EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000056720 (Gene tree)
Gene ID: 447856
Gene Symbol: utp3
Alias: zgc:92127
Full Name: UTP3%2C small subunit (SSU) processome component%2C homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 5195 bases
Position: chr11:26370381-26375575
Accession: ZDB-GENE-040912-163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000073711	Sas10_Utp3	PF04000.15	4.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000139988	-	723	-	-	- (aa)	-	-
ENSDART00000079255	-	1972	-	ENSDARP00000073711	470 (aa)	-	Q66I02

Gene Model

Click here to download ENSDARG00000056720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000056720's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000056720	utp3	93	50.110	ENSG00000132467	UTP3	93	49.011	Homo_sapiens
ENSDARG00000056720	utp3	100	68.607	ENSAPOG00000018006	utp3	100	68.465	Acanthochromis_polyacanthus
ENSDARG00000056720	utp3	93	51.220	ENSAMEG00000019540	UTP3	93	51.441	Ailuropoda_melanoleuca
ENSDARG00000056720	utp3	100	62.420	ENSACIG00000010913	utp3	99	63.090	Amphilophus_citrinellus
ENSDARG00000056720	utp3	100	67.149	ENSAOCG00000016134	utp3	100	66.736	Amphiprion_ocellaris
ENSDARG00000056720	utp3	100	66.322	ENSAPEG00000003914	utp3	100	66.116	Amphiprion_percula
ENSDARG00000056720	utp3	100	64.449	ENSATEG00000024940	utp3	100	64.669	Anabas_testudineus
ENSDARG00000056720	utp3	77	52.987	ENSACAG00000012860	UTP3	99	49.290	Anolis_carolinensis
ENSDARG00000056720	utp3	93	48.559	ENSANAG00000031723	UTP3	93	50.330	Aotus_nancymaae
ENSDARG00000056720	utp3	100	66.597	ENSACLG00000015170	utp3	100	67.015	Astatotilapia_calliptera
ENSDARG00000056720	utp3	84	70.516	ENSAMXG00000032941	utp3	93	71.958	Astyanax_mexicanus
ENSDARG00000056720	utp3	99	47.500	ENSBTAG00000009310	UTP3	99	48.340	Bos_taurus
ENSDARG00000056720	utp3	93	47.186	ENSCJAG00000042824	UTP3	93	48.690	Callithrix_jacchus
ENSDARG00000056720	utp3	93	50.552	ENSCAFG00000002913	UTP3	93	51.441	Canis_familiaris
ENSDARG00000056720	utp3	93	50.113	ENSCAFG00020027071	UTP3	92	49.210	Canis_lupus_dingo
ENSDARG00000056720	utp3	99	47.292	ENSCHIG00000002276	UTP3	99	48.133	Capra_hircus
ENSDARG00000056720	utp3	93	52.902	ENSCPOG00000005869	UTP3	93	52.000	Cavia_porcellus
ENSDARG00000056720	utp3	93	48.899	ENSCCAG00000032341	UTP3	93	49.780	Cebus_capucinus
ENSDARG00000056720	utp3	93	50.661	ENSCATG00000016403	UTP3	93	49.559	Cercocebus_atys
ENSDARG00000056720	utp3	93	50.000	ENSCLAG00000017606	UTP3	93	48.998	Chinchilla_lanigera
ENSDARG00000056720	utp3	93	49.672	ENSCSAG00000000420	UTP3	93	49.891	Chlorocebus_sabaeus
ENSDARG00000056720	utp3	77	55.784	ENSCPBG00000019489	UTP3	94	52.778	Chrysemys_picta_bellii
ENSDARG00000056720	utp3	93	37.908	ENSCING00000007582	-	94	39.046	Ciona_intestinalis
ENSDARG00000056720	utp3	93	37.892	ENSCSAVG00000010608	-	94	36.404	Ciona_savignyi
ENSDARG00000056720	utp3	93	49.123	ENSCANG00000016915	UTP3	93	48.904	Colobus_angolensis_palliatus
ENSDARG00000056720	utp3	93	50.223	ENSCGRG00001001299	Utp3	93	52.106	Cricetulus_griseus_chok1gshd
ENSDARG00000056720	utp3	93	51.670	ENSCGRG00000019120	Utp3	93	52.106	Cricetulus_griseus_crigri
ENSDARG00000056720	utp3	84	55.051	ENSCSEG00000021698	utp3	92	55.172	Cynoglossus_semilaevis
ENSDARG00000056720	utp3	100	63.103	ENSCVAG00000011971	utp3	100	61.943	Cyprinodon_variegatus
ENSDARG00000056720	utp3	92	49.217	ENSDNOG00000002962	UTP3	91	48.533	Dasypus_novemcinctus
ENSDARG00000056720	utp3	93	50.780	ENSDORG00000023913	Utp3	93	51.096	Dipodomys_ordii
ENSDARG00000056720	utp3	77	38.482	FBgn0029755	Sas10	84	38.360	Drosophila_melanogaster
ENSDARG00000056720	utp3	99	39.669	ENSEBUG00000015686	utp3	99	38.797	Eptatretus_burgeri
ENSDARG00000056720	utp3	93	49.779	ENSEASG00005016702	UTP3	93	48.894	Equus_asinus_asinus
ENSDARG00000056720	utp3	93	50.221	ENSECAG00000005387	UTP3	93	48.894	Equus_caballus
ENSDARG00000056720	utp3	100	64.167	ENSELUG00000001527	utp3	100	64.167	Esox_lucius
ENSDARG00000056720	utp3	93	49.561	ENSFCAG00000007268	UTP3	93	50.658	Felis_catus
ENSDARG00000056720	utp3	79	52.273	ENSFALG00000014560	UTP3	97	49.160	Ficedula_albicollis
ENSDARG00000056720	utp3	95	64.565	ENSFHEG00000018565	utp3	87	64.588	Fundulus_heteroclitus
ENSDARG00000056720	utp3	84	64.912	ENSGMOG00000001824	utp3	93	66.396	Gadus_morhua
ENSDARG00000056720	utp3	77	54.922	ENSGALG00000047103	UTP3	72	52.332	Gallus_gallus
ENSDARG00000056720	utp3	100	63.071	ENSGAFG00000012330	utp3	100	63.485	Gambusia_affinis
ENSDARG00000056720	utp3	76	69.061	ENSGACG00000007417	utp3	91	68.817	Gasterosteus_aculeatus
ENSDARG00000056720	utp3	93	51.828	ENSGAGG00000003975	UTP3	92	51.820	Gopherus_agassizii
ENSDARG00000056720	utp3	93	50.220	ENSGGOG00000025335	UTP3	93	49.119	Gorilla_gorilla
ENSDARG00000056720	utp3	100	66.597	ENSHBUG00000003276	utp3	100	67.015	Haplochromis_burtoni
ENSDARG00000056720	utp3	93	49.441	ENSHGLG00000020163	UTP3	93	50.000	Heterocephalus_glaber_female
ENSDARG00000056720	utp3	93	49.441	ENSHGLG00100020125	UTP3	93	50.000	Heterocephalus_glaber_male
ENSDARG00000056720	utp3	92	60.091	ENSHCOG00000020540	utp3	97	57.623	Hippocampus_comes
ENSDARG00000056720	utp3	100	66.318	ENSIPUG00000014510	Utp3	100	66.946	Ictalurus_punctatus
ENSDARG00000056720	utp3	95	49.891	ENSSTOG00000029126	UTP3	95	50.433	Ictidomys_tridecemlineatus
ENSDARG00000056720	utp3	92	51.936	ENSJJAG00000014891	Utp3	99	49.160	Jaculus_jaculus
ENSDARG00000056720	utp3	100	66.942	ENSKMAG00000004879	utp3	100	65.638	Kryptolebias_marmoratus
ENSDARG00000056720	utp3	100	66.598	ENSLBEG00000024055	utp3	100	66.874	Labrus_bergylta
ENSDARG00000056720	utp3	100	56.855	ENSLACG00000009975	utp3	100	55.242	Latimeria_chalumnae
ENSDARG00000056720	utp3	82	64.987	ENSLOCG00000001449	utp3	100	65.027	Lepisosteus_oculatus
ENSDARG00000056720	utp3	99	46.105	ENSLAFG00000017017	UTP3	99	45.929	Loxodonta_africana
ENSDARG00000056720	utp3	93	50.441	ENSMFAG00000013579	UTP3	93	49.339	Macaca_fascicularis
ENSDARG00000056720	utp3	93	50.220	ENSMMUG00000014229	UTP3	93	49.119	Macaca_mulatta
ENSDARG00000056720	utp3	93	50.441	ENSMNEG00000005112	UTP3	93	49.339	Macaca_nemestrina
ENSDARG00000056720	utp3	93	50.441	ENSMLEG00000022236	UTP3	93	49.339	Mandrillus_leucophaeus
ENSDARG00000056720	utp3	100	65.489	ENSMAMG00000015467	utp3	100	65.073	Mastacembelus_armatus
ENSDARG00000056720	utp3	100	66.597	ENSMZEG00005014455	utp3	100	67.015	Maylandia_zebra
ENSDARG00000056720	utp3	58	51.370	ENSMGAG00000009998	UTP3	88	46.045	Meleagris_gallopavo
ENSDARG00000056720	utp3	93	50.336	ENSMAUG00000017935	Utp3	93	50.221	Mesocricetus_auratus
ENSDARG00000056720	utp3	93	52.796	ENSMOCG00000005434	Utp3	93	53.020	Microtus_ochrogaster
ENSDARG00000056720	utp3	98	62.851	ENSMMOG00000010804	utp3	98	61.555	Mola_mola
ENSDARG00000056720	utp3	93	48.253	ENSMODG00000019084	UTP3	96	50.327	Monodelphis_domestica
ENSDARG00000056720	utp3	99	63.900	ENSMALG00000003443	utp3	99	64.108	Monopterus_albus
ENSDARG00000056720	utp3	93	51.454	MGP_CAROLIEiJ_G0027375	Utp3	93	51.007	Mus_caroli
ENSDARG00000056720	utp3	93	51.011	ENSMUSG00000070697	Utp3	93	50.562	Mus_musculus
ENSDARG00000056720	utp3	62	50.338	MGP_PahariEiJ_G0017153	-	62	50.676	Mus_pahari
ENSDARG00000056720	utp3	93	51.011	MGP_SPRETEiJ_G0028372	Utp3	93	50.562	Mus_spretus
ENSDARG00000056720	utp3	99	49.896	ENSMPUG00000019074	UTP3	97	49.174	Mustela_putorius_furo
ENSDARG00000056720	utp3	93	50.780	ENSMLUG00000003722	UTP3	93	51.885	Myotis_lucifugus
ENSDARG00000056720	utp3	93	52.360	ENSNGAG00000012521	Utp3	92	51.345	Nannospalax_galili
ENSDARG00000056720	utp3	100	66.597	ENSNBRG00000020374	utp3	100	67.015	Neolamprologus_brichardi
ENSDARG00000056720	utp3	93	50.220	ENSNLEG00000018563	UTP3	93	50.220	Nomascus_leucogenys
ENSDARG00000056720	utp3	93	50.670	ENSODEG00000018723	UTP3	92	49.330	Octodon_degus
ENSDARG00000056720	utp3	100	66.528	ENSONIG00000003918	utp3	100	65.904	Oreochromis_niloticus
ENSDARG00000056720	utp3	93	50.299	ENSOANG00000013694	-	98	82.432	Ornithorhynchus_anatinus
ENSDARG00000056720	utp3	93	46.309	ENSOCUG00000010003	UTP3	92	46.889	Oryctolagus_cuniculus
ENSDARG00000056720	utp3	100	61.475	ENSORLG00000004019	utp3	100	62.033	Oryzias_latipes
ENSDARG00000056720	utp3	100	63.125	ENSORLG00020020306	utp3	100	62.500	Oryzias_latipes_hni
ENSDARG00000056720	utp3	100	61.475	ENSORLG00015016052	utp3	100	63.278	Oryzias_latipes_hsok
ENSDARG00000056720	utp3	100	63.071	ENSOMEG00000022073	utp3	100	63.147	Oryzias_melastigma
ENSDARG00000056720	utp3	93	47.357	ENSOGAG00000012878	UTP3	93	48.458	Otolemur_garnettii
ENSDARG00000056720	utp3	99	47.500	ENSOARG00000007800	UTP3	99	48.340	Ovis_aries
ENSDARG00000056720	utp3	93	50.110	ENSPPAG00000019684	UTP3	93	49.011	Pan_paniscus
ENSDARG00000056720	utp3	93	50.889	ENSPPRG00000015468	UTP3	93	51.106	Panthera_pardus
ENSDARG00000056720	utp3	93	50.667	ENSPTIG00000006703	UTP3	93	51.106	Panthera_tigris_altaica
ENSDARG00000056720	utp3	93	50.661	ENSPANG00000008263	UTP3	93	49.339	Papio_anubis
ENSDARG00000056720	utp3	99	63.713	ENSPKIG00000012883	utp3	100	63.180	Paramormyrops_kingsleyae
ENSDARG00000056720	utp3	77	54.780	ENSPSIG00000000105	UTP3	62	52.250	Pelodiscus_sinensis
ENSDARG00000056720	utp3	97	61.555	ENSPMGG00000023527	utp3	99	61.771	Periophthalmus_magnuspinnatus
ENSDARG00000056720	utp3	94	52.328	ENSPEMG00000019223	Utp3	93	52.772	Peromyscus_maniculatus_bairdii
ENSDARG00000056720	utp3	100	62.786	ENSPFOG00000014528	utp3	100	62.190	Poecilia_formosa
ENSDARG00000056720	utp3	100	62.733	ENSPLAG00000005600	utp3	100	62.757	Poecilia_latipinna
ENSDARG00000056720	utp3	100	63.843	ENSPMEG00000019359	utp3	100	63.223	Poecilia_mexicana
ENSDARG00000056720	utp3	100	62.810	ENSPREG00000005341	utp3	100	61.364	Poecilia_reticulata
ENSDARG00000056720	utp3	93	50.549	ENSPPYG00000014810	UTP3	93	49.670	Pongo_abelii
ENSDARG00000056720	utp3	99	47.817	ENSPCAG00000012879	UTP3	99	47.521	Procavia_capensis
ENSDARG00000056720	utp3	93	51.214	ENSPVAG00000004333	UTP3	93	50.330	Pteropus_vampyrus
ENSDARG00000056720	utp3	98	63.834	ENSPNYG00000017771	utp3	97	64.052	Pundamilia_nyererei
ENSDARG00000056720	utp3	100	70.478	ENSPNAG00000000182	utp3	100	70.478	Pygocentrus_nattereri
ENSDARG00000056720	utp3	93	50.559	ENSRNOG00000003599	Utp3	93	52.018	Rattus_norvegicus
ENSDARG00000056720	utp3	93	50.881	ENSRBIG00000030025	UTP3	93	49.559	Rhinopithecus_bieti
ENSDARG00000056720	utp3	93	50.881	ENSRROG00000006709	UTP3	93	49.559	Rhinopithecus_roxellana
ENSDARG00000056720	utp3	93	48.115	ENSSBOG00000019914	UTP3	93	49.890	Saimiri_boliviensis_boliviensis
ENSDARG00000056720	utp3	92	52.018	ENSSHAG00000018226	UTP3	99	49.592	Sarcophilus_harrisii
ENSDARG00000056720	utp3	100	62.395	ENSSFOG00015007775	utp3	100	62.185	Scleropages_formosus
ENSDARG00000056720	utp3	100	66.667	ENSSMAG00000015156	utp3	100	66.667	Scophthalmus_maximus
ENSDARG00000056720	utp3	100	66.186	ENSSDUG00000014843	utp3	100	66.804	Seriola_dumerili
ENSDARG00000056720	utp3	77	50.636	ENSSPUG00000007404	UTP3	78	50.769	Sphenodon_punctatus
ENSDARG00000056720	utp3	100	68.542	ENSSPAG00000007106	utp3	100	68.125	Stegastes_partitus
ENSDARG00000056720	utp3	94	50.221	ENSSSCG00000028466	UTP3	93	50.442	Sus_scrofa
ENSDARG00000056720	utp3	100	63.425	ENSTRUG00000014591	utp3	100	63.214	Takifugu_rubripes
ENSDARG00000056720	utp3	100	61.474	ENSTNIG00000014783	utp3	97	66.304	Tetraodon_nigroviridis
ENSDARG00000056720	utp3	94	50.667	ENSTTRG00000008390	UTP3	93	48.889	Tursiops_truncatus
ENSDARG00000056720	utp3	93	51.220	ENSUAMG00000008914	UTP3	93	50.773	Ursus_americanus
ENSDARG00000056720	utp3	93	50.554	ENSUMAG00000003743	UTP3	93	50.773	Ursus_maritimus
ENSDARG00000056720	utp3	72	45.299	ENSVVUG00000004285	UTP3	71	50.671	Vulpes_vulpes
ENSDARG00000056720	utp3	93	56.404	ENSXETG00000026859	utp3	93	56.180	Xenopus_tropicalis
ENSDARG00000056720	utp3	100	62.422	ENSXMAG00000017071	utp3	100	61.203	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0003674	molecular_function	-	ND	Function
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0032040	small-subunit processome	21873635.	IBA	Component