EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000055493 (Gene tree)
Gene ID: 436585
Gene Symbol: hic1
Alias: etID142640.25|zfHIC1
Full Name: hypermethylated in cancer 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 9224 bases
Position: chr15:25681044-25690267
Accession: ZDB-GENE-040713-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000072319	zf-C2H2	PF00096.26	1.9e-24	1	4
ENSDARP00000072319	zf-C2H2	PF00096.26	1.9e-24	2	4
ENSDARP00000072319	zf-C2H2	PF00096.26	1.9e-24	3	4
ENSDARP00000072319	zf-C2H2	PF00096.26	1.9e-24	4	4
ENSDARP00000072319	zf-met	PF12874.7	4.7e-09	1	2
ENSDARP00000072319	zf-met	PF12874.7	4.7e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000077853	-	2517	-	ENSDARP00000072319	737 (aa)	-	Q70ZY9
ENSDART00000148190	-	632	-	ENSDARP00000116361	194 (aa)	-	E9QBS8

Gene Model

Click here to download ENSDARG00000055493's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000055493's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000055493	hic1	85	44.204	ENSDARG00000100497	hic2	99	43.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000055493	hic1	100	47.564	ENSG00000177374	HIC1	100	86.364	Homo_sapiens
ENSDARG00000055493	hic1	100	66.050	ENSAPOG00000020900	hic1	97	66.182	Acanthochromis_polyacanthus
ENSDARG00000055493	hic1	52	82.022	ENSAMEG00000007657	HIC1	68	82.022	Ailuropoda_melanoleuca
ENSDARG00000055493	hic1	100	66.090	ENSACIG00000007124	hic1	100	66.223	Amphilophus_citrinellus
ENSDARG00000055493	hic1	100	66.446	ENSAOCG00000023291	hic1	97	66.227	Amphiprion_ocellaris
ENSDARG00000055493	hic1	100	66.050	ENSAPEG00000008510	hic1	95	68.636	Amphiprion_percula
ENSDARG00000055493	hic1	100	66.223	ENSATEG00000021972	hic1	97	66.534	Anabas_testudineus
ENSDARG00000055493	hic1	100	47.416	ENSANAG00000037442	HIC1	97	48.065	Aotus_nancymaae
ENSDARG00000055493	hic1	100	65.741	ENSACLG00000007589	hic1	97	65.608	Astatotilapia_calliptera
ENSDARG00000055493	hic1	100	74.800	ENSAMXG00000024869	hic1	97	74.533	Astyanax_mexicanus
ENSDARG00000055493	hic1	100	46.419	ENSBTAG00000025130	HIC1	97	49.372	Bos_taurus
ENSDARG00000055493	hic1	100	47.179	ENSCJAG00000042739	HIC1	97	47.590	Callithrix_jacchus
ENSDARG00000055493	hic1	100	46.419	ENSCHIG00000015829	HIC1	97	48.642	Capra_hircus
ENSDARG00000055493	hic1	58	74.510	ENSTSYG00000032991	HIC1	87	74.510	Carlito_syrichta
ENSDARG00000055493	hic1	62	41.632	ENSCCAG00000030944	HIC1	97	48.144	Cebus_capucinus
ENSDARG00000055493	hic1	100	47.692	ENSCATG00000037347	HIC1	97	48.335	Cercocebus_atys
ENSDARG00000055493	hic1	100	47.436	ENSCSAG00000013805	HIC1	97	48.335	Chlorocebus_sabaeus
ENSDARG00000055493	hic1	91	52.187	ENSCPBG00000000255	HIC1	96	52.187	Chrysemys_picta_bellii
ENSDARG00000055493	hic1	100	63.144	ENSCSEG00000013032	hic1	94	63.325	Cynoglossus_semilaevis
ENSDARG00000055493	hic1	100	64.861	ENSCVAG00000019465	hic1	97	64.529	Cyprinodon_variegatus
ENSDARG00000055493	hic1	100	47.692	ENSDNOG00000049226	HIC1	92	48.869	Dasypus_novemcinctus
ENSDARG00000055493	hic1	61	71.324	ENSDORG00000027749	Hic1	56	72.222	Dipodomys_ordii
ENSDARG00000055493	hic1	100	46.976	ENSEASG00005009326	HIC1	100	49.312	Equus_asinus_asinus
ENSDARG00000055493	hic1	100	47.104	ENSECAG00000030580	HIC1	97	49.186	Equus_caballus
ENSDARG00000055493	hic1	100	66.005	ENSELUG00000001329	hic1	97	66.711	Esox_lucius
ENSDARG00000055493	hic1	57	54.869	ENSFALG00000006543	HIC1	99	51.486	Ficedula_albicollis
ENSDARG00000055493	hic1	56	82.022	ENSFDAG00000021489	HIC1	77	77.320	Fukomys_damarensis
ENSDARG00000055493	hic1	100	65.172	ENSFHEG00000003606	hic1	98	65.567	Fundulus_heteroclitus
ENSDARG00000055493	hic1	99	52.830	ENSGALG00000042077	HIC1	96	52.774	Gallus_gallus
ENSDARG00000055493	hic1	100	66.045	ENSGAFG00000012980	hic1	97	66.045	Gambusia_affinis
ENSDARG00000055493	hic1	86	64.363	ENSGACG00000010848	hic1	100	64.760	Gasterosteus_aculeatus
ENSDARG00000055493	hic1	76	57.349	ENSGGOG00000027584	HIC1	55	59.892	Gorilla_gorilla
ENSDARG00000055493	hic1	100	65.741	ENSHBUG00000017815	hic1	97	65.608	Haplochromis_burtoni
ENSDARG00000055493	hic1	100	47.165	ENSHGLG00000012044	HIC1	97	48.796	Heterocephalus_glaber_female
ENSDARG00000055493	hic1	61	71.429	ENSHGLG00100013587	HIC1	75	73.016	Heterocephalus_glaber_male
ENSDARG00000055493	hic1	100	65.252	ENSHCOG00000001420	hic1	97	65.517	Hippocampus_comes
ENSDARG00000055493	hic1	100	76.676	ENSIPUG00000004604	hic1	97	77.273	Ictalurus_punctatus
ENSDARG00000055493	hic1	100	47.815	ENSSTOG00000011792	HIC1	97	49.242	Ictidomys_tridecemlineatus
ENSDARG00000055493	hic1	100	47.503	ENSJJAG00000017367	Hic1	97	49.437	Jaculus_jaculus
ENSDARG00000055493	hic1	100	63.926	ENSKMAG00000005746	hic1	97	64.389	Kryptolebias_marmoratus
ENSDARG00000055493	hic1	100	65.737	ENSLBEG00000021810	hic1	97	66.534	Labrus_bergylta
ENSDARG00000055493	hic1	100	53.785	ENSLACG00000007028	HIC1	97	52.722	Latimeria_chalumnae
ENSDARG00000055493	hic1	78	72.886	ENSLOCG00000006478	hic1	94	68.684	Lepisosteus_oculatus
ENSDARG00000055493	hic1	76	61.176	ENSLAFG00000001259	HIC1	93	56.098	Loxodonta_africana
ENSDARG00000055493	hic1	100	47.436	ENSMFAG00000044684	HIC1	97	48.335	Macaca_fascicularis
ENSDARG00000055493	hic1	100	47.436	ENSMMUG00000048710	HIC1	100	48.335	Macaca_mulatta
ENSDARG00000055493	hic1	100	47.436	ENSMNEG00000013172	HIC1	97	48.335	Macaca_nemestrina
ENSDARG00000055493	hic1	100	66.008	ENSMAMG00000017930	hic1	97	66.931	Mastacembelus_armatus
ENSDARG00000055493	hic1	100	65.741	ENSMZEG00005007499	hic1	98	65.608	Maylandia_zebra
ENSDARG00000055493	hic1	71	65.595	ENSMGAG00000005397	HIC1	96	65.595	Meleagris_gallopavo
ENSDARG00000055493	hic1	100	46.795	ENSMOCG00000001275	Hic1	97	48.323	Microtus_ochrogaster
ENSDARG00000055493	hic1	100	66.050	ENSMMOG00000014282	hic1	99	66.711	Mola_mola
ENSDARG00000055493	hic1	60	64.455	ENSMODG00000010600	HIC1	97	45.725	Monodelphis_domestica
ENSDARG00000055493	hic1	100	61.518	ENSMALG00000011658	hic1	99	61.119	Monopterus_albus
ENSDARG00000055493	hic1	100	47.887	MGP_CAROLIEiJ_G0016730	-	80	49.875	Mus_caroli
ENSDARG00000055493	hic1	82	70.588	ENSMLUG00000010527	HIC1	94	71.429	Myotis_lucifugus
ENSDARG00000055493	hic1	100	47.134	ENSNGAG00000020689	Hic1	97	49.501	Nannospalax_galili
ENSDARG00000055493	hic1	100	65.873	ENSNBRG00000020714	hic1	97	65.741	Neolamprologus_brichardi
ENSDARG00000055493	hic1	100	47.240	ENSODEG00000007964	HIC1	99	48.811	Octodon_degus
ENSDARG00000055493	hic1	100	65.741	ENSONIG00000021060	hic1	100	65.608	Oreochromis_niloticus
ENSDARG00000055493	hic1	100	65.426	ENSORLG00000029930	hic1	97	65.870	Oryzias_latipes
ENSDARG00000055493	hic1	100	65.426	ENSORLG00020008812	hic1	97	65.824	Oryzias_latipes_hni
ENSDARG00000055493	hic1	100	65.426	ENSORLG00015000406	hic1	97	65.824	Oryzias_latipes_hsok
ENSDARG00000055493	hic1	100	65.691	ENSOMEG00000004793	hic1	97	65.957	Oryzias_melastigma
ENSDARG00000055493	hic1	100	47.564	ENSPTRG00000047506	HIC1	97	48.335	Pan_troglodytes
ENSDARG00000055493	hic1	100	56.596	ENSPKIG00000000175	hic1	97	56.858	Paramormyrops_kingsleyae
ENSDARG00000055493	hic1	100	52.053	ENSPKIG00000013932	hic1	99	51.921	Paramormyrops_kingsleyae
ENSDARG00000055493	hic1	79	46.901	ENSPSIG00000007902	HIC1	95	47.304	Pelodiscus_sinensis
ENSDARG00000055493	hic1	100	58.713	ENSPMGG00000011581	hic1	97	58.713	Periophthalmus_magnuspinnatus
ENSDARG00000055493	hic1	100	65.782	ENSPFOG00000004471	hic1	97	65.517	Poecilia_formosa
ENSDARG00000055493	hic1	100	65.293	ENSPLAG00000022329	hic1	97	65.027	Poecilia_latipinna
ENSDARG00000055493	hic1	100	65.782	ENSPMEG00000004584	hic1	97	65.517	Poecilia_mexicana
ENSDARG00000055493	hic1	100	65.650	ENSPREG00000010341	hic1	97	65.385	Poecilia_reticulata
ENSDARG00000055493	hic1	72	71.324	ENSPPYG00000007789	HIC1	87	65.823	Pongo_abelii
ENSDARG00000055493	hic1	62	70.588	ENSPCAG00000000535	HIC1	64	72.222	Procavia_capensis
ENSDARG00000055493	hic1	100	65.873	ENSPNYG00000016207	hic1	97	65.741	Pundamilia_nyererei
ENSDARG00000055493	hic1	100	77.704	ENSPNAG00000001133	hic1	97	77.437	Pygocentrus_nattereri
ENSDARG00000055493	hic1	99	62.791	ENSSFOG00015005452	hic1	97	62.987	Scleropages_formosus
ENSDARG00000055493	hic1	99	55.802	ENSSFOG00015004559	hic1	97	54.665	Scleropages_formosus
ENSDARG00000055493	hic1	100	65.390	ENSSMAG00000009823	hic1	97	65.699	Scophthalmus_maximus
ENSDARG00000055493	hic1	100	65.654	ENSSDUG00000012062	hic1	97	66.579	Seriola_dumerili
ENSDARG00000055493	hic1	100	65.522	ENSSLDG00000002022	hic1	97	66.535	Seriola_lalandi_dorsalis
ENSDARG00000055493	hic1	51	64.730	ENSSARG00000010162	-	55	66.805	Sorex_araneus
ENSDARG00000055493	hic1	92	53.655	ENSSPUG00000007168	HIC1	93	52.555	Sphenodon_punctatus
ENSDARG00000055493	hic1	100	65.435	ENSSPAG00000021973	hic1	100	66.227	Stegastes_partitus
ENSDARG00000055493	hic1	100	47.321	ENSSSCG00000025717	HIC1	97	49.375	Sus_scrofa
ENSDARG00000055493	hic1	99	52.349	ENSTGUG00000005835	HIC1	99	52.941	Taeniopygia_guttata
ENSDARG00000055493	hic1	100	65.303	ENSTRUG00000024667	hic1	97	66.446	Takifugu_rubripes
ENSDARG00000055493	hic1	99	52.011	ENSXETG00000023803	hic1	99	51.478	Xenopus_tropicalis
ENSDARG00000055493	hic1	100	64.901	ENSXCOG00000009641	hic1	100	64.901	Xiphophorus_couchianus
ENSDARG00000055493	hic1	100	65.073	ENSXMAG00000023343	hic1	97	64.807	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	15093138.	IDA	Function
GO:0003700	DNA-binding transcription factor activity	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006974	cellular response to DNA damage stimulus	21873635.	IBA	Process
GO:0008630	intrinsic apoptotic signaling pathway in response to DNA damage	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function