EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000056830 (Gene tree)
Gene ID: 569278
Gene Symbol: si:ch211-107m4.1
Alias: -
Full Name: si:ch211-107m4.1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 13772 bases
Position: chr14:22481833-22495604
Accession: ZDB-GENE-081107-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000119095	SAP	PF02037.27	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000137167	-	2793	XM_692655	ENSDARP00000119095	716 (aa)	XP_697747	E9QBM3
ENSDART00000174162	-	651	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000056830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000056830's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000056830	si:ch211-107m4.1	88	38.521	ENSDARG00000040564	hnrnpul1	86	36.327
ENSDARG00000056830	si:ch211-107m4.1	60	41.190	ENSDARG00000015206	hnrnpua	57	40.503
ENSDARG00000056830	si:ch211-107m4.1	60	42.825	ENSDARG00000004735	hnrnpub	78	35.082
ENSDARG00000056830	si:ch211-107m4.1	92	37.703	ENSDARG00000079780	hnrnpul1l	85	36.475

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000056830	si:ch211-107m4.1	70	43.511	ENSG00000214753	HNRNPUL2	94	38.618	Homo_sapiens
ENSDARG00000056830	si:ch211-107m4.1	89	43.192	ENSAPOG00000005128	si:ch211-107m4.1	100	41.549	Acanthochromis_polyacanthus
ENSDARG00000056830	si:ch211-107m4.1	91	42.857	ENSACIG00000022729	si:ch211-107m4.1	85	42.857	Amphilophus_citrinellus
ENSDARG00000056830	si:ch211-107m4.1	88	43.307	ENSAOCG00000017297	si:ch211-107m4.1	86	43.465	Amphiprion_ocellaris
ENSDARG00000056830	si:ch211-107m4.1	88	41.509	ENSAPEG00000009122	-	87	41.667	Amphiprion_percula
ENSDARG00000056830	si:ch211-107m4.1	66	61.538	ENSACAG00000000746	-	90	36.061	Anolis_carolinensis
ENSDARG00000056830	si:ch211-107m4.1	70	43.893	ENSANAG00000027153	-	94	38.784	Aotus_nancymaae
ENSDARG00000056830	si:ch211-107m4.1	96	44.907	ENSACLG00000018069	si:ch211-107m4.1	99	45.194	Astatotilapia_calliptera
ENSDARG00000056830	si:ch211-107m4.1	99	50.129	ENSAMXG00000033712	si:ch211-107m4.1	100	49.869	Astyanax_mexicanus
ENSDARG00000056830	si:ch211-107m4.1	71	43.907	ENSBTAG00000002510	HNRNPUL2	94	38.295	Bos_taurus
ENSDARG00000056830	si:ch211-107m4.1	70	43.893	ENSCJAG00000018709	-	94	38.544	Callithrix_jacchus
ENSDARG00000056830	si:ch211-107m4.1	71	44.874	ENSCAFG00000015686	-	94	38.972	Canis_familiaris
ENSDARG00000056830	si:ch211-107m4.1	71	44.874	ENSCAFG00020013120	-	94	38.972	Canis_lupus_dingo
ENSDARG00000056830	si:ch211-107m4.1	71	44.101	ENSCHIG00000020213	-	94	38.430	Capra_hircus
ENSDARG00000056830	si:ch211-107m4.1	70	40.541	ENSCCAG00000037674	-	94	36.842	Cebus_capucinus
ENSDARG00000056830	si:ch211-107m4.1	70	43.702	ENSCATG00000034588	-	97	36.388	Cercocebus_atys
ENSDARG00000056830	si:ch211-107m4.1	70	43.702	ENSCSAG00000006701	-	91	38.514	Chlorocebus_sabaeus
ENSDARG00000056830	si:ch211-107m4.1	70	45.079	ENSCPBG00000017963	-	94	38.503	Chrysemys_picta_bellii
ENSDARG00000056830	si:ch211-107m4.1	71	43.907	ENSCGRG00001017076	Hnrnpul2	94	37.838	Cricetulus_griseus_chok1gshd
ENSDARG00000056830	si:ch211-107m4.1	89	42.163	ENSCSEG00000005686	si:ch211-107m4.1	91	42.163	Cynoglossus_semilaevis
ENSDARG00000056830	si:ch211-107m4.1	94	41.507	ENSCVAG00000006862	si:ch211-107m4.1	94	41.532	Cyprinodon_variegatus
ENSDARG00000056830	si:ch211-107m4.1	70	43.396	ENSDNOG00000006508	-	97	37.549	Dasypus_novemcinctus
ENSDARG00000056830	si:ch211-107m4.1	70	44.576	ENSDORG00000008678	Hnrnpul2	94	38.377	Dipodomys_ordii
ENSDARG00000056830	si:ch211-107m4.1	72	44.615	ENSEASG00005011347	-	95	38.684	Equus_asinus_asinus
ENSDARG00000056830	si:ch211-107m4.1	71	44.487	ENSECAG00000020298	-	95	38.573	Equus_caballus
ENSDARG00000056830	si:ch211-107m4.1	94	76.744	ENSELUG00000008134	si:ch211-107m4.1	87	76.744	Esox_lucius
ENSDARG00000056830	si:ch211-107m4.1	71	44.101	ENSFCAG00000014766	-	95	38.566	Felis_catus
ENSDARG00000056830	si:ch211-107m4.1	84	49.598	ENSFHEG00000014731	si:ch211-107m4.1	94	49.598	Fundulus_heteroclitus
ENSDARG00000056830	si:ch211-107m4.1	99	40.710	ENSGAFG00000016579	si:ch211-107m4.1	99	40.437	Gambusia_affinis
ENSDARG00000056830	si:ch211-107m4.1	66	65.000	ENSGACG00000017006	si:ch211-107m4.1	77	51.970	Gasterosteus_aculeatus
ENSDARG00000056830	si:ch211-107m4.1	70	45.079	ENSGAGG00000016818	-	90	38.482	Gopherus_agassizii
ENSDARG00000056830	si:ch211-107m4.1	70	43.511	ENSGGOG00000011722	HNRNPUL2	94	38.327	Gorilla_gorilla
ENSDARG00000056830	si:ch211-107m4.1	96	44.714	ENSHBUG00000013076	si:ch211-107m4.1	99	44.714	Haplochromis_burtoni
ENSDARG00000056830	si:ch211-107m4.1	99	51.486	ENSIPUG00000009518	si:ch211-107m4.1	98	51.429	Ictalurus_punctatus
ENSDARG00000056830	si:ch211-107m4.1	71	44.487	ENSSTOG00000004327	-	94	38.514	Ictidomys_tridecemlineatus
ENSDARG00000056830	si:ch211-107m4.1	71	44.101	ENSJJAG00000011206	Hnrnpul2	94	38.566	Jaculus_jaculus
ENSDARG00000056830	si:ch211-107m4.1	75	51.147	ENSKMAG00000003651	si:ch211-107m4.1	83	50.805	Kryptolebias_marmoratus
ENSDARG00000056830	si:ch211-107m4.1	88	39.344	ENSLACG00000009304	-	99	38.372	Latimeria_chalumnae
ENSDARG00000056830	si:ch211-107m4.1	70	44.576	ENSLAFG00000005377	-	94	38.493	Loxodonta_africana
ENSDARG00000056830	si:ch211-107m4.1	70	43.702	ENSMFAG00000041014	-	97	36.388	Macaca_fascicularis
ENSDARG00000056830	si:ch211-107m4.1	70	43.702	ENSMNEG00000036955	-	94	38.618	Macaca_nemestrina
ENSDARG00000056830	si:ch211-107m4.1	89	42.946	ENSMAMG00000021489	si:ch211-107m4.1	88	42.791	Mastacembelus_armatus
ENSDARG00000056830	si:ch211-107m4.1	96	44.907	ENSMZEG00005005136	si:ch211-107m4.1	99	45.194	Maylandia_zebra
ENSDARG00000056830	si:ch211-107m4.1	71	43.654	ENSMAUG00000013163	Hnrnpul2	94	38.051	Mesocricetus_auratus
ENSDARG00000056830	si:ch211-107m4.1	70	44.970	ENSMICG00000009943	-	94	38.767	Microcebus_murinus
ENSDARG00000056830	si:ch211-107m4.1	59	46.429	ENSMOCG00000020000	Hnrnpul2	93	36.316	Microtus_ochrogaster
ENSDARG00000056830	si:ch211-107m4.1	61	63.415	ENSMALG00000011564	si:ch211-107m4.1	83	63.415	Monopterus_albus
ENSDARG00000056830	si:ch211-107m4.1	70	43.984	MGP_CAROLIEiJ_G0022656	Hnrnpul2	94	37.363	Mus_caroli
ENSDARG00000056830	si:ch211-107m4.1	70	44.181	ENSMUSG00000071659	Hnrnpul2	94	37.363	Mus_musculus
ENSDARG00000056830	si:ch211-107m4.1	70	44.576	MGP_PahariEiJ_G0014151	Hnrnpul2	94	37.775	Mus_pahari
ENSDARG00000056830	si:ch211-107m4.1	70	44.181	MGP_SPRETEiJ_G0023569	Hnrnpul2	94	38.019	Mus_spretus
ENSDARG00000056830	si:ch211-107m4.1	71	44.487	ENSMPUG00000013707	-	93	38.160	Mustela_putorius_furo
ENSDARG00000056830	si:ch211-107m4.1	70	45.168	ENSMLUG00000000412	-	94	39.357	Myotis_lucifugus
ENSDARG00000056830	si:ch211-107m4.1	71	44.681	ENSNGAG00000012005	Hnrnpul2	94	38.051	Nannospalax_galili
ENSDARG00000056830	si:ch211-107m4.1	89	43.566	ENSNBRG00000000429	si:ch211-107m4.1	86	43.101	Neolamprologus_brichardi
ENSDARG00000056830	si:ch211-107m4.1	75	58.974	ENSNLEG00000004077	-	94	38.011	Nomascus_leucogenys
ENSDARG00000056830	si:ch211-107m4.1	94	43.814	ENSONIG00000005422	si:ch211-107m4.1	99	43.441	Oreochromis_niloticus
ENSDARG00000056830	si:ch211-107m4.1	77	58.974	ENSOCUG00000009474	-	94	39.142	Oryctolagus_cuniculus
ENSDARG00000056830	si:ch211-107m4.1	89	41.589	ENSORLG00000024574	si:ch211-107m4.1	87	50.446	Oryzias_latipes
ENSDARG00000056830	si:ch211-107m4.1	84	47.047	ENSOMEG00000018153	si:ch211-107m4.1	95	46.654	Oryzias_melastigma
ENSDARG00000056830	si:ch211-107m4.1	66	45.041	ENSOGAG00000003302	-	98	38.741	Otolemur_garnettii
ENSDARG00000056830	si:ch211-107m4.1	71	44.101	ENSOARG00000016817	-	95	38.024	Ovis_aries
ENSDARG00000056830	si:ch211-107m4.1	71	44.101	ENSPPRG00000006380	-	95	38.566	Panthera_pardus
ENSDARG00000056830	si:ch211-107m4.1	70	43.702	ENSPANG00000023745	-	99	39.470	Papio_anubis
ENSDARG00000056830	si:ch211-107m4.1	71	44.101	ENSPEMG00000015546	Hnrnpul2	94	37.585	Peromyscus_maniculatus_bairdii
ENSDARG00000056830	si:ch211-107m4.1	69	44.146	ENSPCIG00000015254	-	52	44.275	Phascolarctos_cinereus
ENSDARG00000056830	si:ch211-107m4.1	59	51.843	ENSPFOG00000008050	si:ch211-107m4.1	99	42.344	Poecilia_formosa
ENSDARG00000056830	si:ch211-107m4.1	71	47.025	ENSPLAG00000003485	si:ch211-107m4.1	99	40.165	Poecilia_latipinna
ENSDARG00000056830	si:ch211-107m4.1	67	48.178	ENSPMEG00000005490	si:ch211-107m4.1	98	40.603	Poecilia_mexicana
ENSDARG00000056830	si:ch211-107m4.1	71	47.500	ENSPREG00000014973	si:ch211-107m4.1	99	40.915	Poecilia_reticulata
ENSDARG00000056830	si:ch211-107m4.1	70	45.168	ENSPCAG00000010016	-	94	38.011	Procavia_capensis
ENSDARG00000056830	si:ch211-107m4.1	70	44.773	ENSPCOG00000013502	-	94	38.472	Propithecus_coquereli
ENSDARG00000056830	si:ch211-107m4.1	70	44.773	ENSPVAG00000003475	-	94	38.546	Pteropus_vampyrus
ENSDARG00000056830	si:ch211-107m4.1	70	44.379	ENSRNOG00000019507	Hnrnpul2	94	38.440	Rattus_norvegicus
ENSDARG00000056830	si:ch211-107m4.1	70	43.702	ENSRBIG00000037820	-	97	36.280	Rhinopithecus_bieti
ENSDARG00000056830	si:ch211-107m4.1	70	43.702	ENSRROG00000036561	-	97	36.280	Rhinopithecus_roxellana
ENSDARG00000056830	si:ch211-107m4.1	79	74.419	ENSSFOG00015006544	si:ch211-107m4.1	68	74.419	Scleropages_formosus
ENSDARG00000056830	si:ch211-107m4.1	71	47.348	ENSSMAG00000017226	si:ch211-107m4.1	80	47.773	Scophthalmus_maximus
ENSDARG00000056830	si:ch211-107m4.1	89	43.122	ENSSPAG00000006972	si:ch211-107m4.1	99	41.029	Stegastes_partitus
ENSDARG00000056830	si:ch211-107m4.1	70	43.960	ENSSSCG00000028542	-	91	38.272	Sus_scrofa
ENSDARG00000056830	si:ch211-107m4.1	89	40.735	ENSTRUG00000012843	si:ch211-107m4.1	100	38.790	Takifugu_rubripes
ENSDARG00000056830	si:ch211-107m4.1	88	40.763	ENSTNIG00000000741	si:ch211-107m4.1	100	41.527	Tetraodon_nigroviridis
ENSDARG00000056830	si:ch211-107m4.1	58	50.920	ENSTTRG00000002475	-	82	40.541	Tursiops_truncatus
ENSDARG00000056830	si:ch211-107m4.1	71	44.487	ENSUAMG00000025971	-	94	38.701	Ursus_americanus
ENSDARG00000056830	si:ch211-107m4.1	71	44.681	ENSVVUG00000029847	-	94	38.836	Vulpes_vulpes
ENSDARG00000056830	si:ch211-107m4.1	70	42.292	ENSXETG00000006015	hnrnpul2	91	37.412	Xenopus_tropicalis
ENSDARG00000056830	si:ch211-107m4.1	67	48.140	ENSXMAG00000003224	si:ch211-107m4.1	98	40.843	Xiphophorus_maculatus