EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000056127 (Gene tree)
Gene ID: 324088
Gene Symbol: polr2gl
Alias: wu:fc18d05|zgc:55297
Full Name: polymerase (RNA) II (DNA directed) polypeptide G-like
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 3428 bases
Position: chr14:26715626-26719053
Accession: ZDB-GENE-030131-2808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000073018	S1	PF00575.23	3.9e-20	1	1
ENSDARP00000073018	SHS2_Rpb7-N	PF03876.17	1.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000078557	-	1477	-	ENSDARP00000073018	172 (aa)	-	Q7ZW41
ENSDART00000148216	-	569	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000056127's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000056127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000056127	polr2gl	100	98.837	ENSG00000168002	POLR2G	100	100.000	Homo_sapiens
ENSDARG00000056127	polr2gl	98	97.633	ENSAPOG00000010949	polr2gl	99	97.633	Acanthochromis_polyacanthus
ENSDARG00000056127	polr2gl	100	98.837	ENSAMEG00000006386	POLR2G	100	98.837	Ailuropoda_melanoleuca
ENSDARG00000056127	polr2gl	98	97.633	ENSACIG00000007252	polr2gl	88	97.633	Amphilophus_citrinellus
ENSDARG00000056127	polr2gl	100	99.419	ENSAOCG00000013628	polr2gl	100	99.419	Amphiprion_ocellaris
ENSDARG00000056127	polr2gl	100	99.419	ENSAPEG00000011229	polr2gl	100	99.419	Amphiprion_percula
ENSDARG00000056127	polr2gl	100	99.419	ENSATEG00000013382	polr2gl	100	99.419	Anabas_testudineus
ENSDARG00000056127	polr2gl	97	99.401	ENSACAG00000001005	POLR2G	97	99.401	Anolis_carolinensis
ENSDARG00000056127	polr2gl	100	98.837	ENSANAG00000037428	POLR2G	100	98.837	Aotus_nancymaae
ENSDARG00000056127	polr2gl	100	97.674	ENSACLG00000014753	polr2gl	100	97.674	Astatotilapia_calliptera
ENSDARG00000056127	polr2gl	100	99.419	ENSAMXG00000030439	polr2gl	100	99.419	Astyanax_mexicanus
ENSDARG00000056127	polr2gl	100	98.837	ENSBTAG00000009483	POLR2G	100	98.837	Bos_taurus
ENSDARG00000056127	polr2gl	100	76.744	WBGene00021845	rpb-7	87	76.744	Caenorhabditis_elegans
ENSDARG00000056127	polr2gl	100	98.837	ENSCJAG00000018688	POLR2G	100	98.837	Callithrix_jacchus
ENSDARG00000056127	polr2gl	55	100.000	ENSCAFG00000015461	POLR2G	81	100.000	Canis_familiaris
ENSDARG00000056127	polr2gl	100	98.837	ENSCAFG00020013136	POLR2G	100	98.837	Canis_lupus_dingo
ENSDARG00000056127	polr2gl	98	98.817	ENSCHIG00000023730	POLR2G	89	98.817	Capra_hircus
ENSDARG00000056127	polr2gl	100	98.256	ENSTSYG00000011918	POLR2G	100	98.256	Carlito_syrichta
ENSDARG00000056127	polr2gl	76	98.473	ENSCAPG00000017572	POLR2G	100	98.473	Cavia_aperea
ENSDARG00000056127	polr2gl	100	98.837	ENSCPOG00000036420	POLR2G	100	98.837	Cavia_porcellus
ENSDARG00000056127	polr2gl	100	89.535	ENSCCAG00000033483	-	95	89.535	Cebus_capucinus
ENSDARG00000056127	polr2gl	100	98.837	ENSCATG00000034443	POLR2G	100	98.837	Cercocebus_atys
ENSDARG00000056127	polr2gl	100	98.837	ENSCLAG00000000802	POLR2G	100	98.837	Chinchilla_lanigera
ENSDARG00000056127	polr2gl	100	98.837	ENSCSAG00000006715	POLR2G	100	98.837	Chlorocebus_sabaeus
ENSDARG00000056127	polr2gl	77	99.248	ENSCHOG00000009928	POLR2G	100	99.248	Choloepus_hoffmanni
ENSDARG00000056127	polr2gl	100	99.419	ENSCPBG00000017972	POLR2G	100	99.419	Chrysemys_picta_bellii
ENSDARG00000056127	polr2gl	100	92.442	ENSCING00000004991	-	100	92.442	Ciona_intestinalis
ENSDARG00000056127	polr2gl	100	87.791	ENSCSAVG00000002667	-	100	87.791	Ciona_savignyi
ENSDARG00000056127	polr2gl	100	98.837	ENSCANG00000043203	POLR2G	100	98.837	Colobus_angolensis_palliatus
ENSDARG00000056127	polr2gl	100	91.860	ENSCGRG00001011370	-	100	91.860	Cricetulus_griseus_chok1gshd
ENSDARG00000056127	polr2gl	100	98.837	ENSCGRG00001022692	-	100	98.837	Cricetulus_griseus_chok1gshd
ENSDARG00000056127	polr2gl	100	98.837	ENSCGRG00000015350	Polr2g	100	98.837	Cricetulus_griseus_crigri
ENSDARG00000056127	polr2gl	98	99.405	ENSCSEG00000011991	polr2gl	90	99.405	Cynoglossus_semilaevis
ENSDARG00000056127	polr2gl	100	99.419	ENSCVAG00000021090	polr2gl	100	99.419	Cyprinodon_variegatus
ENSDARG00000056127	polr2gl	100	98.837	ENSDNOG00000043426	POLR2G	100	98.837	Dasypus_novemcinctus
ENSDARG00000056127	polr2gl	100	61.047	ENSDORG00000015696	-	100	59.884	Dipodomys_ordii
ENSDARG00000056127	polr2gl	100	95.349	ENSDORG00000010351	-	100	95.349	Dipodomys_ordii
ENSDARG00000056127	polr2gl	100	81.977	FBgn0051155	Rpb7	99	81.977	Drosophila_melanogaster
ENSDARG00000056127	polr2gl	100	80.814	ENSETEG00000019637	POLR2G	100	80.814	Echinops_telfairi
ENSDARG00000056127	polr2gl	100	97.093	ENSEBUG00000000439	-	86	97.093	Eptatretus_burgeri
ENSDARG00000056127	polr2gl	100	98.837	ENSEASG00005011357	POLR2G	100	98.837	Equus_asinus_asinus
ENSDARG00000056127	polr2gl	98	98.817	ENSECAG00000021465	POLR2G	87	98.817	Equus_caballus
ENSDARG00000056127	polr2gl	100	66.860	ENSEEUG00000007416	POLR2G	100	66.860	Erinaceus_europaeus
ENSDARG00000056127	polr2gl	100	98.837	ENSELUG00000003401	polr2g	100	98.837	Esox_lucius
ENSDARG00000056127	polr2gl	100	98.837	ENSFCAG00000026072	POLR2G	62	98.837	Felis_catus
ENSDARG00000056127	polr2gl	100	98.837	ENSFDAG00000020977	POLR2G	100	98.837	Fukomys_damarensis
ENSDARG00000056127	polr2gl	100	98.837	ENSFHEG00000003053	polr2gl	100	98.837	Fundulus_heteroclitus
ENSDARG00000056127	polr2gl	95	99.390	ENSGMOG00000000535	polr2gl	100	99.390	Gadus_morhua
ENSDARG00000056127	polr2gl	95	98.171	ENSGAFG00000001773	polr2gl	98	98.171	Gambusia_affinis
ENSDARG00000056127	polr2gl	100	99.419	ENSGACG00000017706	polr2gl	100	99.419	Gasterosteus_aculeatus
ENSDARG00000056127	polr2gl	98	99.405	ENSGAGG00000001303	POLR2G	100	99.405	Gopherus_agassizii
ENSDARG00000056127	polr2gl	100	98.837	ENSGGOG00000011739	POLR2G	100	98.837	Gorilla_gorilla
ENSDARG00000056127	polr2gl	98	95.858	ENSHBUG00000011421	polr2gl	93	95.858	Haplochromis_burtoni
ENSDARG00000056127	polr2gl	100	98.837	ENSHGLG00000004851	POLR2G	100	98.837	Heterocephalus_glaber_female
ENSDARG00000056127	polr2gl	100	93.605	ENSHGLG00100018441	POLR2G	100	93.605	Heterocephalus_glaber_male
ENSDARG00000056127	polr2gl	100	99.419	ENSHCOG00000009499	polr2gl	91	99.419	Hippocampus_comes
ENSDARG00000056127	polr2gl	100	100.000	ENSIPUG00000000671	polr2g	100	100.000	Ictalurus_punctatus
ENSDARG00000056127	polr2gl	100	97.674	ENSSTOG00000004391	POLR2G	100	97.674	Ictidomys_tridecemlineatus
ENSDARG00000056127	polr2gl	100	98.837	ENSJJAG00000005019	Polr2g	100	98.837	Jaculus_jaculus
ENSDARG00000056127	polr2gl	98	99.408	ENSKMAG00000011056	polr2gl	89	99.408	Kryptolebias_marmoratus
ENSDARG00000056127	polr2gl	100	99.419	ENSLBEG00000001458	polr2gl	100	99.419	Labrus_bergylta
ENSDARG00000056127	polr2gl	100	98.837	ENSLACG00000006420	POLR2G	100	98.837	Latimeria_chalumnae
ENSDARG00000056127	polr2gl	100	99.419	ENSLAFG00000004354	POLR2G	100	99.419	Loxodonta_africana
ENSDARG00000056127	polr2gl	100	98.837	ENSMFAG00000033674	POLR2G	100	98.837	Macaca_fascicularis
ENSDARG00000056127	polr2gl	100	98.837	ENSMMUG00000014368	POLR2G	100	98.837	Macaca_mulatta
ENSDARG00000056127	polr2gl	100	98.837	ENSMNEG00000041523	POLR2G	100	98.837	Macaca_nemestrina
ENSDARG00000056127	polr2gl	100	98.837	ENSMLEG00000032928	POLR2G	100	98.837	Mandrillus_leucophaeus
ENSDARG00000056127	polr2gl	95	98.780	ENSMAMG00000001188	polr2gl	100	98.780	Mastacembelus_armatus
ENSDARG00000056127	polr2gl	100	97.674	ENSMZEG00005003618	polr2gl	100	97.674	Maylandia_zebra
ENSDARG00000056127	polr2gl	55	100.000	ENSMAUG00000013079	Polr2g	100	100.000	Mesocricetus_auratus
ENSDARG00000056127	polr2gl	100	99.419	ENSMICG00000009967	POLR2G	100	99.419	Microcebus_murinus
ENSDARG00000056127	polr2gl	99	94.118	ENSMOCG00000010638	Polr2g	98	94.118	Microtus_ochrogaster
ENSDARG00000056127	polr2gl	98	99.408	ENSMMOG00000003102	polr2gl	93	99.408	Mola_mola
ENSDARG00000056127	polr2gl	100	97.674	ENSMODG00000007984	POLR2G	98	99.408	Monodelphis_domestica
ENSDARG00000056127	polr2gl	100	99.419	ENSMALG00000013385	polr2gl	100	99.419	Monopterus_albus
ENSDARG00000056127	polr2gl	100	98.837	MGP_CAROLIEiJ_G0022653	Polr2g	100	98.837	Mus_caroli
ENSDARG00000056127	polr2gl	100	98.837	ENSMUSG00000071662	Polr2g	100	98.837	Mus_musculus
ENSDARG00000056127	polr2gl	100	98.837	MGP_PahariEiJ_G0014148	Polr2g	100	98.837	Mus_pahari
ENSDARG00000056127	polr2gl	100	98.837	MGP_SPRETEiJ_G0023566	Polr2g	100	98.837	Mus_spretus
ENSDARG00000056127	polr2gl	100	98.837	ENSMPUG00000013667	POLR2G	100	98.837	Mustela_putorius_furo
ENSDARG00000056127	polr2gl	100	99.419	ENSMLUG00000011039	-	100	99.419	Myotis_lucifugus
ENSDARG00000056127	polr2gl	100	98.256	ENSMLUG00000003971	-	100	98.256	Myotis_lucifugus
ENSDARG00000056127	polr2gl	100	98.837	ENSNGAG00000020624	Polr2g	100	98.837	Nannospalax_galili
ENSDARG00000056127	polr2gl	94	96.296	ENSNBRG00000003949	polr2gl	100	96.296	Neolamprologus_brichardi
ENSDARG00000056127	polr2gl	98	79.290	ENSNLEG00000004097	-	91	79.290	Nomascus_leucogenys
ENSDARG00000056127	polr2gl	98	99.405	ENSMEUG00000011547	POLR2G	100	99.405	Notamacropus_eugenii
ENSDARG00000056127	polr2gl	100	80.814	ENSOPRG00000014769	POLR2G	100	80.814	Ochotona_princeps
ENSDARG00000056127	polr2gl	100	72.093	ENSODEG00000005609	-	100	72.093	Octodon_degus
ENSDARG00000056127	polr2gl	91	89.103	ENSODEG00000018495	-	100	89.103	Octodon_degus
ENSDARG00000056127	polr2gl	100	98.837	ENSODEG00000002048	-	100	98.837	Octodon_degus
ENSDARG00000056127	polr2gl	100	99.419	ENSONIG00000005183	polr2gl	100	99.419	Oreochromis_niloticus
ENSDARG00000056127	polr2gl	100	99.419	ENSOANG00000005808	POLR2G	100	99.419	Ornithorhynchus_anatinus
ENSDARG00000056127	polr2gl	100	98.837	ENSOCUG00000009485	POLR2G	100	98.837	Oryctolagus_cuniculus
ENSDARG00000056127	polr2gl	100	99.419	ENSORLG00000003154	polr2gl	100	99.419	Oryzias_latipes
ENSDARG00000056127	polr2gl	98	97.633	ENSORLG00020017682	polr2gl	99	97.633	Oryzias_latipes_hni
ENSDARG00000056127	polr2gl	100	99.419	ENSORLG00015018537	polr2gl	100	99.419	Oryzias_latipes_hsok
ENSDARG00000056127	polr2gl	100	99.419	ENSOMEG00000020086	polr2gl	100	99.419	Oryzias_melastigma
ENSDARG00000056127	polr2gl	100	80.682	ENSOGAG00000032720	POLR2G	100	80.682	Otolemur_garnettii
ENSDARG00000056127	polr2gl	98	97.647	ENSOARG00000016984	POLR2G	81	97.647	Ovis_aries
ENSDARG00000056127	polr2gl	100	98.837	ENSPPAG00000039868	POLR2G	100	98.837	Pan_paniscus
ENSDARG00000056127	polr2gl	100	98.837	ENSPPRG00000005669	POLR2G	100	98.837	Panthera_pardus
ENSDARG00000056127	polr2gl	100	94.857	ENSPTIG00000015781	POLR2G	100	94.857	Panthera_tigris_altaica
ENSDARG00000056127	polr2gl	100	98.837	ENSPANG00000025888	POLR2G	100	98.837	Papio_anubis
ENSDARG00000056127	polr2gl	99	98.830	ENSPKIG00000000902	polr2gl	90	98.817	Paramormyrops_kingsleyae
ENSDARG00000056127	polr2gl	100	99.419	ENSPSIG00000004285	POLR2G	82	99.419	Pelodiscus_sinensis
ENSDARG00000056127	polr2gl	100	99.419	ENSPMGG00000008462	polr2gl	100	99.419	Periophthalmus_magnuspinnatus
ENSDARG00000056127	polr2gl	100	98.837	ENSPEMG00000000685	Polr2g	100	98.837	Peromyscus_maniculatus_bairdii
ENSDARG00000056127	polr2gl	100	99.419	ENSPCIG00000015245	-	100	99.419	Phascolarctos_cinereus
ENSDARG00000056127	polr2gl	55	98.947	ENSPFOG00000024274	polr2gl	87	98.947	Poecilia_formosa
ENSDARG00000056127	polr2gl	98	98.817	ENSPLAG00000022848	polr2gl	95	98.817	Poecilia_latipinna
ENSDARG00000056127	polr2gl	100	98.837	ENSPMEG00000009317	polr2gl	100	98.837	Poecilia_mexicana
ENSDARG00000056127	polr2gl	100	98.837	ENSPREG00000016633	polr2gl	100	98.837	Poecilia_reticulata
ENSDARG00000056127	polr2gl	100	87.429	ENSPPYG00000003147	POLR2G	100	87.429	Pongo_abelii
ENSDARG00000056127	polr2gl	100	99.419	ENSPCAG00000016408	POLR2G	100	99.419	Procavia_capensis
ENSDARG00000056127	polr2gl	100	99.419	ENSPCOG00000024131	POLR2G	100	99.419	Propithecus_coquereli
ENSDARG00000056127	polr2gl	100	98.256	ENSPVAG00000003481	POLR2G	100	98.256	Pteropus_vampyrus
ENSDARG00000056127	polr2gl	100	97.674	ENSPNYG00000016136	polr2gl	100	97.674	Pundamilia_nyererei
ENSDARG00000056127	polr2gl	100	99.419	ENSPNAG00000025210	polr2gl	100	99.419	Pygocentrus_nattereri
ENSDARG00000056127	polr2gl	100	98.837	ENSRNOG00000019439	Polr2g	100	98.837	Rattus_norvegicus
ENSDARG00000056127	polr2gl	100	98.837	ENSRBIG00000009173	POLR2G	100	98.837	Rhinopithecus_bieti
ENSDARG00000056127	polr2gl	98	98.225	ENSRROG00000033543	POLR2G	88	79.885	Rhinopithecus_roxellana
ENSDARG00000056127	polr2gl	99	42.197	YDR404C	RPB7	100	42.197	Saccharomyces_cerevisiae
ENSDARG00000056127	polr2gl	100	98.837	ENSSBOG00000015220	POLR2G	100	98.837	Saimiri_boliviensis_boliviensis
ENSDARG00000056127	polr2gl	100	99.419	ENSSHAG00000006006	POLR2G	100	99.419	Sarcophilus_harrisii
ENSDARG00000056127	polr2gl	100	99.419	ENSSFOG00015001245	polr2g	100	99.419	Scleropages_formosus
ENSDARG00000056127	polr2gl	100	98.837	ENSSMAG00000001197	polr2gl	100	98.837	Scophthalmus_maximus
ENSDARG00000056127	polr2gl	100	99.419	ENSSDUG00000015179	polr2gl	100	99.419	Seriola_dumerili
ENSDARG00000056127	polr2gl	100	99.419	ENSSLDG00000001822	polr2gl	100	99.419	Seriola_lalandi_dorsalis
ENSDARG00000056127	polr2gl	100	99.419	ENSSPUG00000008614	POLR2G	100	99.419	Sphenodon_punctatus
ENSDARG00000056127	polr2gl	98	99.408	ENSSPAG00000015276	polr2gl	99	99.408	Stegastes_partitus
ENSDARG00000056127	polr2gl	100	98.837	ENSSSCG00000025571	POLR2G	100	98.837	Sus_scrofa
ENSDARG00000056127	polr2gl	77	98.496	ENSTGUG00000014456	POLR2G	100	98.496	Taeniopygia_guttata
ENSDARG00000056127	polr2gl	100	99.419	ENSTRUG00000002492	polr2gl	100	99.419	Takifugu_rubripes
ENSDARG00000056127	polr2gl	100	81.395	ENSTBEG00000015752	POLR2G	100	81.395	Tupaia_belangeri
ENSDARG00000056127	polr2gl	100	98.837	ENSTTRG00000002478	POLR2G	100	98.837	Tursiops_truncatus
ENSDARG00000056127	polr2gl	100	98.837	ENSUAMG00000025968	POLR2G	100	98.837	Ursus_americanus
ENSDARG00000056127	polr2gl	65	100.000	ENSUMAG00000014537	POLR2G	66	100.000	Ursus_maritimus
ENSDARG00000056127	polr2gl	76	94.615	ENSVPAG00000009534	POLR2G	100	94.615	Vicugna_pacos
ENSDARG00000056127	polr2gl	100	98.837	ENSVVUG00000029844	POLR2G	100	98.837	Vulpes_vulpes
ENSDARG00000056127	polr2gl	100	100.000	ENSXETG00000006022	polr2g	100	100.000	Xenopus_tropicalis
ENSDARG00000056127	polr2gl	98	98.817	ENSXCOG00000002005	polr2gl	93	98.817	Xiphophorus_couchianus
ENSDARG00000056127	polr2gl	98	98.817	ENSXMAG00000010063	polr2gl	93	98.817	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000291	nuclear-transcribed mRNA catabolic process, exonucleolytic	21873635.	IBA	Process
GO:0000932	P-body	21873635.	IBA	Component
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003697	single-stranded DNA binding	21873635.	IBA	Function
GO:0003727	single-stranded RNA binding	21873635.	IBA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005665	RNA polymerase II, core complex	21873635.	IBA	Component
GO:0005665	RNA polymerase II, core complex	-	ISS	Component
GO:0006351	transcription, DNA-templated	-	IEA	Process
GO:0006366	transcription by RNA polymerase II	-	ISS	Process
GO:0006367	transcription initiation from RNA polymerase II promoter	21873635.	IBA	Process
GO:0031369	translation initiation factor binding	21873635.	IBA	Function
GO:0045948	positive regulation of translational initiation	21873635.	IBA	Process
GO:0060213	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	21873635.	IBA	Process