EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000056717 (Gene tree)
Gene ID: 100170827
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial (putative)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 49439 bases
Position: chr19:27399168-27448606
Accession: ZDB-GENE-060503-575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000073707	tRNA-synt_1g	PF09334.11	7.9e-16	1	1
ENSDARP00000144410	tRNA-synt_1g	PF09334.11	7.9e-16	1	1
ENSDARP00000073707	Anticodon_1	PF08264.13	2.6e-35	1	1
ENSDARP00000144410	Anticodon_1	PF08264.13	2.6e-35	1	1
ENSDARP00000073707	tRNA-synt_1	PF00133.22	7.3e-200	1	1
ENSDARP00000144410	tRNA-synt_1	PF00133.22	7.3e-200	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000079251	-	3522	-	ENSDARP00000073707	1057 (aa)	-	F1QSW0
ENSDART00000177665	-	3556	-	ENSDARP00000144410	1057 (aa)	-	F1QSW0

Gene Model

Click here to download ENSDARG00000056717's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000056717's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000056717	vars2	93	49.748	ENSDARG00000044575	vars	80	48.646

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000056717	vars2	100	69.658	ENSAPOG00000007396	vars2	99	69.750	Acanthochromis_polyacanthus
ENSDARG00000056717	vars2	97	52.224	ENSAMEG00000012997	VARS2	93	52.224	Ailuropoda_melanoleuca
ENSDARG00000056717	vars2	99	69.925	ENSACIG00000004344	vars2	99	69.925	Amphilophus_citrinellus
ENSDARG00000056717	vars2	100	68.426	ENSAOCG00000000476	vars2	99	68.611	Amphiprion_ocellaris
ENSDARG00000056717	vars2	100	68.426	ENSAPEG00000008646	vars2	97	68.611	Amphiprion_percula
ENSDARG00000056717	vars2	96	73.133	ENSATEG00000012291	vars2	99	71.872	Anabas_testudineus
ENSDARG00000056717	vars2	99	53.214	ENSACAG00000022093	VARS2	97	53.214	Anolis_carolinensis
ENSDARG00000056717	vars2	98	51.229	ENSANAG00000038018	VARS2	98	51.229	Aotus_nancymaae
ENSDARG00000056717	vars2	98	70.349	ENSACLG00000018673	vars2	99	70.349	Astatotilapia_calliptera
ENSDARG00000056717	vars2	97	75.673	ENSAMXG00000017773	vars2	97	75.678	Astyanax_mexicanus
ENSDARG00000056717	vars2	97	51.201	ENSBTAG00000010698	VARS2	96	51.201	Bos_taurus
ENSDARG00000056717	vars2	96	51.591	ENSCJAG00000019826	VARS2	96	51.585	Callithrix_jacchus
ENSDARG00000056717	vars2	96	52.810	ENSCAFG00000000454	VARS2	95	52.810	Canis_familiaris
ENSDARG00000056717	vars2	84	57.620	ENSCAFG00020019387	VARS2	91	57.539	Canis_lupus_dingo
ENSDARG00000056717	vars2	99	50.894	ENSCHIG00000007847	VARS2	98	50.988	Capra_hircus
ENSDARG00000056717	vars2	96	52.687	ENSTSYG00000009904	VARS2	96	52.687	Carlito_syrichta
ENSDARG00000056717	vars2	88	53.640	ENSCAPG00000017770	VARS2	99	53.640	Cavia_aperea
ENSDARG00000056717	vars2	97	51.582	ENSCPOG00000021834	VARS2	96	51.678	Cavia_porcellus
ENSDARG00000056717	vars2	96	51.884	ENSCCAG00000037907	VARS2	96	51.877	Cebus_capucinus
ENSDARG00000056717	vars2	97	52.057	ENSCATG00000032554	VARS2	96	52.050	Cercocebus_atys
ENSDARG00000056717	vars2	94	52.221	ENSCLAG00000002889	VARS2	94	52.221	Chinchilla_lanigera
ENSDARG00000056717	vars2	97	52.440	ENSCSAG00000008327	VARS2	96	52.431	Chlorocebus_sabaeus
ENSDARG00000056717	vars2	92	55.975	ENSCPBG00000021502	VARS2	96	55.975	Chrysemys_picta_bellii
ENSDARG00000056717	vars2	97	51.579	ENSCANG00000014991	VARS2	95	51.573	Colobus_angolensis_palliatus
ENSDARG00000056717	vars2	97	52.500	ENSCGRG00001021535	Vars2	98	52.166	Cricetulus_griseus_chok1gshd
ENSDARG00000056717	vars2	97	52.500	ENSCGRG00000014112	Vars2	98	52.166	Cricetulus_griseus_crigri
ENSDARG00000056717	vars2	87	72.664	ENSCSEG00000015432	vars2	95	72.664	Cynoglossus_semilaevis
ENSDARG00000056717	vars2	66	71.124	ENSCVAG00000017765	vars2	97	71.124	Cyprinodon_variegatus
ENSDARG00000056717	vars2	80	52.453	ENSDORG00000008516	Vars2	93	52.453	Dipodomys_ordii
ENSDARG00000056717	vars2	97	45.472	ENSETEG00000014844	VARS2	97	45.472	Echinops_telfairi
ENSDARG00000056717	vars2	99	49.764	ENSEASG00005019997	VARS2	96	55.828	Equus_asinus_asinus
ENSDARG00000056717	vars2	96	52.372	ENSECAG00000018202	VARS2	98	51.643	Equus_caballus
ENSDARG00000056717	vars2	64	55.340	ENSEEUG00000012591	-	63	55.340	Erinaceus_europaeus
ENSDARG00000056717	vars2	100	71.009	ENSELUG00000017824	vars2	99	71.009	Esox_lucius
ENSDARG00000056717	vars2	96	52.450	ENSFCAG00000010531	VARS2	96	52.450	Felis_catus
ENSDARG00000056717	vars2	98	52.133	ENSFDAG00000017216	VARS2	98	52.133	Fukomys_damarensis
ENSDARG00000056717	vars2	93	65.196	ENSFHEG00000013932	vars2	98	65.196	Fundulus_heteroclitus
ENSDARG00000056717	vars2	91	68.351	ENSGMOG00000018960	vars2	100	68.351	Gadus_morhua
ENSDARG00000056717	vars2	93	66.424	ENSGAFG00000004737	vars2	100	66.424	Gambusia_affinis
ENSDARG00000056717	vars2	94	68.800	ENSGACG00000001464	vars2	99	68.800	Gasterosteus_aculeatus
ENSDARG00000056717	vars2	92	55.771	ENSGAGG00000011652	VARS2	98	55.771	Gopherus_agassizii
ENSDARG00000056717	vars2	99	50.938	ENSGGOG00000014587	VARS2	98	50.698	Gorilla_gorilla
ENSDARG00000056717	vars2	98	68.091	ENSHBUG00000002448	vars2	99	68.091	Haplochromis_burtoni
ENSDARG00000056717	vars2	95	52.212	ENSHGLG00000012886	VARS2	91	52.212	Heterocephalus_glaber_female
ENSDARG00000056717	vars2	95	52.016	ENSHGLG00100016535	VARS2	95	52.114	Heterocephalus_glaber_male
ENSDARG00000056717	vars2	70	68.598	ENSHCOG00000017907	vars2	99	68.598	Hippocampus_comes
ENSDARG00000056717	vars2	99	75.047	ENSIPUG00000015573	Vars2	98	75.047	Ictalurus_punctatus
ENSDARG00000056717	vars2	97	51.973	ENSSTOG00000009924	VARS2	96	52.069	Ictidomys_tridecemlineatus
ENSDARG00000056717	vars2	96	51.969	ENSJJAG00000011144	Vars2	96	52.065	Jaculus_jaculus
ENSDARG00000056717	vars2	100	67.373	ENSKMAG00000001393	vars2	99	67.558	Kryptolebias_marmoratus
ENSDARG00000056717	vars2	53	80.322	ENSLBEG00000005480	-	81	80.692	Labrus_bergylta
ENSDARG00000056717	vars2	100	66.728	ENSLBEG00000011949	vars2	99	66.914	Labrus_bergylta
ENSDARG00000056717	vars2	96	52.697	ENSLACG00000001576	-	99	52.885	Latimeria_chalumnae
ENSDARG00000056717	vars2	99	51.130	ENSLAFG00000015183	VARS2	99	51.130	Loxodonta_africana
ENSDARG00000056717	vars2	97	51.969	ENSMFAG00000042367	VARS2	96	51.962	Macaca_fascicularis
ENSDARG00000056717	vars2	97	52.065	ENSMMUG00000018609	VARS2	96	52.057	Macaca_mulatta
ENSDARG00000056717	vars2	97	51.969	ENSMNEG00000043163	VARS2	96	51.962	Macaca_nemestrina
ENSDARG00000056717	vars2	97	52.153	ENSMLEG00000041728	VARS2	93	52.145	Mandrillus_leucophaeus
ENSDARG00000056717	vars2	97	69.075	ENSMAMG00000020339	vars2	98	68.466	Mastacembelus_armatus
ENSDARG00000056717	vars2	98	70.255	ENSMZEG00005017669	vars2	99	70.255	Maylandia_zebra
ENSDARG00000056717	vars2	97	52.303	ENSMAUG00000018946	Vars2	96	52.303	Mesocricetus_auratus
ENSDARG00000056717	vars2	83	55.617	ENSMICG00000005365	VARS2	99	55.617	Microcebus_murinus
ENSDARG00000056717	vars2	90	58.521	ENSMOCG00000014607	Vars2	96	58.521	Microtus_ochrogaster
ENSDARG00000056717	vars2	99	68.015	ENSMMOG00000012122	vars2	99	68.109	Mola_mola
ENSDARG00000056717	vars2	94	52.673	ENSMODG00000015848	VARS2	95	51.284	Monodelphis_domestica
ENSDARG00000056717	vars2	94	70.846	ENSMALG00000009217	vars2	99	70.846	Monopterus_albus
ENSDARG00000056717	vars2	97	52.207	MGP_CAROLIEiJ_G0021529	Vars2	88	66.327	Mus_caroli
ENSDARG00000056717	vars2	97	52.111	ENSMUSG00000038838	Vars2	88	65.306	Mus_musculus
ENSDARG00000056717	vars2	97	52.203	MGP_PahariEiJ_G0020523	Vars2	88	65.306	Mus_pahari
ENSDARG00000056717	vars2	97	52.015	MGP_SPRETEiJ_G0022436	Vars2	88	66.327	Mus_spretus
ENSDARG00000056717	vars2	97	52.413	ENSMPUG00000011643	VARS2	96	52.413	Mustela_putorius_furo
ENSDARG00000056717	vars2	96	51.996	ENSMLUG00000002356	VARS2	92	52.093	Myotis_lucifugus
ENSDARG00000056717	vars2	98	47.293	ENSNGAG00000020607	Vars2	98	47.081	Nannospalax_galili
ENSDARG00000056717	vars2	72	64.088	ENSNBRG00000001624	vars2	61	64.088	Neolamprologus_brichardi
ENSDARG00000056717	vars2	94	51.921	ENSNLEG00000005625	VARS2	92	51.914	Nomascus_leucogenys
ENSDARG00000056717	vars2	76	57.191	ENSMEUG00000014475	VARS2	85	57.191	Notamacropus_eugenii
ENSDARG00000056717	vars2	88	48.259	ENSOPRG00000000682	VARS2	87	48.259	Ochotona_princeps
ENSDARG00000056717	vars2	96	51.262	ENSODEG00000017965	VARS2	95	51.359	Octodon_degus
ENSDARG00000056717	vars2	94	52.981	ENSONIG00000004734	vars2	100	52.981	Oreochromis_niloticus
ENSDARG00000056717	vars2	67	47.978	ENSOANG00000000398	-	86	47.978	Ornithorhynchus_anatinus
ENSDARG00000056717	vars2	99	47.770	ENSOCUG00000021496	VARS2	63	48.048	Oryctolagus_cuniculus
ENSDARG00000056717	vars2	94	67.493	ENSORLG00000010632	vars2	99	64.733	Oryzias_latipes
ENSDARG00000056717	vars2	94	67.790	ENSORLG00020018584	vars2	96	66.412	Oryzias_latipes_hni
ENSDARG00000056717	vars2	94	67.790	ENSORLG00015010408	vars2	99	64.917	Oryzias_latipes_hsok
ENSDARG00000056717	vars2	94	67.294	ENSOMEG00000008360	vars2	96	65.807	Oryzias_melastigma
ENSDARG00000056717	vars2	96	51.774	ENSOGAG00000006087	VARS2	93	51.774	Otolemur_garnettii
ENSDARG00000056717	vars2	95	51.270	ENSOARG00000010844	VARS2	93	51.270	Ovis_aries
ENSDARG00000056717	vars2	97	51.675	ENSPPAG00000041141	VARS2	96	51.675	Pan_paniscus
ENSDARG00000056717	vars2	98	52.091	ENSPPRG00000006751	VARS2	95	52.091	Panthera_pardus
ENSDARG00000056717	vars2	96	52.450	ENSPTIG00000017799	VARS2	96	53.568	Panthera_tigris_altaica
ENSDARG00000056717	vars2	97	51.675	ENSPTRG00000034497	VARS2	96	51.675	Pan_troglodytes
ENSDARG00000056717	vars2	97	52.153	ENSPANG00000018481	VARS2	96	53.582	Papio_anubis
ENSDARG00000056717	vars2	100	69.581	ENSPKIG00000011372	vars2	99	69.674	Paramormyrops_kingsleyae
ENSDARG00000056717	vars2	60	62.677	ENSPSIG00000006206	VARS2	92	62.346	Pelodiscus_sinensis
ENSDARG00000056717	vars2	99	69.347	ENSPMGG00000000465	vars2	98	69.347	Periophthalmus_magnuspinnatus
ENSDARG00000056717	vars2	97	52.879	ENSPEMG00000014691	Vars2	96	52.879	Peromyscus_maniculatus_bairdii
ENSDARG00000056717	vars2	96	53.372	ENSPCIG00000015040	VARS2	92	54.536	Phascolarctos_cinereus
ENSDARG00000056717	vars2	95	67.688	ENSPFOG00000017616	vars2	96	67.085	Poecilia_formosa
ENSDARG00000056717	vars2	95	67.586	ENSPLAG00000019778	vars2	99	65.517	Poecilia_latipinna
ENSDARG00000056717	vars2	100	65.520	ENSPMEG00000011123	vars2	99	65.520	Poecilia_mexicana
ENSDARG00000056717	vars2	97	60.286	ENSPREG00000014998	vars2	99	60.286	Poecilia_reticulata
ENSDARG00000056717	vars2	97	51.530	ENSPPYG00000016424	VARS2	96	51.524	Pongo_abelii
ENSDARG00000056717	vars2	80	55.426	ENSPCAG00000006946	VARS2	80	55.426	Procavia_capensis
ENSDARG00000056717	vars2	99	50.514	ENSPCOG00000014839	VARS2	95	50.514	Propithecus_coquereli
ENSDARG00000056717	vars2	96	52.051	ENSPVAG00000004197	VARS2	95	52.051	Pteropus_vampyrus
ENSDARG00000056717	vars2	84	77.898	ENSPNYG00000010314	vars2	100	77.898	Pundamilia_nyererei
ENSDARG00000056717	vars2	100	74.815	ENSPNAG00000026793	vars2	99	74.908	Pygocentrus_nattereri
ENSDARG00000056717	vars2	98	52.050	ENSRNOG00000000833	Vars2	97	52.050	Rattus_norvegicus
ENSDARG00000056717	vars2	97	52.057	ENSRBIG00000032725	VARS2	96	52.050	Rhinopithecus_bieti
ENSDARG00000056717	vars2	97	51.962	ENSRROG00000043847	VARS2	96	51.954	Rhinopithecus_roxellana
ENSDARG00000056717	vars2	97	50.703	ENSSBOG00000033240	VARS2	94	50.797	Saimiri_boliviensis_boliviensis
ENSDARG00000056717	vars2	96	53.320	ENSSHAG00000009307	VARS2	95	53.320	Sarcophilus_harrisii
ENSDARG00000056717	vars2	96	71.498	ENSSFOG00015016187	vars2	95	71.498	Scleropages_formosus
ENSDARG00000056717	vars2	99	69.418	ENSSMAG00000020842	vars2	99	70.629	Scophthalmus_maximus
ENSDARG00000056717	vars2	100	70.260	ENSSDUG00000011598	vars2	99	70.353	Seriola_dumerili
ENSDARG00000056717	vars2	100	69.663	ENSSLDG00000015492	vars2	99	69.757	Seriola_lalandi_dorsalis
ENSDARG00000056717	vars2	80	61.675	ENSSPUG00000014700	VARS2	88	61.675	Sphenodon_punctatus
ENSDARG00000056717	vars2	100	66.698	ENSSPAG00000004654	vars2	100	65.920	Stegastes_partitus
ENSDARG00000056717	vars2	97	52.586	ENSSSCG00000001384	VARS2	95	55.348	Sus_scrofa
ENSDARG00000056717	vars2	94	69.809	ENSTRUG00000005264	vars2	99	67.885	Takifugu_rubripes
ENSDARG00000056717	vars2	97	67.119	ENSTNIG00000005916	vars2	97	66.476	Tetraodon_nigroviridis
ENSDARG00000056717	vars2	91	47.959	ENSTTRG00000012243	VARS2	89	47.959	Tursiops_truncatus
ENSDARG00000056717	vars2	97	52.170	ENSUAMG00000026124	VARS2	99	54.153	Ursus_americanus
ENSDARG00000056717	vars2	97	52.413	ENSUMAG00000019894	VARS2	96	52.413	Ursus_maritimus
ENSDARG00000056717	vars2	97	52.157	ENSVVUG00000010754	VARS2	91	52.157	Vulpes_vulpes
ENSDARG00000056717	vars2	84	54.928	ENSXETG00000003036	vars2	93	54.928	Xenopus_tropicalis
ENSDARG00000056717	vars2	97	67.788	ENSXCOG00000003455	vars2	99	67.788	Xiphophorus_couchianus
ENSDARG00000056717	vars2	100	66.574	ENSXMAG00000013523	vars2	99	66.574	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0002161	aminoacyl-tRNA editing activity	-	IEA	Function
GO:0004812	aminoacyl-tRNA ligase activity	-	IEA	Function
GO:0004832	valine-tRNA ligase activity	21873635.	IBA	Function
GO:0004832	valine-tRNA ligase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006412	translation	-	IEA	Process
GO:0006418	tRNA aminoacylation for protein translation	-	IEA	Process
GO:0006438	valyl-tRNA aminoacylation	21873635.	IBA	Process
GO:0006438	valyl-tRNA aminoacylation	-	IEA	Process
GO:0016874	ligase activity	-	IEA	Function