EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000056649 (Gene tree)
Gene ID: 394178
Gene Symbol: htatsf1
Alias: zgc:66252
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 14385 bases
Position: chr10:26652859-26667243
Accession: ZDB-GENE-040426-1578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000073630	RRM_1	PF00076.22	5.9e-18	1	2
ENSDARP00000073630	RRM_1	PF00076.22	5.9e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000079174	-	1624	-	ENSDARP00000073630	450 (aa)	-	F1QUB8

Gene Model

Click here to download ENSDARG00000056649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000056649's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000056649	htatsf1	80	59.673	ENSG00000102241	HTATSF1	100	54.043	Homo_sapiens
ENSDARG00000056649	htatsf1	100	68.653	ENSAPOG00000009823	htatsf1	100	68.433	Acanthochromis_polyacanthus
ENSDARG00000056649	htatsf1	100	66.450	ENSACIG00000020459	htatsf1	100	68.251	Amphilophus_citrinellus
ENSDARG00000056649	htatsf1	100	68.035	ENSAOCG00000020994	htatsf1	100	68.172	Amphiprion_ocellaris
ENSDARG00000056649	htatsf1	100	68.261	ENSAPEG00000016432	htatsf1	100	67.888	Amphiprion_percula
ENSDARG00000056649	htatsf1	95	69.425	ENSATEG00000008903	htatsf1	91	72.549	Anabas_testudineus
ENSDARG00000056649	htatsf1	92	61.520	ENSAPLG00000012401	HTATSF1	99	61.337	Anas_platyrhynchos
ENSDARG00000056649	htatsf1	77	65.341	ENSACAG00000009346	HTATSF1	99	59.951	Anolis_carolinensis
ENSDARG00000056649	htatsf1	100	66.522	ENSACLG00000008096	htatsf1	100	66.811	Astatotilapia_calliptera
ENSDARG00000056649	htatsf1	99	71.706	ENSAMXG00000008387	htatsf1	99	73.160	Astyanax_mexicanus
ENSDARG00000056649	htatsf1	92	55.251	ENSBTAG00000032711	HTATSF1	54	57.561	Bos_taurus
ENSDARG00000056649	htatsf1	89	59.268	ENSBTAG00000055212	HTATSF1	51	59.268	Bos_taurus
ENSDARG00000056649	htatsf1	89	59.268	ENSBTAG00000054942	HTATSF1	51	59.268	Bos_taurus
ENSDARG00000056649	htatsf1	77	38.352	WBGene00022025	Y65B4A.1	78	39.167	Caenorhabditis_elegans
ENSDARG00000056649	htatsf1	84	61.039	ENSCAFG00000023294	HTATSF1	50	61.039	Canis_familiaris
ENSDARG00000056649	htatsf1	89	59.512	ENSCHIG00000000312	HTATSF1	53	59.512	Capra_hircus
ENSDARG00000056649	htatsf1	79	59.669	ENSCCAG00000025329	-	54	60.105	Cebus_capucinus
ENSDARG00000056649	htatsf1	99	62.138	ENSCPBG00000026092	HTATSF1	98	62.138	Chrysemys_picta_bellii
ENSDARG00000056649	htatsf1	90	47.769	ENSCING00000005914	-	89	47.507	Ciona_intestinalis
ENSDARG00000056649	htatsf1	89	47.581	ENSCSAVG00000000371	-	93	47.312	Ciona_savignyi
ENSDARG00000056649	htatsf1	100	67.819	ENSCVAG00000014070	htatsf1	99	67.603	Cyprinodon_variegatus
ENSDARG00000056649	htatsf1	77	44.167	FBgn0037081	barc	65	45.082	Drosophila_melanogaster
ENSDARG00000056649	htatsf1	88	54.676	ENSEBUG00000001534	htatsf1	83	57.039	Eptatretus_burgeri
ENSDARG00000056649	htatsf1	100	64.488	ENSELUG00000005486	htatsf1	90	65.284	Esox_lucius
ENSDARG00000056649	htatsf1	99	54.428	ENSFCAG00000031924	HTATSF1	52	59.204	Felis_catus
ENSDARG00000056649	htatsf1	99	60.944	ENSFALG00000003728	HTATSF1	99	60.691	Ficedula_albicollis
ENSDARG00000056649	htatsf1	100	68.764	ENSFHEG00000020286	htatsf1	100	68.113	Fundulus_heteroclitus
ENSDARG00000056649	htatsf1	80	72.626	ENSGMOG00000016444	htatsf1	100	72.626	Gadus_morhua
ENSDARG00000056649	htatsf1	99	61.438	ENSGALG00000006410	HTATSF1	99	60.832	Gallus_gallus
ENSDARG00000056649	htatsf1	100	67.105	ENSGAFG00000003041	htatsf1	98	66.886	Gambusia_affinis
ENSDARG00000056649	htatsf1	100	68.433	ENSGACG00000020459	htatsf1	100	68.192	Gasterosteus_aculeatus
ENSDARG00000056649	htatsf1	100	67.245	ENSHBUG00000004392	htatsf1	100	67.028	Haplochromis_burtoni
ENSDARG00000056649	htatsf1	84	71.279	ENSHCOG00000009056	htatsf1	99	64.317	Hippocampus_comes
ENSDARG00000056649	htatsf1	85	77.165	ENSIPUG00000017828	htatsf1	99	69.099	Ictalurus_punctatus
ENSDARG00000056649	htatsf1	99	54.664	ENSSTOG00000012505	HTATSF1	53	60.349	Ictidomys_tridecemlineatus
ENSDARG00000056649	htatsf1	100	68.261	ENSKMAG00000007622	htatsf1	100	68.043	Kryptolebias_marmoratus
ENSDARG00000056649	htatsf1	100	67.550	ENSLBEG00000001154	htatsf1	100	67.621	Labrus_bergylta
ENSDARG00000056649	htatsf1	99	61.062	ENSLACG00000015989	HTATSF1	99	61.062	Latimeria_chalumnae
ENSDARG00000056649	htatsf1	99	48.180	ENSLOCG00000015118	htatsf1	99	47.881	Lepisosteus_oculatus
ENSDARG00000056649	htatsf1	89	59.367	ENSLAFG00000014307	HTATSF1	55	60.982	Loxodonta_africana
ENSDARG00000056649	htatsf1	80	60.484	ENSMNEG00000024084	HTATSF1	55	61.538	Macaca_nemestrina
ENSDARG00000056649	htatsf1	84	73.698	ENSMAMG00000021225	htatsf1	99	66.009	Mastacembelus_armatus
ENSDARG00000056649	htatsf1	100	66.522	ENSMZEG00005000485	htatsf1	100	66.811	Maylandia_zebra
ENSDARG00000056649	htatsf1	95	61.239	ENSMGAG00000003558	HTATSF1	99	61.060	Meleagris_gallopavo
ENSDARG00000056649	htatsf1	84	62.629	ENSMAUG00000007235	Htatsf1	50	62.629	Mesocricetus_auratus
ENSDARG00000056649	htatsf1	98	55.315	ENSMICG00000009348	HTATSF1	53	59.080	Microcebus_murinus
ENSDARG00000056649	htatsf1	80	62.670	ENSMOCG00000023007	-	50	63.636	Microtus_ochrogaster
ENSDARG00000056649	htatsf1	100	67.609	ENSMMOG00000011013	htatsf1	100	67.174	Mola_mola
ENSDARG00000056649	htatsf1	100	61.605	ENSMODG00000014087	-	98	61.656	Monodelphis_domestica
ENSDARG00000056649	htatsf1	54	60.474	ENSMODG00000000199	-	91	59.322	Monodelphis_domestica
ENSDARG00000056649	htatsf1	100	66.885	ENSMALG00000019977	htatsf1	100	66.885	Monopterus_albus
ENSDARG00000056649	htatsf1	80	60.326	MGP_CAROLIEiJ_G0033094	Htatsf1	50	61.399	Mus_caroli
ENSDARG00000056649	htatsf1	98	54.705	ENSMPUG00000001901	HTATSF1	52	58.435	Mustela_putorius_furo
ENSDARG00000056649	htatsf1	83	60.158	ENSMLUG00000009234	-	51	60.313	Myotis_lucifugus
ENSDARG00000056649	htatsf1	80	61.308	ENSNGAG00000017831	Htatsf1	51	62.338	Nannospalax_galili
ENSDARG00000056649	htatsf1	100	67.028	ENSNBRG00000003818	htatsf1	100	66.811	Neolamprologus_brichardi
ENSDARG00000056649	htatsf1	94	56.279	ENSNLEG00000002746	HTATSF1	55	56.279	Nomascus_leucogenys
ENSDARG00000056649	htatsf1	83	67.105	ENSMEUG00000004133	-	89	67.105	Notamacropus_eugenii
ENSDARG00000056649	htatsf1	100	66.811	ENSONIG00000008638	htatsf1	100	66.594	Oreochromis_niloticus
ENSDARG00000056649	htatsf1	91	60.096	ENSOANG00000011674	-	98	59.615	Ornithorhynchus_anatinus
ENSDARG00000056649	htatsf1	100	65.368	ENSORLG00000002356	htatsf1	100	65.152	Oryzias_latipes
ENSDARG00000056649	htatsf1	100	65.517	ENSORLG00020017818	htatsf1	97	66.087	Oryzias_latipes_hni
ENSDARG00000056649	htatsf1	100	65.011	ENSORLG00015002268	htatsf1	100	65.570	Oryzias_latipes_hsok
ENSDARG00000056649	htatsf1	100	67.028	ENSOMEG00000007564	htatsf1	100	66.377	Oryzias_melastigma
ENSDARG00000056649	htatsf1	97	54.667	ENSOGAG00000005565	HTATSF1	52	58.458	Otolemur_garnettii
ENSDARG00000056649	htatsf1	89	59.512	ENSOARG00000011215	-	51	59.512	Ovis_aries
ENSDARG00000056649	htatsf1	99	54.860	ENSPPRG00000014209	HTATSF1	50	60.982	Panthera_pardus
ENSDARG00000056649	htatsf1	99	65.142	ENSPKIG00000024852	htatsf1	99	65.934	Paramormyrops_kingsleyae
ENSDARG00000056649	htatsf1	76	64.888	ENSPSIG00000010192	HTATSF1	99	64.286	Pelodiscus_sinensis
ENSDARG00000056649	htatsf1	99	65.502	ENSPMGG00000006172	htatsf1	99	65.435	Periophthalmus_magnuspinnatus
ENSDARG00000056649	htatsf1	99	56.637	ENSPCIG00000018896	-	99	56.637	Phascolarctos_cinereus
ENSDARG00000056649	htatsf1	83	65.707	ENSPCIG00000030173	-	86	65.707	Phascolarctos_cinereus
ENSDARG00000056649	htatsf1	100	68.202	ENSPFOG00000007871	htatsf1	97	67.982	Poecilia_formosa
ENSDARG00000056649	htatsf1	100	68.421	ENSPLAG00000007532	htatsf1	100	68.202	Poecilia_latipinna
ENSDARG00000056649	htatsf1	100	68.421	ENSPMEG00000000352	htatsf1	100	68.202	Poecilia_mexicana
ENSDARG00000056649	htatsf1	100	68.467	ENSPREG00000007811	htatsf1	100	68.996	Poecilia_reticulata
ENSDARG00000056649	htatsf1	94	56.279	ENSPPYG00000020765	HTATSF1	55	56.279	Pongo_abelii
ENSDARG00000056649	htatsf1	86	54.177	ENSPCAG00000010576	HTATSF1	54	54.177	Procavia_capensis
ENSDARG00000056649	htatsf1	98	55.677	ENSPCOG00000021823	HTATSF1	50	61.917	Propithecus_coquereli
ENSDARG00000056649	htatsf1	96	55.333	ENSPVAG00000010281	HTATSF1	57	59.069	Pteropus_vampyrus
ENSDARG00000056649	htatsf1	100	66.522	ENSPNYG00000016693	htatsf1	100	66.811	Pundamilia_nyererei
ENSDARG00000056649	htatsf1	99	70.513	ENSPNAG00000006166	htatsf1	99	70.940	Pygocentrus_nattereri
ENSDARG00000056649	htatsf1	98	59.471	ENSSHAG00000018908	-	97	59.471	Sarcophilus_harrisii
ENSDARG00000056649	htatsf1	84	66.492	ENSSHAG00000006440	-	97	66.492	Sarcophilus_harrisii
ENSDARG00000056649	htatsf1	99	62.716	ENSSFOG00015012002	htatsf1	99	63.362	Scleropages_formosus
ENSDARG00000056649	htatsf1	100	67.686	ENSSMAG00000002970	htatsf1	100	68.490	Scophthalmus_maximus
ENSDARG00000056649	htatsf1	100	63.974	ENSSDUG00000020002	htatsf1	99	64.410	Seriola_dumerili
ENSDARG00000056649	htatsf1	100	67.544	ENSSLDG00000016880	htatsf1	100	67.982	Seriola_lalandi_dorsalis
ENSDARG00000056649	htatsf1	92	56.635	ENSSARG00000005193	HTATSF1	55	57.109	Sorex_araneus
ENSDARG00000056649	htatsf1	99	62.745	ENSSPUG00000014767	HTATSF1	98	62.582	Sphenodon_punctatus
ENSDARG00000056649	htatsf1	100	66.594	ENSSPAG00000000732	htatsf1	100	66.167	Stegastes_partitus
ENSDARG00000056649	htatsf1	80	60.598	ENSSSCG00000023062	HTATSF1	61	57.143	Sus_scrofa
ENSDARG00000056649	htatsf1	98	61.874	ENSTGUG00000002099	HTATSF1	98	61.623	Taeniopygia_guttata
ENSDARG00000056649	htatsf1	100	66.812	ENSTRUG00000013383	htatsf1	100	66.376	Takifugu_rubripes
ENSDARG00000056649	htatsf1	100	65.939	ENSTNIG00000016140	htatsf1	99	65.502	Tetraodon_nigroviridis
ENSDARG00000056649	htatsf1	76	59.659	ENSTTRG00000002269	HTATSF1	58	60.511	Tursiops_truncatus
ENSDARG00000056649	htatsf1	98	54.705	ENSUAMG00000012048	HTATSF1	52	59.250	Ursus_americanus
ENSDARG00000056649	htatsf1	98	54.705	ENSUMAG00000010393	HTATSF1	51	59.250	Ursus_maritimus
ENSDARG00000056649	htatsf1	99	58.568	ENSXETG00000019749	htatsf1	85	58.425	Xenopus_tropicalis
ENSDARG00000056649	htatsf1	96	69.053	ENSXCOG00000006912	htatsf1	96	70.546	Xiphophorus_couchianus
ENSDARG00000056649	htatsf1	100	69.316	ENSXMAG00000000490	htatsf1	100	69.536	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	-	IEA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005684	U2-type spliceosomal complex	21873635.	IBA	Component
GO:0005686	U2 snRNP	21873635.	IBA	Component