EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000055291 (Gene tree)
Gene ID: 325255
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: RAB18A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 12048 bases
Position: chr12:22921477-22933524
Accession: ZDB-GENE-030131-3980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000072097	MMR_HSR1	PF01926.23	3.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000077631	-	2335	-	ENSDARP00000072097	205 (aa)	-	Q6P129
ENSDART00000136042	-	791	-	ENSDARP00000124063	69 (aa)	-	F8W3J3

Gene Model

Click here to download ENSDARG00000055291's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000055291's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000055291	rab18a	93	41.026	ENSDARG00000034771	rab13	95	41.026
ENSDARG00000055291	rab18a	82	35.882	ENSDARG00000062865	mras	83	35.714
ENSDARG00000055291	rab18a	93	40.513	ENSDARG00000007257	rab5ab	89	40.513
ENSDARG00000055291	rab18a	58	32.500	ENSDARG00000045074	arl4d	59	32.500
ENSDARG00000055291	rab18a	96	31.980	ENSDARG00000098497	hrasa	98	31.980
ENSDARG00000055291	rab18a	71	52.055	ENSDARG00000102078	CABZ01072548.1	74	52.055
ENSDARG00000055291	rab18a	80	48.780	ENSDARG00000037884	rab30	81	48.780
ENSDARG00000055291	rab18a	57	31.967	ENSDARG00000074210	ARF5	55	31.967
ENSDARG00000055291	rab18a	79	46.012	ENSDARG00000103934	megf8	94	46.012
ENSDARG00000055291	rab18a	87	30.899	ENSDARG00000013161	zgc:55558	95	30.899
ENSDARG00000055291	rab18a	100	83.902	ENSDARG00000098344	rab18b	100	83.902
ENSDARG00000055291	rab18a	80	42.169	ENSDARG00000026098	si:dkey-13a21.4	81	42.169
ENSDARG00000055291	rab18a	97	43.781	ENSDARG00000029663	rab1ab	99	43.781
ENSDARG00000055291	rab18a	94	38.308	ENSDARG00000034522	rab6ba	94	38.308
ENSDARG00000055291	rab18a	97	44.279	ENSDARG00000058044	rab1ba	99	44.279
ENSDARG00000055291	rab18a	98	30.000	ENSDARG00000038225	nras	100	30.000
ENSDARG00000055291	rab18a	79	31.325	ENSDARG00000070916	dnajc27	61	31.325
ENSDARG00000055291	rab18a	80	45.122	ENSDARG00000026484	rab15	77	45.122
ENSDARG00000055291	rab18a	94	38.500	ENSDARG00000103714	rab6a	94	38.500
ENSDARG00000055291	rab18a	57	30.508	ENSDARG00000113899	zgc:77650	62	30.508
ENSDARG00000055291	rab18a	82	35.294	ENSDARG00000075285	si:ch73-116o1.2	81	35.294
ENSDARG00000055291	rab18a	81	38.690	ENSDARG00000019312	rab39ba	79	38.690
ENSDARG00000055291	rab18a	79	46.296	ENSDARG00000114797	rab3b	74	46.296
ENSDARG00000055291	rab18a	96	34.500	ENSDARG00000087243	zgc:100918	96	35.204
ENSDARG00000055291	rab18a	97	44.279	ENSDARG00000056479	rab1bb	99	44.279
ENSDARG00000055291	rab18a	80	44.512	ENSDARG00000058800	rab25a	78	44.512
ENSDARG00000055291	rab18a	83	36.628	ENSDARG00000004151	rab23	72	36.628
ENSDARG00000055291	rab18a	81	32.530	ENSDARG00000005651	hrasb	87	32.530
ENSDARG00000055291	rab18a	91	37.766	ENSDARG00000003257	zgc:101559	78	37.766
ENSDARG00000055291	rab18a	79	33.951	ENSDARG00000063321	rabl2	72	33.951
ENSDARG00000055291	rab18a	90	33.333	ENSDARG00000006553	rras	96	34.010
ENSDARG00000055291	rab18a	79	48.780	ENSDARG00000089428	rab12	69	48.780
ENSDARG00000055291	rab18a	80	32.317	ENSDARG00000010844	kras	87	32.317
ENSDARG00000055291	rab18a	80	42.424	ENSDARG00000015807	rab22a	84	42.424
ENSDARG00000055291	rab18a	93	36.598	ENSDARG00000045027	rab9a	97	36.598
ENSDARG00000055291	rab18a	80	45.122	ENSDARG00000090086	rab11bb	75	45.122
ENSDARG00000055291	rab18a	87	46.739	ENSDARG00000020261	rab2a	92	45.178
ENSDARG00000055291	rab18a	80	46.667	ENSDARG00000074246	rab14	76	46.667
ENSDARG00000055291	rab18a	80	37.126	ENSDARG00000020497	rab7a	81	37.126
ENSDARG00000055291	rab18a	80	40.000	ENSDARG00000034215	rab42a	77	40.000
ENSDARG00000055291	rab18a	85	45.714	ENSDARG00000033056	zgc:171927	83	45.714
ENSDARG00000055291	rab18a	80	44.512	ENSDARG00000014340	rab11al	75	44.512
ENSDARG00000055291	rab18a	80	45.732	ENSDARG00000037967	si:dkey-16l2.16	86	58.824
ENSDARG00000055291	rab18a	81	38.690	ENSDARG00000036501	rab39bb	79	38.690
ENSDARG00000055291	rab18a	65	48.889	ENSDARG00000018107	rab3da	80	48.889
ENSDARG00000055291	rab18a	73	35.333	ENSDARG00000036252	rras2	79	35.404
ENSDARG00000055291	rab18a	81	37.126	ENSDARG00000100379	si:dkey-34d22.2	91	37.126
ENSDARG00000055291	rab18a	80	38.095	ENSDARG00000103391	rab9b	83	38.095
ENSDARG00000055291	rab18a	94	39.286	ENSDARG00000018602	rab5aa	90	39.286
ENSDARG00000055291	rab18a	80	44.512	ENSDARG00000041450	rab11a	76	44.512
ENSDARG00000055291	rab18a	87	40.223	ENSDARG00000029885	rab41	83	40.223
ENSDARG00000055291	rab18a	97	46.269	ENSDARG00000052263	rab1aa	99	46.269
ENSDARG00000055291	rab18a	80	48.780	ENSDARG00000058425	rab35b	81	48.780
ENSDARG00000055291	rab18a	80	36.416	ENSDARG00000014058	rab36	66	36.416
ENSDARG00000055291	rab18a	79	43.293	ENSDARG00000102580	CU571310.1	77	43.293
ENSDARG00000055291	rab18a	80	38.323	ENSDARG00000021287	rab7b	82	38.323
ENSDARG00000055291	rab18a	93	40.686	ENSDARG00000035188	rab14l	94	40.686
ENSDARG00000055291	rab18a	80	40.000	ENSDARG00000052290	rab33ba	71	40.000
ENSDARG00000055291	rab18a	71	42.177	ENSDARG00000057394	rab33a	62	42.177
ENSDARG00000055291	rab18a	80	45.122	ENSDARG00000041878	rab11ba	79	45.062
ENSDARG00000055291	rab18a	83	40.351	ENSDARG00000031343	rab6bb	80	40.351
ENSDARG00000055291	rab18a	79	44.444	ENSDARG00000052954	rab25b	77	44.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000055291	rab18a	100	81.951	ENSAPOG00000010760	rab18a	100	81.951	Acanthochromis_polyacanthus
ENSDARG00000055291	rab18a	100	71.220	ENSACIG00000009617	rab18a	100	71.220	Amphilophus_citrinellus
ENSDARG00000055291	rab18a	100	82.439	ENSAOCG00000016233	rab18a	100	82.439	Amphiprion_ocellaris
ENSDARG00000055291	rab18a	100	82.439	ENSAPEG00000005392	rab18a	100	82.439	Amphiprion_percula
ENSDARG00000055291	rab18a	100	81.951	ENSATEG00000021911	rab18a	100	81.951	Anabas_testudineus
ENSDARG00000055291	rab18a	100	82.927	ENSACAG00000005463	-	100	82.927	Anolis_carolinensis
ENSDARG00000055291	rab18a	100	81.951	ENSACLG00000011484	rab18a	100	81.951	Astatotilapia_calliptera
ENSDARG00000055291	rab18a	96	70.051	ENSCPBG00000027619	-	98	70.051	Chrysemys_picta_bellii
ENSDARG00000055291	rab18a	100	82.039	ENSCPBG00000015839	-	100	82.039	Chrysemys_picta_bellii
ENSDARG00000055291	rab18a	98	74.129	ENSCING00000006838	-	100	74.129	Ciona_intestinalis
ENSDARG00000055291	rab18a	97	71.500	ENSCSAVG00000010348	-	99	71.500	Ciona_savignyi
ENSDARG00000055291	rab18a	100	82.439	ENSCSEG00000011816	rab18a	100	82.439	Cynoglossus_semilaevis
ENSDARG00000055291	rab18a	92	84.656	ENSCVAG00000015451	rab18a	100	81.951	Cyprinodon_variegatus
ENSDARG00000055291	rab18a	100	81.951	ENSELUG00000003805	rab18a	100	81.951	Esox_lucius
ENSDARG00000055291	rab18a	92	84.656	ENSFHEG00000019455	rab18a	100	81.951	Fundulus_heteroclitus
ENSDARG00000055291	rab18a	92	84.656	ENSGAFG00000002790	rab18a	100	81.463	Gambusia_affinis
ENSDARG00000055291	rab18a	100	81.553	ENSGAGG00000015642	-	100	81.553	Gopherus_agassizii
ENSDARG00000055291	rab18a	100	81.951	ENSHBUG00000001518	rab18a	100	81.951	Haplochromis_burtoni
ENSDARG00000055291	rab18a	99	82.353	ENSLBEG00000005861	rab18a	95	82.353	Labrus_bergylta
ENSDARG00000055291	rab18a	94	84.896	ENSLACG00000009310	rab18a	100	83.495	Latimeria_chalumnae
ENSDARG00000055291	rab18a	100	82.927	ENSLOCG00000007491	rab18a	100	82.927	Lepisosteus_oculatus
ENSDARG00000055291	rab18a	100	81.951	ENSMAMG00000014320	rab18a	100	81.951	Mastacembelus_armatus
ENSDARG00000055291	rab18a	100	81.463	ENSMZEG00005017235	rab18a	100	81.463	Maylandia_zebra
ENSDARG00000055291	rab18a	100	82.439	ENSMALG00000009813	rab18a	100	82.439	Monopterus_albus
ENSDARG00000055291	rab18a	100	81.951	ENSNBRG00000013507	rab18a	100	81.951	Neolamprologus_brichardi
ENSDARG00000055291	rab18a	92	83.069	ENSORLG00000004624	rab18a	100	80.000	Oryzias_latipes
ENSDARG00000055291	rab18a	92	83.069	ENSORLG00020008333	rab18a	100	80.000	Oryzias_latipes_hni
ENSDARG00000055291	rab18a	92	83.069	ENSORLG00015004739	rab18a	100	80.000	Oryzias_latipes_hsok
ENSDARG00000055291	rab18a	92	83.598	ENSOMEG00000020605	rab18a	100	80.488	Oryzias_melastigma
ENSDARG00000055291	rab18a	100	82.927	ENSPKIG00000009825	rab18a	100	82.927	Paramormyrops_kingsleyae
ENSDARG00000055291	rab18a	100	81.951	ENSPMGG00000020409	-	100	81.951	Periophthalmus_magnuspinnatus
ENSDARG00000055291	rab18a	92	84.656	ENSPFOG00000007571	rab18a	100	81.463	Poecilia_formosa
ENSDARG00000055291	rab18a	92	84.656	ENSPLAG00000010104	rab18a	100	81.463	Poecilia_latipinna
ENSDARG00000055291	rab18a	92	84.656	ENSPMEG00000013085	rab18a	100	81.463	Poecilia_mexicana
ENSDARG00000055291	rab18a	92	84.656	ENSPREG00000005923	rab18a	83	81.463	Poecilia_reticulata
ENSDARG00000055291	rab18a	100	81.951	ENSPNYG00000007064	rab18a	100	81.951	Pundamilia_nyererei
ENSDARG00000055291	rab18a	99	82.759	ENSPNAG00000011548	rab18a	100	82.759	Pygocentrus_nattereri
ENSDARG00000055291	rab18a	100	82.927	ENSSFOG00015017444	rab18a	84	82.927	Scleropages_formosus
ENSDARG00000055291	rab18a	92	86.316	ENSSMAG00000002969	rab18a	100	83.010	Scophthalmus_maximus
ENSDARG00000055291	rab18a	92	85.185	ENSSDUG00000003823	rab18a	100	81.951	Seriola_dumerili
ENSDARG00000055291	rab18a	92	85.185	ENSSLDG00000006977	rab18a	100	81.951	Seriola_lalandi_dorsalis
ENSDARG00000055291	rab18a	94	83.854	ENSSPUG00000017677	-	100	82.039	Sphenodon_punctatus
ENSDARG00000055291	rab18a	100	82.927	ENSTRUG00000004984	rab18a	100	82.927	Takifugu_rubripes
ENSDARG00000055291	rab18a	100	81.068	ENSUMAG00000015574	-	100	81.553	Ursus_maritimus
ENSDARG00000055291	rab18a	100	82.039	ENSXETG00000004556	rab18	100	82.039	Xenopus_tropicalis
ENSDARG00000055291	rab18a	92	84.656	ENSXMAG00000024122	rab18a	100	81.463	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001654	eye development	21473985.	IMP	Process
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005794	Golgi apparatus	21873635.	IBA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process
GO:0034389	lipid droplet organization	21873635.	IBA	Process
GO:0043009	chordate embryonic development	21473985.	IMP	Process