EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000056517 (Gene tree)
Gene ID: 445302
Gene Symbol: thoc3
Alias: zgc:100815
Full Name: THO complex 3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5488 bases
Position: chr14:25505468-25510955
Accession: ZDB-GENE-040808-14
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000073472	eIF2A	PF08662.11	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000079016	-	1477	-	ENSDARP00000073472	322 (aa)	-	Q6AXK9

Gene Model

Click here to download ENSDARG00000056517's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03013	RNA transport	KEGG
dre03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000056517's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000056517	thoc3	99	91.250	ENSG00000051596	THOC3	91	91.250	Homo_sapiens
ENSDARG00000056517	thoc3	100	95.963	ENSAPOG00000010591	thoc3	100	95.963	Acanthochromis_polyacanthus
ENSDARG00000056517	thoc3	99	91.250	ENSAMEG00000006936	THOC3	91	91.250	Ailuropoda_melanoleuca
ENSDARG00000056517	thoc3	100	94.410	ENSACIG00000010364	thoc3	100	94.410	Amphilophus_citrinellus
ENSDARG00000056517	thoc3	100	95.963	ENSAOCG00000013548	thoc3	100	95.963	Amphiprion_ocellaris
ENSDARG00000056517	thoc3	100	95.963	ENSAPEG00000003216	thoc3	100	95.963	Amphiprion_percula
ENSDARG00000056517	thoc3	100	95.342	ENSATEG00000017937	thoc3	100	95.342	Anabas_testudineus
ENSDARG00000056517	thoc3	99	91.250	ENSANAG00000036291	THOC3	91	91.250	Aotus_nancymaae
ENSDARG00000056517	thoc3	100	94.720	ENSACLG00000017219	thoc3	100	94.720	Astatotilapia_calliptera
ENSDARG00000056517	thoc3	100	97.826	ENSAMXG00000010750	thoc3	100	97.826	Astyanax_mexicanus
ENSDARG00000056517	thoc3	99	91.824	ENSBTAG00000035174	THOC3	91	91.824	Bos_taurus
ENSDARG00000056517	thoc3	99	90.625	ENSCJAG00000046031	THOC3	86	90.625	Callithrix_jacchus
ENSDARG00000056517	thoc3	99	91.250	ENSCAFG00000014320	THOC3	91	91.250	Canis_familiaris
ENSDARG00000056517	thoc3	99	91.250	ENSCAFG00020011477	THOC3	91	91.250	Canis_lupus_dingo
ENSDARG00000056517	thoc3	99	91.250	ENSCHIG00000021665	THOC3	91	91.250	Capra_hircus
ENSDARG00000056517	thoc3	97	69.551	ENSTSYG00000009507	-	91	69.551	Carlito_syrichta
ENSDARG00000056517	thoc3	99	72.727	ENSCPOG00000025805	THOC3	89	75.862	Cavia_porcellus
ENSDARG00000056517	thoc3	99	91.250	ENSCATG00000029038	THOC3	91	91.250	Cercocebus_atys
ENSDARG00000056517	thoc3	99	91.536	ENSCLAG00000015924	THOC3	91	91.536	Chinchilla_lanigera
ENSDARG00000056517	thoc3	99	91.250	ENSCSAG00000009454	THOC3	91	91.250	Chlorocebus_sabaeus
ENSDARG00000056517	thoc3	82	93.939	ENSCPBG00000022672	THOC3	81	93.939	Chrysemys_picta_bellii
ENSDARG00000056517	thoc3	98	66.667	ENSCSAVG00000011041	-	99	66.667	Ciona_savignyi
ENSDARG00000056517	thoc3	99	91.250	ENSCANG00000008964	THOC3	91	91.250	Colobus_angolensis_palliatus
ENSDARG00000056517	thoc3	99	91.562	ENSCGRG00001022944	Thoc3	84	91.562	Cricetulus_griseus_chok1gshd
ENSDARG00000056517	thoc3	99	91.562	ENSCGRG00000012133	Thoc3	91	91.562	Cricetulus_griseus_crigri
ENSDARG00000056517	thoc3	100	94.720	ENSCVAG00000006941	thoc3	100	94.720	Cyprinodon_variegatus
ENSDARG00000056517	thoc3	99	91.562	ENSDNOG00000037214	THOC3	91	91.562	Dasypus_novemcinctus
ENSDARG00000056517	thoc3	81	93.893	ENSDORG00000014084	Thoc3	89	93.893	Dipodomys_ordii
ENSDARG00000056517	thoc3	97	63.462	FBgn0037569	tex	97	63.462	Drosophila_melanogaster
ENSDARG00000056517	thoc3	99	90.625	ENSETEG00000020137	THOC3	91	90.625	Echinops_telfairi
ENSDARG00000056517	thoc3	100	84.568	ENSEBUG00000004516	thoc3	100	84.568	Eptatretus_burgeri
ENSDARG00000056517	thoc3	99	91.250	ENSEASG00005011970	THOC3	91	91.250	Equus_asinus_asinus
ENSDARG00000056517	thoc3	99	91.250	ENSECAG00000011555	THOC3	91	91.250	Equus_caballus
ENSDARG00000056517	thoc3	100	95.963	ENSELUG00000022058	thoc3	100	95.963	Esox_lucius
ENSDARG00000056517	thoc3	99	92.188	ENSFALG00000008536	THOC3	94	92.188	Ficedula_albicollis
ENSDARG00000056517	thoc3	99	91.536	ENSFDAG00000015062	THOC3	91	91.536	Fukomys_damarensis
ENSDARG00000056517	thoc3	100	94.720	ENSFHEG00000019958	thoc3	100	94.720	Fundulus_heteroclitus
ENSDARG00000056517	thoc3	100	95.342	ENSGMOG00000019136	-	100	95.342	Gadus_morhua
ENSDARG00000056517	thoc3	98	91.167	ENSGALG00000024172	THOC3	83	91.167	Gallus_gallus
ENSDARG00000056517	thoc3	100	95.031	ENSGAFG00000016531	thoc3	98	95.031	Gambusia_affinis
ENSDARG00000056517	thoc3	100	95.652	ENSGACG00000016353	thoc3	100	95.652	Gasterosteus_aculeatus
ENSDARG00000056517	thoc3	99	91.875	ENSGAGG00000013237	THOC3	99	91.875	Gopherus_agassizii
ENSDARG00000056517	thoc3	99	91.250	ENSGGOG00000012127	-	91	91.250	Gorilla_gorilla
ENSDARG00000056517	thoc3	100	94.720	ENSHBUG00000023812	thoc3	100	94.720	Haplochromis_burtoni
ENSDARG00000056517	thoc3	99	91.250	ENSHGLG00000008773	THOC3	91	91.250	Heterocephalus_glaber_female
ENSDARG00000056517	thoc3	99	91.250	ENSHGLG00100013354	THOC3	91	91.250	Heterocephalus_glaber_male
ENSDARG00000056517	thoc3	100	89.752	ENSHCOG00000003522	thoc3	100	89.752	Hippocampus_comes
ENSDARG00000056517	thoc3	100	97.826	ENSIPUG00000001292	thoc3	95	97.826	Ictalurus_punctatus
ENSDARG00000056517	thoc3	99	90.625	ENSJJAG00000010704	Thoc3	91	90.625	Jaculus_jaculus
ENSDARG00000056517	thoc3	100	93.789	ENSKMAG00000017815	thoc3	100	93.789	Kryptolebias_marmoratus
ENSDARG00000056517	thoc3	100	94.720	ENSLBEG00000006512	thoc3	100	94.720	Labrus_bergylta
ENSDARG00000056517	thoc3	100	92.857	ENSLACG00000014556	THOC3	100	92.857	Latimeria_chalumnae
ENSDARG00000056517	thoc3	100	96.584	ENSLOCG00000011610	thoc3	99	96.584	Lepisosteus_oculatus
ENSDARG00000056517	thoc3	99	91.250	ENSLAFG00000016609	THOC3	91	91.250	Loxodonta_africana
ENSDARG00000056517	thoc3	99	91.250	ENSMFAG00000034476	THOC3	91	91.250	Macaca_fascicularis
ENSDARG00000056517	thoc3	99	91.250	ENSMMUG00000018737	THOC3	91	91.250	Macaca_mulatta
ENSDARG00000056517	thoc3	99	91.250	ENSMNEG00000043023	THOC3	91	91.250	Macaca_nemestrina
ENSDARG00000056517	thoc3	99	91.250	ENSMLEG00000002508	THOC3	91	91.250	Mandrillus_leucophaeus
ENSDARG00000056517	thoc3	100	95.342	ENSMAMG00000013229	thoc3	99	95.597	Mastacembelus_armatus
ENSDARG00000056517	thoc3	100	94.720	ENSMZEG00005020327	thoc3	100	94.720	Maylandia_zebra
ENSDARG00000056517	thoc3	82	94.297	ENSMGAG00000004766	THOC3	99	94.297	Meleagris_gallopavo
ENSDARG00000056517	thoc3	99	91.562	ENSMAUG00000011225	Thoc3	91	91.562	Mesocricetus_auratus
ENSDARG00000056517	thoc3	99	91.562	ENSMICG00000028441	-	91	91.562	Microcebus_murinus
ENSDARG00000056517	thoc3	99	79.688	ENSMICG00000031354	-	91	79.688	Microcebus_murinus
ENSDARG00000056517	thoc3	99	91.562	ENSMOCG00000015290	Thoc3	91	91.562	Microtus_ochrogaster
ENSDARG00000056517	thoc3	100	95.963	ENSMMOG00000000373	thoc3	100	95.963	Mola_mola
ENSDARG00000056517	thoc3	99	75.000	ENSMODG00000025275	-	97	75.000	Monodelphis_domestica
ENSDARG00000056517	thoc3	99	91.562	ENSMODG00000005339	THOC3	91	91.562	Monodelphis_domestica
ENSDARG00000056517	thoc3	100	94.410	ENSMALG00000002645	thoc3	100	94.410	Monopterus_albus
ENSDARG00000056517	thoc3	99	91.562	MGP_CAROLIEiJ_G0018534	Thoc3	91	91.562	Mus_caroli
ENSDARG00000056517	thoc3	99	91.562	ENSMUSG00000025872	Thoc3	91	91.562	Mus_musculus
ENSDARG00000056517	thoc3	99	91.562	MGP_PahariEiJ_G0019599	Thoc3	91	91.562	Mus_pahari
ENSDARG00000056517	thoc3	99	91.562	MGP_SPRETEiJ_G0019414	Thoc3	91	91.562	Mus_spretus
ENSDARG00000056517	thoc3	84	90.441	ENSMPUG00000012598	THOC3	77	90.441	Mustela_putorius_furo
ENSDARG00000056517	thoc3	99	86.478	ENSMLUG00000026903	-	93	86.478	Myotis_lucifugus
ENSDARG00000056517	thoc3	99	88.438	ENSMLUG00000027411	-	93	88.438	Myotis_lucifugus
ENSDARG00000056517	thoc3	99	91.562	ENSMLUG00000005412	-	91	91.562	Myotis_lucifugus
ENSDARG00000056517	thoc3	99	91.562	ENSNGAG00000010934	-	91	91.562	Nannospalax_galili
ENSDARG00000056517	thoc3	99	95.283	ENSNBRG00000013917	thoc3	92	95.283	Neolamprologus_brichardi
ENSDARG00000056517	thoc3	99	90.938	ENSNLEG00000000593	THOC3	91	90.938	Nomascus_leucogenys
ENSDARG00000056517	thoc3	98	69.401	ENSMEUG00000013439	-	98	69.401	Notamacropus_eugenii
ENSDARG00000056517	thoc3	99	91.875	ENSMEUG00000001068	THOC3	91	91.875	Notamacropus_eugenii
ENSDARG00000056517	thoc3	99	91.536	ENSODEG00000010186	THOC3	91	91.536	Octodon_degus
ENSDARG00000056517	thoc3	100	94.720	ENSONIG00000004291	thoc3	100	94.720	Oreochromis_niloticus
ENSDARG00000056517	thoc3	99	91.562	ENSOCUG00000016387	THOC3	91	91.562	Oryctolagus_cuniculus
ENSDARG00000056517	thoc3	100	95.652	ENSORLG00000030384	thoc3	92	95.652	Oryzias_latipes
ENSDARG00000056517	thoc3	100	95.652	ENSORLG00020016372	thoc3	100	95.652	Oryzias_latipes_hni
ENSDARG00000056517	thoc3	100	95.652	ENSORLG00015000336	thoc3	100	95.652	Oryzias_latipes_hsok
ENSDARG00000056517	thoc3	100	95.963	ENSOMEG00000021977	thoc3	100	95.963	Oryzias_melastigma
ENSDARG00000056517	thoc3	99	91.250	ENSOGAG00000003503	THOC3	91	91.250	Otolemur_garnettii
ENSDARG00000056517	thoc3	99	88.125	ENSOARG00000016600	THOC3	91	88.125	Ovis_aries
ENSDARG00000056517	thoc3	99	91.250	ENSPPAG00000006020	THOC3	91	91.250	Pan_paniscus
ENSDARG00000056517	thoc3	99	91.250	ENSPPRG00000020316	THOC3	91	91.250	Panthera_pardus
ENSDARG00000056517	thoc3	81	93.893	ENSPTIG00000011325	THOC3	75	93.893	Panthera_tigris_altaica
ENSDARG00000056517	thoc3	99	91.250	ENSPTRG00000017594	THOC3	91	91.250	Pan_troglodytes
ENSDARG00000056517	thoc3	99	91.250	ENSPANG00000012114	THOC3	91	91.250	Papio_anubis
ENSDARG00000056517	thoc3	100	95.652	ENSPKIG00000000208	thoc3	100	95.652	Paramormyrops_kingsleyae
ENSDARG00000056517	thoc3	100	91.304	ENSPMGG00000017949	thoc3	100	91.304	Periophthalmus_magnuspinnatus
ENSDARG00000056517	thoc3	99	91.562	ENSPEMG00000003118	Thoc3	91	91.562	Peromyscus_maniculatus_bairdii
ENSDARG00000056517	thoc3	98	84.713	ENSPMAG00000007069	thoc3	98	84.713	Petromyzon_marinus
ENSDARG00000056517	thoc3	100	95.031	ENSPFOG00000007685	thoc3	92	95.031	Poecilia_formosa
ENSDARG00000056517	thoc3	100	95.031	ENSPLAG00000003581	thoc3	98	95.031	Poecilia_latipinna
ENSDARG00000056517	thoc3	100	95.031	ENSPMEG00000005565	thoc3	98	95.031	Poecilia_mexicana
ENSDARG00000056517	thoc3	100	95.031	ENSPREG00000014916	thoc3	92	95.031	Poecilia_reticulata
ENSDARG00000056517	thoc3	99	91.250	ENSPPYG00000016066	THOC3	91	91.250	Pongo_abelii
ENSDARG00000056517	thoc3	99	91.250	ENSPCOG00000023245	THOC3	91	91.250	Propithecus_coquereli
ENSDARG00000056517	thoc3	99	90.938	ENSPVAG00000012450	THOC3	91	90.938	Pteropus_vampyrus
ENSDARG00000056517	thoc3	100	94.720	ENSPNYG00000016612	thoc3	100	94.720	Pundamilia_nyererei
ENSDARG00000056517	thoc3	100	98.447	ENSPNAG00000005252	thoc3	100	98.447	Pygocentrus_nattereri
ENSDARG00000056517	thoc3	99	91.562	ENSRNOG00000000104	Thoc3	91	91.562	Rattus_norvegicus
ENSDARG00000056517	thoc3	99	91.250	ENSRBIG00000039571	THOC3	91	91.250	Rhinopithecus_bieti
ENSDARG00000056517	thoc3	99	91.250	ENSRROG00000031032	THOC3	91	91.250	Rhinopithecus_roxellana
ENSDARG00000056517	thoc3	99	91.250	ENSSBOG00000022663	THOC3	91	91.250	Saimiri_boliviensis_boliviensis
ENSDARG00000056517	thoc3	98	91.720	ENSSHAG00000010757	THOC3	88	91.720	Sarcophilus_harrisii
ENSDARG00000056517	thoc3	99	73.270	ENSSHAG00000013075	-	91	73.270	Sarcophilus_harrisii
ENSDARG00000056517	thoc3	100	95.342	ENSSFOG00015001867	thoc3	93	95.342	Scleropages_formosus
ENSDARG00000056517	thoc3	100	95.342	ENSSMAG00000006786	thoc3	100	95.342	Scophthalmus_maximus
ENSDARG00000056517	thoc3	100	95.342	ENSSDUG00000008924	thoc3	100	95.342	Seriola_dumerili
ENSDARG00000056517	thoc3	100	95.342	ENSSLDG00000019128	thoc3	100	95.342	Seriola_lalandi_dorsalis
ENSDARG00000056517	thoc3	99	91.900	ENSSPUG00000006652	THOC3	99	91.900	Sphenodon_punctatus
ENSDARG00000056517	thoc3	100	95.652	ENSSPAG00000014229	thoc3	100	95.652	Stegastes_partitus
ENSDARG00000056517	thoc3	99	91.250	ENSSSCG00000014061	THOC3	91	91.250	Sus_scrofa
ENSDARG00000056517	thoc3	97	90.735	ENSTGUG00000000557	THOC3	99	90.735	Taeniopygia_guttata
ENSDARG00000056517	thoc3	98	94.286	ENSTRUG00000002925	thoc3	91	94.286	Takifugu_rubripes
ENSDARG00000056517	thoc3	100	93.168	ENSTNIG00000012958	thoc3	100	93.168	Tetraodon_nigroviridis
ENSDARG00000056517	thoc3	81	93.893	ENSTTRG00000014865	THOC3	100	93.893	Tursiops_truncatus
ENSDARG00000056517	thoc3	99	91.250	ENSUAMG00000010691	THOC3	91	91.250	Ursus_americanus
ENSDARG00000056517	thoc3	99	91.250	ENSUMAG00000024511	THOC3	93	91.250	Ursus_maritimus
ENSDARG00000056517	thoc3	99	86.646	ENSXETG00000022316	thoc3	99	86.646	Xenopus_tropicalis
ENSDARG00000056517	thoc3	100	95.031	ENSXCOG00000001378	thoc3	100	95.031	Xiphophorus_couchianus
ENSDARG00000056517	thoc3	100	95.031	ENSXMAG00000003232	thoc3	98	95.031	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000346	transcription export complex	-	IEA	Component
GO:0000445	THO complex part of transcription export complex	21873635.	IBA	Component
GO:0003674	molecular_function	-	ND	Function
GO:0006406	mRNA export from nucleus	21873635.	IBA	Process
GO:0006406	mRNA export from nucleus	-	IEA	Process