EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000056504 (Gene tree)
Gene ID
550491
Gene Symbol
frg1
Alias
zgc:112426
Full Name
FSHD region gene 1
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Minus strand
Length
15183 bases
Position
chr1:16673841-16689023
Accession
ZDB-GENE-050417-324
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000073458FRG1PF06229.126.2e-8511
ENSDARP00000143283FRG1PF06229.126.2e-8511
ENSDARP00000131976FRG1PF06229.122e-2611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000162729-816-ENSDARP00000136721144 (aa)-A0A0M3HEN0
ENSDART00000158166-881--- (aa)--
ENSDART00000079001-1154-ENSDARP00000073458255 (aa)-Q566W5
ENSDART00000159038-426-ENSDARP0000013197671 (aa)-A0A0M3HEL7
ENSDART00000178599-2707XM_021474756ENSDARP00000143283255 (aa)XP_021330431Q566W5
Gene Model
Click here to download ENSDARG00000056504's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000056504's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000056504frg19382.222ENSG00000109536FRG110083.621Homo_sapiens
ENSDARG00000056504frg110087.324ENSAPOG00000001060frg110084.314Acanthochromis_polyacanthus
ENSDARG00000056504frg19381.481ENSAMEG00000013503FRG110073.643Ailuropoda_melanoleuca
ENSDARG00000056504frg110088.732ENSACIG00000022283frg19986.364Amphilophus_citrinellus
ENSDARG00000056504frg110087.324ENSAOCG00000024240frg18685.455Amphiprion_ocellaris
ENSDARG00000056504frg110085.915ENSAPEG00000002486frg110083.922Amphiprion_percula
ENSDARG00000056504frg110083.099ENSATEG00000010414frg110082.353Anabas_testudineus
ENSDARG00000056504frg110074.609ENSAPLG00000007785-10074.219Anas_platyrhynchos
ENSDARG00000056504frg110076.953ENSACAG00000006877-10076.953Anolis_carolinensis
ENSDARG00000056504frg19382.222ENSANAG00000020876FRG110075.486Aotus_nancymaae
ENSDARG00000056504frg110087.324ENSACLG00000027065frg110077.255Astatotilapia_calliptera
ENSDARG00000056504frg110090.141ENSAMXG00000032700frg110087.109Astyanax_mexicanus
ENSDARG00000056504frg19381.481ENSBTAG00000007089FRG110073.643Bos_taurus
ENSDARG00000056504frg110066.197ENSBTAG00000046517-10067.857Bos_taurus
ENSDARG00000056504frg19344.203WBGene00014177frg-19940.441Caenorhabditis_elegans
ENSDARG00000056504frg19382.222ENSCJAG00000011272FRG110075.486Callithrix_jacchus
ENSDARG00000056504frg19381.481ENSCAFG00000007135FRG110073.643Canis_familiaris
ENSDARG00000056504frg19381.481ENSCAFG00020000082-8577.830Canis_lupus_dingo
ENSDARG00000056504frg110047.887ENSCHIG00000013157-8856.250Capra_hircus
ENSDARG00000056504frg19381.481ENSCHIG00000011585-10073.643Capra_hircus
ENSDARG00000056504frg15174.324ENSCHIG00000013501-8269.792Capra_hircus
ENSDARG00000056504frg19853.968ENSTSYG00000031599-10053.968Carlito_syrichta
ENSDARG00000056504frg110070.423ENSTSYG00000010985-10073.214Carlito_syrichta
ENSDARG00000056504frg19381.481ENSCAPG00000016056-9076.923Cavia_aperea
ENSDARG00000056504frg110075.097ENSCPOG00000022277-10075.097Cavia_porcellus
ENSDARG00000056504frg19382.222ENSCCAG00000024627FRG110075.486Cebus_capucinus
ENSDARG00000056504frg19381.481ENSCATG00000029230FRG110073.643Cercocebus_atys
ENSDARG00000056504frg110075.097ENSCLAG00000000370-10075.097Chinchilla_lanigera
ENSDARG00000056504frg110057.746ENSCLAG00000006068-10052.157Chinchilla_lanigera
ENSDARG00000056504frg19950.593ENSCLAG00000009263-10050.593Chinchilla_lanigera
ENSDARG00000056504frg110061.240ENSCLAG00000004960-10062.791Chinchilla_lanigera
ENSDARG00000056504frg19381.481ENSCSAG00000002899FRG110073.643Chlorocebus_sabaeus
ENSDARG00000056504frg19378.519ENSCSAG00000017729-10073.611Chlorocebus_sabaeus
ENSDARG00000056504frg18481.818ENSCHOG00000000773-7581.818Choloepus_hoffmanni
ENSDARG00000056504frg19380.597ENSCPBG00000009211-8677.828Chrysemys_picta_bellii
ENSDARG00000056504frg19949.064ENSCING00000005161-9949.438Ciona_intestinalis
ENSDARG00000056504frg16955.000ENSCSAVG00000008018-10048.087Ciona_savignyi
ENSDARG00000056504frg19381.481ENSCANG00000020991FRG110073.643Colobus_angolensis_palliatus
ENSDARG00000056504frg19878.873ENSCGRG00001014998Frg110074.031Cricetulus_griseus_chok1gshd
ENSDARG00000056504frg19381.481ENSCGRG00000011860-10074.031Cricetulus_griseus_crigri
ENSDARG00000056504frg19964.286ENSCGRG00000003902-9659.533Cricetulus_griseus_crigri
ENSDARG00000056504frg19381.343ENSCSEG00000015950frg110076.230Cynoglossus_semilaevis
ENSDARG00000056504frg110084.507ENSCVAG00000009985frg110082.353Cyprinodon_variegatus
ENSDARG00000056504frg19381.481ENSDNOG00000014886FRG110073.643Dasypus_novemcinctus
ENSDARG00000056504frg110063.953ENSDORG00000016190Frg110064.729Dipodomys_ordii
ENSDARG00000056504frg110048.864FBgn0036964FRG110048.289Drosophila_melanogaster
ENSDARG00000056504frg19379.259ENSETEG00000012349-10070.930Echinops_telfairi
ENSDARG00000056504frg19967.143ENSEBUG00000012359FRG18957.432Eptatretus_burgeri
ENSDARG00000056504frg15863.095ENSEBUG00000014053frg16661.475Eptatretus_burgeri
ENSDARG00000056504frg110075.875ENSEASG00005017497FRG110075.486Equus_asinus_asinus
ENSDARG00000056504frg110075.875ENSECAG00000003122FRG110075.486Equus_caballus
ENSDARG00000056504frg18482.645ENSEEUG00000000145-10078.981Erinaceus_europaeus
ENSDARG00000056504frg110085.915ENSELUG00000021712frg110081.961Esox_lucius
ENSDARG00000056504frg19381.481ENSFCAG00000025737FRG110073.643Felis_catus
ENSDARG00000056504frg15163.889ENSFCAG00000006586-7366.265Felis_catus
ENSDARG00000056504frg19378.358ENSFALG00000011231-8674.429Ficedula_albicollis
ENSDARG00000056504frg110075.875ENSFDAG00000000962-10075.486Fukomys_damarensis
ENSDARG00000056504frg19773.571ENSFDAG00000012697-9871.028Fukomys_damarensis
ENSDARG00000056504frg110085.915ENSFHEG00000010540frg110080.000Fundulus_heteroclitus
ENSDARG00000056504frg110080.282ENSGMOG00000000867frg110076.863Gadus_morhua
ENSDARG00000056504frg110074.609ENSGALG00000013590-10074.219Gallus_gallus
ENSDARG00000056504frg19379.851ENSGAFG00000013855frg110078.744Gambusia_affinis
ENSDARG00000056504frg110084.507ENSGACG00000016888frg110079.297Gasterosteus_aculeatus
ENSDARG00000056504frg110076.562ENSGAGG00000025012-10075.000Gopherus_agassizii
ENSDARG00000056504frg18362.712ENSGGOG00000043183-8862.000Gorilla_gorilla
ENSDARG00000056504frg19377.037ENSGGOG00000012888-8870.286Gorilla_gorilla
ENSDARG00000056504frg110070.423ENSGGOG00000040796-10047.909Gorilla_gorilla
ENSDARG00000056504frg110087.324ENSHBUG00000010667frg110083.922Haplochromis_burtoni
ENSDARG00000056504frg110064.062ENSHGLG00000001211-10064.062Heterocephalus_glaber_female
ENSDARG00000056504frg110075.875ENSHGLG00000005601FRG110075.875Heterocephalus_glaber_female
ENSDARG00000056504frg19972.656ENSHGLG00000020402-9472.656Heterocephalus_glaber_female
ENSDARG00000056504frg19380.000ENSHGLG00000020943-9971.875Heterocephalus_glaber_female
ENSDARG00000056504frg110060.563ENSHGLG00100015285-10058.594Heterocephalus_glaber_male
ENSDARG00000056504frg19380.000ENSHGLG00100021211-9971.875Heterocephalus_glaber_male
ENSDARG00000056504frg110076.265ENSHGLG00100016261-10076.265Heterocephalus_glaber_male
ENSDARG00000056504frg19062.500ENSHGLG00100013169-9268.932Heterocephalus_glaber_male
ENSDARG00000056504frg110064.453ENSHGLG00100010674-10064.453Heterocephalus_glaber_male
ENSDARG00000056504frg110083.099ENSHCOG00000000224frg19481.448Hippocampus_comes
ENSDARG00000056504frg110085.915ENSIPUG00000022716frg110082.490Ictalurus_punctatus
ENSDARG00000056504frg19381.481ENSSTOG00000002857-10073.256Ictidomys_tridecemlineatus
ENSDARG00000056504frg19380.741ENSJJAG00000020625Frg110073.256Jaculus_jaculus
ENSDARG00000056504frg110084.507ENSKMAG00000005841frg110080.000Kryptolebias_marmoratus
ENSDARG00000056504frg110084.507ENSLBEG00000001466frg110078.824Labrus_bergylta
ENSDARG00000056504frg19378.358ENSLACG00000010243frg110065.900Latimeria_chalumnae
ENSDARG00000056504frg110080.784ENSLOCG00000013868frg110080.784Lepisosteus_oculatus
ENSDARG00000056504frg19380.741ENSLAFG00000011191FRG110072.481Loxodonta_africana
ENSDARG00000056504frg110066.197ENSMFAG00000042873-8968.692Macaca_fascicularis
ENSDARG00000056504frg19381.481ENSMFAG00000031178FRG110073.643Macaca_fascicularis
ENSDARG00000056504frg19381.481ENSMMUG00000001824FRG110073.643Macaca_mulatta
ENSDARG00000056504frg19468.841ENSMMUG00000047496-8768.473Macaca_mulatta
ENSDARG00000056504frg15163.014ENSMNEG00000013798-8462.025Macaca_nemestrina
ENSDARG00000056504frg19374.074ENSMNEG00000018620FRG110068.826Macaca_nemestrina
ENSDARG00000056504frg19381.481ENSMLEG00000028881FRG110073.643Mandrillus_leucophaeus
ENSDARG00000056504frg110085.915ENSMAMG00000012406frg110081.961Mastacembelus_armatus
ENSDARG00000056504frg110087.324ENSMZEG00005007549frg110083.529Maylandia_zebra
ENSDARG00000056504frg110075.000ENSMGAG00000011481-10074.609Meleagris_gallopavo
ENSDARG00000056504frg19381.481ENSMAUG00000000847Frg110073.643Mesocricetus_auratus
ENSDARG00000056504frg19381.481ENSMICG00000046816FRG110073.643Microcebus_murinus
ENSDARG00000056504frg110070.423ENSMOCG00000023000Frg110067.315Microtus_ochrogaster
ENSDARG00000056504frg19985.714ENSMMOG00000004008frg19481.818Mola_mola
ENSDARG00000056504frg19381.481ENSMODG00000019031-8772.868Monodelphis_domestica
ENSDARG00000056504frg110088.732ENSMALG00000018497frg110081.176Monopterus_albus
ENSDARG00000056504frg19381.481MGP_CAROLIEiJ_G0031006Frg110073.643Mus_caroli
ENSDARG00000056504frg19381.481ENSMUSG00000031590Frg110073.643Mus_musculus
ENSDARG00000056504frg19380.741MGP_PahariEiJ_G0021475Frg110073.256Mus_pahari
ENSDARG00000056504frg19380.741MGP_SPRETEiJ_G0032120Frg110073.256Mus_spretus
ENSDARG00000056504frg19381.481ENSMPUG00000017962FRG110073.643Mustela_putorius_furo
ENSDARG00000056504frg110075.097ENSMLUG00000023179FRG110075.486Myotis_lucifugus
ENSDARG00000056504frg19382.222ENSNGAG00000016411Frg110073.643Nannospalax_galili
ENSDARG00000056504frg19783.099ENSNBRG00000006806frg19575.845Neolamprologus_brichardi
ENSDARG00000056504frg110069.014ENSNLEG00000032846-10067.857Nomascus_leucogenys
ENSDARG00000056504frg18566.667ENSNLEG00000027050-10071.287Nomascus_leucogenys
ENSDARG00000056504frg110066.197ENSNLEG00000032333-10062.791Nomascus_leucogenys
ENSDARG00000056504frg19370.370ENSNLEG00000036059-8670.149Nomascus_leucogenys
ENSDARG00000056504frg110075.097ENSNLEG00000000930FRG110074.708Nomascus_leucogenys
ENSDARG00000056504frg18364.407ENSNLEG00000007749-8068.687Nomascus_leucogenys
ENSDARG00000056504frg110066.667ENSNLEG00000035849-10064.751Nomascus_leucogenys
ENSDARG00000056504frg19756.522ENSNLEG00000031830-8467.089Nomascus_leucogenys
ENSDARG00000056504frg19369.630ENSNLEG00000028874-9168.159Nomascus_leucogenys
ENSDARG00000056504frg110071.831ENSMEUG00000007509-5975.658Notamacropus_eugenii
ENSDARG00000056504frg19380.741ENSOPRG00000004722-10062.403Ochotona_princeps
ENSDARG00000056504frg19269.925ENSODEG00000006953-10056.250Octodon_degus
ENSDARG00000056504frg110075.097ENSODEG00000006458-10075.097Octodon_degus
ENSDARG00000056504frg110086.111ENSONIG00000010162frg110084.766Oreochromis_niloticus
ENSDARG00000056504frg110071.831ENSOANG00000005659-8671.134Ornithorhynchus_anatinus
ENSDARG00000056504frg19381.481ENSOCUG00000009038-10072.868Oryctolagus_cuniculus
ENSDARG00000056504frg19385.821ENSORLG00000008106frg18982.787Oryzias_latipes
ENSDARG00000056504frg110085.915ENSORLG00020014355frg110083.529Oryzias_latipes_hni
ENSDARG00000056504frg110085.915ENSORLG00015014159frg110083.529Oryzias_latipes_hsok
ENSDARG00000056504frg19386.567ENSOMEG00000002468frg18980.093Oryzias_melastigma
ENSDARG00000056504frg19381.481ENSOGAG00000005749-10073.256Otolemur_garnettii
ENSDARG00000056504frg19381.481ENSOARG00000008592FRG110071.648Ovis_aries
ENSDARG00000056504frg19756.522ENSOARG00000002012-8661.207Ovis_aries
ENSDARG00000056504frg18267.241ENSPPAG00000019769-10070.297Pan_paniscus
ENSDARG00000056504frg19360.000ENSPPAG00000043174-10053.543Pan_paniscus
ENSDARG00000056504frg19382.222ENSPPAG00000043170-10073.611Pan_paniscus
ENSDARG00000056504frg18064.912ENSPPAG00000041928-7669.000Pan_paniscus
ENSDARG00000056504frg110072.374ENSPPRG00000019777-10072.763Panthera_pardus
ENSDARG00000056504frg19380.741ENSPPRG00000025003-10073.256Panthera_pardus
ENSDARG00000056504frg19380.741ENSPTIG00000006588-10073.256Panthera_tigris_altaica
ENSDARG00000056504frg110072.763ENSPTIG00000006566-10073.152Panthera_tigris_altaica
ENSDARG00000056504frg19382.222ENSPTRG00000016671-10074.031Pan_troglodytes
ENSDARG00000056504frg19382.222ENSPTRG00000050205-10074.031Pan_troglodytes
ENSDARG00000056504frg18761.290ENSPTRG00000013348-9766.346Pan_troglodytes
ENSDARG00000056504frg19366.667ENSPTRG00000052363-9768.269Pan_troglodytes
ENSDARG00000056504frg19367.153ENSPTRG00000044710-10060.324Pan_troglodytes
ENSDARG00000056504frg16860.417ENSPTRG00000046738-6966.327Pan_troglodytes
ENSDARG00000056504frg19367.883ENSPTRG00000050204-10059.919Pan_troglodytes
ENSDARG00000056504frg19370.803ENSPTRG00000043123-9462.232Pan_troglodytes
ENSDARG00000056504frg17283.810ENSPANG00000031530-8468.333Papio_anubis
ENSDARG00000056504frg18364.407ENSPANG00000032825-10065.672Papio_anubis
ENSDARG00000056504frg19383.582ENSPKIG00000024189frg110075.000Paramormyrops_kingsleyae
ENSDARG00000056504frg19380.597ENSPSIG00000017971-8278.140Pelodiscus_sinensis
ENSDARG00000056504frg19384.328ENSPMGG00000019273frg110073.896Periophthalmus_magnuspinnatus
ENSDARG00000056504frg19381.481ENSPEMG00000000650Frg110073.643Peromyscus_maniculatus_bairdii
ENSDARG00000056504frg19380.000ENSPCIG00000007530-6972.868Phascolarctos_cinereus
ENSDARG00000056504frg110081.690ENSPFOG00000006721frg110079.216Poecilia_formosa
ENSDARG00000056504frg110081.690ENSPMEG00000013816frg110079.216Poecilia_mexicana
ENSDARG00000056504frg110081.690ENSPREG00000000097frg110079.216Poecilia_reticulata
ENSDARG00000056504frg19280.451ENSPPYG00000029810-10079.310Pongo_abelii
ENSDARG00000056504frg18574.590ENSPPYG00000011275-8772.152Pongo_abelii
ENSDARG00000056504frg15169.863ENSPPYG00000019865-8467.089Pongo_abelii
ENSDARG00000056504frg18563.333ENSPPYG00000029891-10067.606Pongo_abelii
ENSDARG00000056504frg19379.259ENSPCAG00000014953-10070.325Procavia_capensis
ENSDARG00000056504frg18859.375ENSPCOG00000022726FRG19459.606Propithecus_coquereli
ENSDARG00000056504frg110070.423ENSPVAG00000010551FRG110060.078Pteropus_vampyrus
ENSDARG00000056504frg110087.324ENSPNYG00000015209frg17485.465Pundamilia_nyererei
ENSDARG00000056504frg110088.732ENSPNAG00000013259frg110081.176Pygocentrus_nattereri
ENSDARG00000056504frg19381.481ENSRNOG00000009846Frg110073.643Rattus_norvegicus
ENSDARG00000056504frg19380.741ENSRBIG00000042219-9472.444Rhinopithecus_bieti
ENSDARG00000056504frg19472.794ENSRROG00000032084-9465.385Rhinopithecus_roxellana
ENSDARG00000056504frg110070.930ENSRROG00000015523FRG110070.543Rhinopithecus_roxellana
ENSDARG00000056504frg19382.222ENSSBOG00000034175FRG110075.486Saimiri_boliviensis_boliviensis
ENSDARG00000056504frg19379.259ENSSHAG00000005886-10071.705Sarcophilus_harrisii
ENSDARG00000056504frg19981.429ENSSFOG00015021361frg19976.800Scleropages_formosus
ENSDARG00000056504frg110081.690ENSSMAG00000001213frg110079.216Scophthalmus_maximus
ENSDARG00000056504frg110085.915ENSSDUG00000018886frg110082.745Seriola_dumerili
ENSDARG00000056504frg110085.915ENSSLDG00000024191frg110081.961Seriola_lalandi_dorsalis
ENSDARG00000056504frg19279.851ENSSARG00000002471-9176.163Sorex_araneus
ENSDARG00000056504frg19381.343ENSSPUG00000017326-9675.962Sphenodon_punctatus
ENSDARG00000056504frg110088.732ENSSPAG00000013294frg110078.431Stegastes_partitus
ENSDARG00000056504frg19381.481ENSSSCG00000006996FRG110073.643Sus_scrofa
ENSDARG00000056504frg18578.862ENSTGUG00000016714-10078.862Taeniopygia_guttata
ENSDARG00000056504frg110073.828ENSTGUG00000007028-10071.484Taeniopygia_guttata
ENSDARG00000056504frg110081.690ENSTRUG00000016208frg110079.216Takifugu_rubripes
ENSDARG00000056504frg110085.915ENSTNIG00000007128frg110079.216Tetraodon_nigroviridis
ENSDARG00000056504frg110073.256ENSTBEG00000014491-10072.868Tupaia_belangeri
ENSDARG00000056504frg19248.120ENSTBEG00000017605-9947.980Tupaia_belangeri
ENSDARG00000056504frg110060.563ENSTBEG00000012789-9951.659Tupaia_belangeri
ENSDARG00000056504frg19381.481ENSTTRG00000003429FRG110072.868Tursiops_truncatus
ENSDARG00000056504frg19381.481ENSUAMG00000012123-10070.204Ursus_americanus
ENSDARG00000056504frg19381.481ENSUMAG00000021119FRG110073.643Ursus_maritimus
ENSDARG00000056504frg19380.000ENSVPAG00000000616FRG110071.318Vicugna_pacos
ENSDARG00000056504frg19380.741ENSVPAG00000011977-9376.923Vicugna_pacos
ENSDARG00000056504frg19381.481ENSVVUG00000007181-7777.830Vulpes_vulpes
ENSDARG00000056504frg110074.609ENSXETG00000012470frg110074.609Xenopus_tropicalis
ENSDARG00000056504frg110081.690ENSXCOG00000005312frg110074.118Xiphophorus_couchianus
ENSDARG00000056504frg110081.690ENSXMAG00000007751frg110079.608Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005730nucleolus21873635.IBAComponent
GO:0051015actin filament binding21873635.IBAFunction
GO:0055120striated muscle dense body21873635.IBAComponent
GO:0071013catalytic step 2 spliceosome21873635.IBAComponent

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