EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000055477 (Gene tree)
Gene ID
394111
Gene Symbol
pelo
Alias
wu:fa12c12|wu:fb97f07|zgc:56550
Full Name
pelota mRNA surveillance and ribosome rescue factor
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Minus strand
Length
17239 bases
Position
chr12:13188616-13205854
Accession
ZDB-GENE-040426-1074
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000072295eRF1_2PF03464.152.7e-3311
ENSDARP00000127006eRF1_2PF03464.151.5e-2511
ENSDARP00000072295eRF1_3PF03465.158.5e-2511
ENSDARP00000072295eRF1_1PF03463.153.1e-5111
ENSDARP00000127006eRF1_1PF03463.155.7e-3011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000152670-717-ENSDARP00000127006199 (aa)-R4GEU3
ENSDART00000077829-2260-ENSDARP00000072295385 (aa)-Q7ZWC4
Gene Model
Click here to download ENSDARG00000055477's gene model file
Pathways
Pathway IDPathway NameSource
dre03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000055477's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000055477pelo10082.078ENSG00000152684PELO10082.078Homo_sapiens
ENSDARG00000055477pelo9980.786ENSAPOG00000000616pelo9092.713Acanthochromis_polyacanthus
ENSDARG00000055477pelo10089.351ENSAPOG00000023072pelo10089.351Acanthochromis_polyacanthus
ENSDARG00000055477pelo9980.786ENSAPOG00000023700-9092.713Acanthochromis_polyacanthus
ENSDARG00000055477pelo10081.818ENSAMEG00000007734PELO10081.818Ailuropoda_melanoleuca
ENSDARG00000055477pelo9784.718ENSACIG00000014386pelo9789.053Amphilophus_citrinellus
ENSDARG00000055477pelo10089.610ENSAOCG00000023717pelo10089.610Amphiprion_ocellaris
ENSDARG00000055477pelo10089.610ENSAPEG00000011235pelo10089.610Amphiprion_percula
ENSDARG00000055477pelo10089.870ENSATEG00000019550pelo10089.870Anabas_testudineus
ENSDARG00000055477pelo7771.812ENSAPLG00000013265PELO10071.812Anas_platyrhynchos
ENSDARG00000055477pelo9781.600ENSACAG00000004352PELO10081.299Anolis_carolinensis
ENSDARG00000055477pelo10081.818ENSANAG00000014096PELO10081.818Aotus_nancymaae
ENSDARG00000055477pelo10088.831ENSACLG00000010305pelo10088.831Astatotilapia_calliptera
ENSDARG00000055477pelo9793.029ENSAMXG00000020299pelo10092.228Astyanax_mexicanus
ENSDARG00000055477pelo10081.299ENSBTAG00000003268PELO9981.299Bos_taurus
ENSDARG00000055477pelo9859.843WBGene00011280pelo-110059.843Caenorhabditis_elegans
ENSDARG00000055477pelo10081.558ENSCJAG00000035190PELO10081.558Callithrix_jacchus
ENSDARG00000055477pelo10082.078ENSCAFG00020023234PELO10082.078Canis_lupus_dingo
ENSDARG00000055477pelo10081.039ENSCHIG00000016410PELO9981.039Capra_hircus
ENSDARG00000055477pelo10081.818ENSTSYG00000005203PELO10081.818Carlito_syrichta
ENSDARG00000055477pelo10081.818ENSCPOG00000027406PELO10081.818Cavia_porcellus
ENSDARG00000055477pelo10081.558ENSCCAG00000035600PELO10081.558Cebus_capucinus
ENSDARG00000055477pelo10081.818ENSCATG00000011829PELO10081.818Cercocebus_atys
ENSDARG00000055477pelo10081.299ENSCLAG00000005043PELO10081.299Chinchilla_lanigera
ENSDARG00000055477pelo10081.818ENSCSAG00000016692PELO10081.818Chlorocebus_sabaeus
ENSDARG00000055477pelo10081.039ENSCHOG00000000523PELO10081.039Choloepus_hoffmanni
ENSDARG00000055477pelo9781.867ENSCPBG00000007544PELO10081.558Chrysemys_picta_bellii
ENSDARG00000055477pelo9665.676ENSCING00000001979-10064.935Ciona_intestinalis
ENSDARG00000055477pelo10066.753ENSCSAVG00000006158-10066.753Ciona_savignyi
ENSDARG00000055477pelo10081.818ENSCANG00000023382PELO10081.818Colobus_angolensis_palliatus
ENSDARG00000055477pelo9782.574ENSCGRG00001024665Pelo10082.078Cricetulus_griseus_chok1gshd
ENSDARG00000055477pelo9783.110ENSCGRG00000004570Pelo10082.597Cricetulus_griseus_crigri
ENSDARG00000055477pelo10088.571ENSCSEG00000008807pelo10088.571Cynoglossus_semilaevis
ENSDARG00000055477pelo10088.052ENSCVAG00000016082pelo10088.052Cyprinodon_variegatus
ENSDARG00000055477pelo10079.016ENSDNOG00000036721PELO10079.016Dasypus_novemcinctus
ENSDARG00000055477pelo10082.338ENSDORG00000016689Pelo10082.338Dipodomys_ordii
ENSDARG00000055477pelo9666.757FBgn0011207pelo9665.455Drosophila_melanogaster
ENSDARG00000055477pelo8074.074ENSEBUG00000004955pelo9975.269Eptatretus_burgeri
ENSDARG00000055477pelo10081.558ENSEASG00005013348PELO10081.558Equus_asinus_asinus
ENSDARG00000055477pelo10091.429ENSELUG00000023229pelo10091.429Esox_lucius
ENSDARG00000055477pelo10082.078ENSFCAG00000032341PELO10082.078Felis_catus
ENSDARG00000055477pelo10082.338ENSFALG00000004559PELO10082.338Ficedula_albicollis
ENSDARG00000055477pelo9971.179ENSFDAG00000002076PELO8882.746Fukomys_damarensis
ENSDARG00000055477pelo10087.792ENSFHEG00000009769pelo10087.792Fundulus_heteroclitus
ENSDARG00000055477pelo9888.594ENSGMOG00000005849pelo10088.052Gadus_morhua
ENSDARG00000055477pelo10087.792ENSGAFG00000019350pelo10087.792Gambusia_affinis
ENSDARG00000055477pelo10089.091ENSGACG00000007245pelo9792.308Gasterosteus_aculeatus
ENSDARG00000055477pelo9782.133ENSGAGG00000004018PELO10081.818Gopherus_agassizii
ENSDARG00000055477pelo10081.818ENSGGOG00000012635PELO10081.818Gorilla_gorilla
ENSDARG00000055477pelo10088.831ENSHBUG00000005866pelo10088.831Haplochromis_burtoni
ENSDARG00000055477pelo10081.039ENSHGLG00000005932PELO10081.039Heterocephalus_glaber_female
ENSDARG00000055477pelo10078.961ENSHGLG00100017627PELO10078.961Heterocephalus_glaber_male
ENSDARG00000055477pelo10087.532ENSHCOG00000016782pelo10087.532Hippocampus_comes
ENSDARG00000055477pelo10092.468ENSIPUG00000020627pelo10092.468Ictalurus_punctatus
ENSDARG00000055477pelo10081.558ENSSTOG00000027378PELO10081.558Ictidomys_tridecemlineatus
ENSDARG00000055477pelo10080.000ENSJJAG00000015032Pelo10080.000Jaculus_jaculus
ENSDARG00000055477pelo10089.091ENSKMAG00000021305pelo10089.091Kryptolebias_marmoratus
ENSDARG00000055477pelo10089.610ENSLBEG00000022399pelo10089.610Labrus_bergylta
ENSDARG00000055477pelo10081.299ENSLAFG00000020551PELO10081.299Loxodonta_africana
ENSDARG00000055477pelo10081.818ENSMFAG00000000651PELO10081.818Macaca_fascicularis
ENSDARG00000055477pelo10081.818ENSMMUG00000039101PELO10081.818Macaca_mulatta
ENSDARG00000055477pelo10081.818ENSMNEG00000035538PELO10081.818Macaca_nemestrina
ENSDARG00000055477pelo10081.818ENSMLEG00000039113PELO10081.818Mandrillus_leucophaeus
ENSDARG00000055477pelo9791.153ENSMAMG00000013260pelo10090.649Mastacembelus_armatus
ENSDARG00000055477pelo10088.831ENSMZEG00005014258pelo10088.831Maylandia_zebra
ENSDARG00000055477pelo10081.818ENSMAUG00000009770Pelo10081.818Mesocricetus_auratus
ENSDARG00000055477pelo10081.558ENSMICG00000044040PELO10081.558Microcebus_murinus
ENSDARG00000055477pelo10081.818ENSMOCG00000017554Pelo10081.818Microtus_ochrogaster
ENSDARG00000055477pelo10088.312ENSMMOG00000001324pelo10088.312Mola_mola
ENSDARG00000055477pelo10089.610ENSMALG00000008194pelo10089.610Monopterus_albus
ENSDARG00000055477pelo10081.818MGP_CAROLIEiJ_G0018915Pelo10081.818Mus_caroli
ENSDARG00000055477pelo10081.818ENSMUSG00000042275Pelo10081.818Mus_musculus
ENSDARG00000055477pelo10082.078MGP_PahariEiJ_G0015985Pelo10082.078Mus_pahari
ENSDARG00000055477pelo10081.818MGP_SPRETEiJ_G0019793Pelo10081.818Mus_spretus
ENSDARG00000055477pelo10080.519ENSMLUG00000024132PELO10080.519Myotis_lucifugus
ENSDARG00000055477pelo10082.338ENSNGAG00000019331Pelo10082.338Nannospalax_galili
ENSDARG00000055477pelo10088.831ENSNBRG00000011799pelo10088.831Neolamprologus_brichardi
ENSDARG00000055477pelo10081.818ENSNLEG00000035970PELO10081.818Nomascus_leucogenys
ENSDARG00000055477pelo10081.039ENSMEUG00000005468PELO10081.039Notamacropus_eugenii
ENSDARG00000055477pelo9681.941ENSOPRG00000018793PELO9881.941Ochotona_princeps
ENSDARG00000055477pelo10081.818ENSODEG00000017579PELO10081.818Octodon_degus
ENSDARG00000055477pelo9688.949ENSONIG00000011511pelo10088.052Oreochromis_niloticus
ENSDARG00000055477pelo10082.078ENSOCUG00000023902PELO10082.078Oryctolagus_cuniculus
ENSDARG00000055477pelo10088.052ENSORLG00000005827pelo10088.052Oryzias_latipes
ENSDARG00000055477pelo10088.312ENSORLG00020016456pelo10088.312Oryzias_latipes_hni
ENSDARG00000055477pelo10088.571ENSORLG00015014447pelo10088.889Oryzias_latipes_hsok
ENSDARG00000055477pelo9991.414ENSOMEG00000021567pelo10089.610Oryzias_melastigma
ENSDARG00000055477pelo10082.078ENSOGAG00000027940PELO10082.078Otolemur_garnettii
ENSDARG00000055477pelo10081.299ENSOARG00000008324PELO9981.299Ovis_aries
ENSDARG00000055477pelo10081.818ENSPPAG00000038951PELO10081.818Pan_paniscus
ENSDARG00000055477pelo10082.078ENSPPRG00000018800PELO10082.078Panthera_pardus
ENSDARG00000055477pelo10082.078ENSPTIG00000019988PELO10082.078Panthera_tigris_altaica
ENSDARG00000055477pelo10081.818ENSPTRG00000034409PELO10081.818Pan_troglodytes
ENSDARG00000055477pelo10081.818ENSPANG00000010902PELO10081.818Papio_anubis
ENSDARG00000055477pelo10092.208ENSPKIG00000015190pelo10092.208Paramormyrops_kingsleyae
ENSDARG00000055477pelo9781.600ENSPSIG00000004971PELO10081.299Pelodiscus_sinensis
ENSDARG00000055477pelo9979.039ENSPMGG00000014561pelo9589.535Periophthalmus_magnuspinnatus
ENSDARG00000055477pelo10081.818ENSPEMG00000015584Pelo10081.818Peromyscus_maniculatus_bairdii
ENSDARG00000055477pelo10081.039ENSPCIG00000004880PELO10081.039Phascolarctos_cinereus
ENSDARG00000055477pelo10088.312ENSPFOG00000007277pelo10088.312Poecilia_formosa
ENSDARG00000055477pelo10088.571ENSPLAG00000020787pelo10088.571Poecilia_latipinna
ENSDARG00000055477pelo10088.312ENSPMEG00000016964pelo10088.312Poecilia_mexicana
ENSDARG00000055477pelo10088.571ENSPREG00000023071pelo10088.571Poecilia_reticulata
ENSDARG00000055477pelo9782.842ENSPPYG00000015451PELO9682.078Pongo_abelii
ENSDARG00000055477pelo10081.558ENSPCOG00000021178PELO10081.558Propithecus_coquereli
ENSDARG00000055477pelo10088.831ENSPNYG00000017325pelo10088.831Pundamilia_nyererei
ENSDARG00000055477pelo9794.370ENSPNAG00000012458pelo9993.247Pygocentrus_nattereri
ENSDARG00000055477pelo10082.597ENSRNOG00000061128Pelo10082.597Rattus_norvegicus
ENSDARG00000055477pelo10081.818ENSRBIG00000007299PELO10081.818Rhinopithecus_bieti
ENSDARG00000055477pelo10081.818ENSRROG00000035507PELO10081.818Rhinopithecus_roxellana
ENSDARG00000055477pelo9432.065YNL001W-9432.065Saccharomyces_cerevisiae
ENSDARG00000055477pelo10081.299ENSSBOG00000036140PELO10081.299Saimiri_boliviensis_boliviensis
ENSDARG00000055477pelo6376.230ENSSHAG00000010770PELO10076.230Sarcophilus_harrisii
ENSDARG00000055477pelo9892.573ENSSFOG00015013399pelo10091.948Scleropages_formosus
ENSDARG00000055477pelo10089.351ENSSMAG00000017171pelo10089.351Scophthalmus_maximus
ENSDARG00000055477pelo10088.571ENSSDUG00000022938pelo10088.571Seriola_dumerili
ENSDARG00000055477pelo10084.935ENSSLDG00000017884pelo10084.935Seriola_lalandi_dorsalis
ENSDARG00000055477pelo9781.600ENSSPUG00000005545PELO10081.299Sphenodon_punctatus
ENSDARG00000055477pelo9890.451ENSSPAG00000008501pelo10089.870Stegastes_partitus
ENSDARG00000055477pelo10080.519ENSSSCG00000016884PELO10080.519Sus_scrofa
ENSDARG00000055477pelo10082.597ENSTGUG00000002416PELO10082.597Taeniopygia_guttata
ENSDARG00000055477pelo10088.831ENSTRUG00000005809pelo10088.831Takifugu_rubripes
ENSDARG00000055477pelo10089.351ENSTNIG00000018937pelo10089.351Tetraodon_nigroviridis
ENSDARG00000055477pelo10080.779ENSTTRG00000001857PELO10080.779Tursiops_truncatus
ENSDARG00000055477pelo10081.818ENSUAMG00000002535PELO10081.818Ursus_americanus
ENSDARG00000055477pelo10081.818ENSUMAG00000005809PELO10081.818Ursus_maritimus
ENSDARG00000055477pelo10081.299ENSVPAG00000001113PELO10081.299Vicugna_pacos
ENSDARG00000055477pelo10082.078ENSVVUG00000025499PELO10082.078Vulpes_vulpes
ENSDARG00000055477pelo8180.000ENSXETG00000018368pelo10078.221Xenopus_tropicalis
ENSDARG00000055477pelo10089.091ENSXMAG00000018474pelo10089.091Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0004518nuclease activity-IEAFunction
GO:0004519endonuclease activity-IEAFunction
GO:0005634nucleus-IEAComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0005737cytoplasm-IEAComponent
GO:0007049cell cycle-IEAProcess
GO:0016787hydrolase activity-IEAFunction
GO:0032790ribosome disassembly21873635.IBAProcess
GO:0043022ribosome binding21873635.IBAFunction
GO:0046872metal ion binding-IEAFunction
GO:0051301cell division-IEAProcess
GO:0070481nuclear-transcribed mRNA catabolic process, non-stop decay-IEAProcess
GO:0070651nonfunctional rRNA decay21873635.IBAProcess
GO:0070966nuclear-transcribed mRNA catabolic process, no-go decay21873635.IBAProcess
GO:0070966nuclear-transcribed mRNA catabolic process, no-go decay-IEAProcess
GO:0071025RNA surveillance-IEAProcess

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