Pan_troglodytes
ENSDARG00000054606	mrpl1	97	41.509	ENSPANG00000007832	MRPL1	98	40.379	Papio_anubis
ENSDARG00000054606	mrpl1	96	51.250	ENSPKIG00000019299	mrpl1	97	51.875	Paramormyrops_kingsleyae
ENSDARG00000054606	mrpl1	65	56.190	ENSPSIG00000015906	MRPL1	94	56.190	Pelodiscus_sinensis
ENSDARG00000054606	mrpl1	77	62.550	ENSPMGG00000004020	mrpl1	77	63.095	Periophthalmus_magnuspinnatus
ENSDARG00000054606	mrpl1	96	44.720	ENSPEMG00000018072	-	98	43.438	Peromyscus_maniculatus_bairdii
ENSDARG00000054606	mrpl1	99	39.815	ENSPCIG00000029496	-	97	39.815	Phascolarctos_cinereus
ENSDARG00000054606	mrpl1	96	56.688	ENSPFOG00000013095	mrpl1	97	56.688	Poecilia_formosa
ENSDARG00000054606	mrpl1	96	56.550	ENSPLAG00000019871	mrpl1	98	56.550	Poecilia_latipinna
ENSDARG00000054606	mrpl1	96	56.550	ENSPMEG00000015846	mrpl1	98	56.550	Poecilia_mexicana
ENSDARG00000054606	mrpl1	96	55.911	ENSPREG00000003524	mrpl1	98	55.911	Poecilia_reticulata
ENSDARG00000054606	mrpl1	76	46.400	ENSPPYG00000014870	MRPL1	97	41.956	Pongo_abelii
ENSDARG00000054606	mrpl1	97	59.621	ENSPNYG00000006464	mrpl1	98	59.306	Pundamilia_nyererei
ENSDARG00000054606	mrpl1	94	63.057	ENSPNAG00000018662	mrpl1	98	63.462	Pygocentrus_nattereri
ENSDARG00000054606	mrpl1	96	44.375	ENSRNOG00000045785	LOC100359687	96	42.812	Rattus_norvegicus
ENSDARG00000054606	mrpl1	96	45.141	ENSRNOG00000002070	Mrpl1	98	42.947	Rattus_norvegicus
ENSDARG00000054606	mrpl1	97	42.453	ENSRBIG00000040801	MRPL1	98	41.325	Rhinopithecus_bieti
ENSDARG00000054606	mrpl1	97	42.453	ENSRROG00000041586	MRPL1	98	41.325	Rhinopithecus_roxellana
ENSDARG00000054606	mrpl1	97	44.062	ENSSHAG00000001696	MRPL1	97	43.533	Sarcophilus_harrisii
ENSDARG00000054606	mrpl1	97	50.153	ENSSFOG00015014444	mrpl1	98	49.847	Scleropages_formosus
ENSDARG00000054606	mrpl1	96	57.143	ENSSMAG00000015530	mrpl1	97	56.190	Scophthalmus_maximus
ENSDARG00000054606	mrpl1	96	56.230	ENSSDUG00000018458	mrpl1	98	55.591	Seriola_dumerili
ENSDARG00000054606	mrpl1	97	56.013	ENSSLDG00000000399	mrpl1	91	55.380	Seriola_lalandi_dorsalis
ENSDARG00000054606	mrpl1	71	51.304	ENSSPUG00000002005	MRPL1	77	51.282	Sphenodon_punctatus
ENSDARG00000054606	mrpl1	89	55.363	ENSSPAG00000022922	mrpl1	88	55.363	Stegastes_partitus
ENSDARG00000054606	mrpl1	71	50.000	ENSTGUG00000001739	MRPL1	73	50.000	Taeniopygia_guttata
ENSDARG00000054606	mrpl1	97	55.975	ENSTRUG00000004229	mrpl1	99	55.975	Takifugu_rubripes
ENSDARG00000054606	mrpl1	98	57.812	ENSTNIG00000016716	mrpl1	99	57.812	Tetraodon_nigroviridis
ENSDARG00000054606	mrpl1	80	47.510	ENSUMAG00000007973	MRPL1	92	47.984	Ursus_maritimus
ENSDARG00000054606	mrpl1	96	51.220	ENSXETG00000000373	mrpl1	95	51.692	Xenopus_tropicalis
ENSDARG00000054606	mrpl1	96	55.873	ENSXMAG00000002920	mrpl1	98	55.873	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000470	maturation of LSU-rRNA	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0022625	cytosolic large ribosomal subunit	21873635.	IBA	Component