EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000056903 (Gene tree)
Gene ID: 553555
Gene Symbol: mrpl13
Alias: zgc:109948
Full Name: mitochondrial ribosomal protein L13
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 45001 bases
Position: chr16:15052513-15097513
Accession: ZDB-GENE-050522-167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000073936	Ribosomal_L13	PF00572.18	3.2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000079480	-	693	-	ENSDARP00000073936	179 (aa)	-	F1QQ34

Gene Model

Click here to download ENSDARG00000056903's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000056903's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000056903	mrpl13	99	77.528	ENSG00000172172	MRPL13	98	82.609	Homo_sapiens
ENSDARG00000056903	mrpl13	100	87.709	ENSAPOG00000004881	mrpl13	100	87.709	Acanthochromis_polyacanthus
ENSDARG00000056903	mrpl13	99	75.843	ENSAMEG00000002225	MRPL13	100	75.843	Ailuropoda_melanoleuca
ENSDARG00000056903	mrpl13	100	85.475	ENSACIG00000011101	mrpl13	100	85.475	Amphilophus_citrinellus
ENSDARG00000056903	mrpl13	100	86.592	ENSAOCG00000001749	mrpl13	100	86.592	Amphiprion_ocellaris
ENSDARG00000056903	mrpl13	100	86.592	ENSAPEG00000019583	mrpl13	100	86.592	Amphiprion_percula
ENSDARG00000056903	mrpl13	100	86.592	ENSATEG00000023882	mrpl13	100	86.592	Anabas_testudineus
ENSDARG00000056903	mrpl13	96	76.163	ENSACAG00000009255	MRPL13	81	76.163	Anolis_carolinensis
ENSDARG00000056903	mrpl13	99	78.090	ENSANAG00000033601	MRPL13	100	78.090	Aotus_nancymaae
ENSDARG00000056903	mrpl13	100	86.034	ENSACLG00000013200	mrpl13	100	86.034	Astatotilapia_calliptera
ENSDARG00000056903	mrpl13	100	87.151	ENSAMXG00000041931	mrpl13	100	87.151	Astyanax_mexicanus
ENSDARG00000056903	mrpl13	99	76.966	ENSBTAG00000006767	MRPL13	100	76.966	Bos_taurus
ENSDARG00000056903	mrpl13	94	42.604	WBGene00008769	mrpl-13	82	42.604	Caenorhabditis_elegans
ENSDARG00000056903	mrpl13	99	78.090	ENSCJAG00000023047	-	100	78.090	Callithrix_jacchus
ENSDARG00000056903	mrpl13	99	78.652	ENSCJAG00000005359	-	100	78.652	Callithrix_jacchus
ENSDARG00000056903	mrpl13	99	75.281	ENSCAFG00000000940	MRPL13	100	75.281	Canis_familiaris
ENSDARG00000056903	mrpl13	96	75.000	ENSCAFG00020005790	MRPL13	100	75.000	Canis_lupus_dingo
ENSDARG00000056903	mrpl13	99	62.921	ENSCHIG00000008412	-	85	62.921	Capra_hircus
ENSDARG00000056903	mrpl13	99	73.596	ENSCHIG00000013190	-	100	73.596	Capra_hircus
ENSDARG00000056903	mrpl13	100	65.922	ENSCHIG00000006914	-	100	65.922	Capra_hircus
ENSDARG00000056903	mrpl13	96	76.744	ENSCHIG00000024054	-	100	76.744	Capra_hircus
ENSDARG00000056903	mrpl13	87	67.949	ENSTSYG00000011331	MRPL13	98	67.949	Carlito_syrichta
ENSDARG00000056903	mrpl13	94	73.373	ENSCAPG00000006896	MRPL13	100	73.373	Cavia_aperea
ENSDARG00000056903	mrpl13	99	73.596	ENSCPOG00000005791	MRPL13	100	73.596	Cavia_porcellus
ENSDARG00000056903	mrpl13	99	78.652	ENSCCAG00000034544	MRPL13	100	78.652	Cebus_capucinus
ENSDARG00000056903	mrpl13	99	76.966	ENSCATG00000044803	MRPL13	100	76.966	Cercocebus_atys
ENSDARG00000056903	mrpl13	99	74.719	ENSCLAG00000005646	MRPL13	100	74.719	Chinchilla_lanigera
ENSDARG00000056903	mrpl13	99	76.966	ENSCSAG00000010722	MRPL13	100	76.966	Chlorocebus_sabaeus
ENSDARG00000056903	mrpl13	99	61.326	ENSCHOG00000006926	MRPL13	100	61.326	Choloepus_hoffmanni
ENSDARG00000056903	mrpl13	99	73.446	ENSCPBG00000015289	MRPL13	64	73.446	Chrysemys_picta_bellii
ENSDARG00000056903	mrpl13	97	47.191	ENSCING00000005447	-	98	47.191	Ciona_intestinalis
ENSDARG00000056903	mrpl13	99	76.966	ENSCANG00000041741	MRPL13	100	76.966	Colobus_angolensis_palliatus
ENSDARG00000056903	mrpl13	99	74.157	ENSCGRG00001015700	Mrpl13	100	74.157	Cricetulus_griseus_chok1gshd
ENSDARG00000056903	mrpl13	57	73.529	ENSCGRG00000018038	Mrpl13	100	73.529	Cricetulus_griseus_crigri
ENSDARG00000056903	mrpl13	100	84.916	ENSCSEG00000005024	mrpl13	100	84.916	Cynoglossus_semilaevis
ENSDARG00000056903	mrpl13	100	87.151	ENSCVAG00000019608	mrpl13	100	87.151	Cyprinodon_variegatus
ENSDARG00000056903	mrpl13	99	75.281	ENSDNOG00000046226	MRPL13	100	75.281	Dasypus_novemcinctus
ENSDARG00000056903	mrpl13	99	75.843	ENSDORG00000016654	Mrpl13	100	75.843	Dipodomys_ordii
ENSDARG00000056903	mrpl13	99	46.328	FBgn0032720	mRpL13	99	46.328	Drosophila_melanogaster
ENSDARG00000056903	mrpl13	99	48.876	ENSETEG00000017682	MRPL13	100	48.876	Echinops_telfairi
ENSDARG00000056903	mrpl13	58	74.038	ENSEBUG00000007958	-	58	74.038	Eptatretus_burgeri
ENSDARG00000056903	mrpl13	99	76.966	ENSECAG00000021161	MRPL13	100	76.966	Equus_caballus
ENSDARG00000056903	mrpl13	99	68.539	ENSEEUG00000006391	MRPL13	100	68.539	Erinaceus_europaeus
ENSDARG00000056903	mrpl13	100	82.123	ENSELUG00000023304	mrpl13	100	82.123	Esox_lucius
ENSDARG00000056903	mrpl13	99	73.596	ENSFCAG00000001463	MRPL13	100	73.596	Felis_catus
ENSDARG00000056903	mrpl13	87	72.258	ENSFALG00000002422	MRPL13	100	72.258	Ficedula_albicollis
ENSDARG00000056903	mrpl13	99	73.596	ENSFDAG00000006554	MRPL13	100	73.596	Fukomys_damarensis
ENSDARG00000056903	mrpl13	100	86.592	ENSFHEG00000001907	mrpl13	100	86.592	Fundulus_heteroclitus
ENSDARG00000056903	mrpl13	77	83.333	ENSGMOG00000004838	mrpl13	100	83.333	Gadus_morhua
ENSDARG00000056903	mrpl13	100	70.391	ENSGALG00000041863	MRPL13	100	70.391	Gallus_gallus
ENSDARG00000056903	mrpl13	100	86.592	ENSGAFG00000002007	mrpl13	100	86.592	Gambusia_affinis
ENSDARG00000056903	mrpl13	82	86.301	ENSGACG00000007061	mrpl13	100	86.301	Gasterosteus_aculeatus
ENSDARG00000056903	mrpl13	99	74.576	ENSGAGG00000025331	-	99	74.576	Gopherus_agassizii
ENSDARG00000056903	mrpl13	99	69.663	ENSGGOG00000024629	MRPL13	100	69.663	Gorilla_gorilla
ENSDARG00000056903	mrpl13	100	86.592	ENSHBUG00000012259	mrpl13	100	86.592	Haplochromis_burtoni
ENSDARG00000056903	mrpl13	99	74.157	ENSHGLG00000007021	MRPL13	100	74.157	Heterocephalus_glaber_female
ENSDARG00000056903	mrpl13	99	74.157	ENSHGLG00100016348	MRPL13	100	74.157	Heterocephalus_glaber_male
ENSDARG00000056903	mrpl13	100	85.475	ENSHCOG00000012037	mrpl13	100	85.475	Hippocampus_comes
ENSDARG00000056903	mrpl13	100	87.709	ENSIPUG00000009071	mrpl13	100	87.709	Ictalurus_punctatus
ENSDARG00000056903	mrpl13	99	74.719	ENSSTOG00000014264	MRPL13	100	74.719	Ictidomys_tridecemlineatus
ENSDARG00000056903	mrpl13	99	74.719	ENSJJAG00000019308	Mrpl13	100	74.719	Jaculus_jaculus
ENSDARG00000056903	mrpl13	100	82.123	ENSKMAG00000018091	mrpl13	100	82.123	Kryptolebias_marmoratus
ENSDARG00000056903	mrpl13	100	84.916	ENSLBEG00000006340	mrpl13	100	84.916	Labrus_bergylta
ENSDARG00000056903	mrpl13	96	82.558	ENSLACG00000015467	MRPL13	98	82.558	Latimeria_chalumnae
ENSDARG00000056903	mrpl13	100	84.916	ENSLOCG00000009210	mrpl13	100	84.916	Lepisosteus_oculatus
ENSDARG00000056903	mrpl13	98	73.864	ENSLAFG00000012985	MRPL13	99	73.864	Loxodonta_africana
ENSDARG00000056903	mrpl13	99	76.966	ENSMFAG00000009755	MRPL13	100	76.966	Macaca_fascicularis
ENSDARG00000056903	mrpl13	99	76.966	ENSMMUG00000002599	MRPL13	100	76.966	Macaca_mulatta
ENSDARG00000056903	mrpl13	99	76.966	ENSMNEG00000034159	MRPL13	100	76.966	Macaca_nemestrina
ENSDARG00000056903	mrpl13	99	76.966	ENSMLEG00000009613	MRPL13	100	76.966	Mandrillus_leucophaeus
ENSDARG00000056903	mrpl13	100	88.268	ENSMAMG00000023991	mrpl13	100	88.268	Mastacembelus_armatus
ENSDARG00000056903	mrpl13	100	86.034	ENSMZEG00005025500	mrpl13	100	86.034	Maylandia_zebra
ENSDARG00000056903	mrpl13	98	70.455	ENSMAUG00000015546	-	99	70.455	Mesocricetus_auratus
ENSDARG00000056903	mrpl13	55	77.551	ENSMAUG00000009122	-	100	77.551	Mesocricetus_auratus
ENSDARG00000056903	mrpl13	99	74.719	ENSMICG00000014630	MRPL13	100	74.719	Microcebus_murinus
ENSDARG00000056903	mrpl13	99	74.157	ENSMOCG00000018794	Mrpl13	100	74.157	Microtus_ochrogaster
ENSDARG00000056903	mrpl13	100	86.034	ENSMMOG00000008934	mrpl13	100	86.034	Mola_mola
ENSDARG00000056903	mrpl13	99	76.966	ENSMODG00000002300	MRPL13	100	76.966	Monodelphis_domestica
ENSDARG00000056903	mrpl13	96	87.135	ENSMALG00000008122	mrpl13	100	87.135	Monopterus_albus
ENSDARG00000056903	mrpl13	99	74.157	MGP_CAROLIEiJ_G0019799	Mrpl13	100	77.551	Mus_caroli
ENSDARG00000056903	mrpl13	99	74.719	ENSMUSG00000022370	Mrpl13	100	78.571	Mus_musculus
ENSDARG00000056903	mrpl13	99	75.281	MGP_PahariEiJ_G0019809	Mrpl13	100	78.571	Mus_pahari
ENSDARG00000056903	mrpl13	99	74.719	MGP_SPRETEiJ_G0020696	Mrpl13	100	78.571	Mus_spretus
ENSDARG00000056903	mrpl13	98	75.429	ENSMPUG00000001080	MRPL13	98	75.429	Mustela_putorius_furo
ENSDARG00000056903	mrpl13	99	76.404	ENSMLUG00000009756	MRPL13	100	76.404	Myotis_lucifugus
ENSDARG00000056903	mrpl13	99	77.528	ENSNGAG00000024334	Mrpl13	100	77.528	Nannospalax_galili
ENSDARG00000056903	mrpl13	100	86.034	ENSNBRG00000021965	mrpl13	100	86.034	Neolamprologus_brichardi
ENSDARG00000056903	mrpl13	99	77.528	ENSNLEG00000028268	MRPL13	100	77.528	Nomascus_leucogenys
ENSDARG00000056903	mrpl13	96	46.784	ENSMEUG00000004590	-	100	46.784	Notamacropus_eugenii
ENSDARG00000056903	mrpl13	98	74.432	ENSOPRG00000015721	MRPL13	100	74.432	Ochotona_princeps
ENSDARG00000056903	mrpl13	99	74.157	ENSODEG00000001950	MRPL13	100	74.157	Octodon_degus
ENSDARG00000056903	mrpl13	100	70.950	ENSOANG00000000414	MRPL13	100	70.950	Ornithorhynchus_anatinus
ENSDARG00000056903	mrpl13	99	74.719	ENSOCUG00000016189	MRPL13	100	74.719	Oryctolagus_cuniculus
ENSDARG00000056903	mrpl13	100	85.475	ENSORLG00000004647	mrpl13	100	85.475	Oryzias_latipes
ENSDARG00000056903	mrpl13	100	86.034	ENSORLG00020022623	mrpl13	100	86.034	Oryzias_latipes_hni
ENSDARG00000056903	mrpl13	96	86.047	ENSORLG00015008036	mrpl13	83	86.047	Oryzias_latipes_hsok
ENSDARG00000056903	mrpl13	100	84.358	ENSOMEG00000011732	mrpl13	100	84.358	Oryzias_melastigma
ENSDARG00000056903	mrpl13	100	72.626	ENSOGAG00000014284	MRPL13	100	72.626	Otolemur_garnettii
ENSDARG00000056903	mrpl13	99	75.843	ENSOARG00000019181	-	100	75.843	Ovis_aries
ENSDARG00000056903	mrpl13	99	68.182	ENSOARG00000017405	-	100	68.182	Ovis_aries
ENSDARG00000056903	mrpl13	99	77.528	ENSPPAG00000043579	MRPL13	100	77.528	Pan_paniscus
ENSDARG00000056903	mrpl13	99	73.596	ENSPPRG00000024807	MRPL13	100	73.596	Panthera_pardus
ENSDARG00000056903	mrpl13	99	73.596	ENSPTIG00000021819	MRPL13	100	73.596	Panthera_tigris_altaica
ENSDARG00000056903	mrpl13	99	77.528	ENSPTRG00000020541	MRPL13	100	77.528	Pan_troglodytes
ENSDARG00000056903	mrpl13	99	76.966	ENSPANG00000001115	MRPL13	100	76.966	Papio_anubis
ENSDARG00000056903	mrpl13	100	87.709	ENSPKIG00000018874	mrpl13	100	87.709	Paramormyrops_kingsleyae
ENSDARG00000056903	mrpl13	94	76.786	ENSPSIG00000008016	MRPL13	99	76.786	Pelodiscus_sinensis
ENSDARG00000056903	mrpl13	100	85.475	ENSPMGG00000022710	mrpl13	100	85.475	Periophthalmus_magnuspinnatus
ENSDARG00000056903	mrpl13	99	74.719	ENSPEMG00000016375	Mrpl13	100	74.719	Peromyscus_maniculatus_bairdii
ENSDARG00000056903	mrpl13	100	65.363	ENSPMAG00000007735	-	100	65.363	Petromyzon_marinus
ENSDARG00000056903	mrpl13	99	74.719	ENSPCIG00000019489	MRPL13	100	74.719	Phascolarctos_cinereus
ENSDARG00000056903	mrpl13	100	87.709	ENSPFOG00000010630	mrpl13	100	87.709	Poecilia_formosa
ENSDARG00000056903	mrpl13	100	87.709	ENSPLAG00000013671	mrpl13	100	87.709	Poecilia_latipinna
ENSDARG00000056903	mrpl13	100	87.709	ENSPMEG00000002019	mrpl13	100	87.709	Poecilia_mexicana
ENSDARG00000056903	mrpl13	100	87.709	ENSPREG00000009510	mrpl13	100	87.709	Poecilia_reticulata
ENSDARG00000056903	mrpl13	58	72.115	ENSPPYG00000018847	-	88	72.115	Pongo_abelii
ENSDARG00000056903	mrpl13	99	76.966	ENSPCAG00000001541	MRPL13	100	76.966	Procavia_capensis
ENSDARG00000056903	mrpl13	74	74.242	ENSPCOG00000016230	MRPL13	92	74.242	Propithecus_coquereli
ENSDARG00000056903	mrpl13	99	68.539	ENSPVAG00000003719	MRPL13	100	68.539	Pteropus_vampyrus
ENSDARG00000056903	mrpl13	100	86.592	ENSPNYG00000004669	mrpl13	100	86.592	Pundamilia_nyererei
ENSDARG00000056903	mrpl13	100	89.385	ENSPNAG00000009319	mrpl13	100	89.385	Pygocentrus_nattereri
ENSDARG00000056903	mrpl13	99	73.034	ENSRNOG00000004401	Mrpl13	100	73.034	Rattus_norvegicus
ENSDARG00000056903	mrpl13	96	66.092	ENSRBIG00000035341	MRPL13	98	66.092	Rhinopithecus_bieti
ENSDARG00000056903	mrpl13	99	77.528	ENSRROG00000044613	MRPL13	100	77.528	Rhinopithecus_roxellana
ENSDARG00000056903	mrpl13	99	78.652	ENSSBOG00000003037	MRPL13	100	78.652	Saimiri_boliviensis_boliviensis
ENSDARG00000056903	mrpl13	100	86.592	ENSSFOG00015005149	mrpl13	100	86.592	Scleropages_formosus
ENSDARG00000056903	mrpl13	100	86.034	ENSSMAG00000002558	mrpl13	100	86.034	Scophthalmus_maximus
ENSDARG00000056903	mrpl13	100	90.503	ENSSDUG00000016507	mrpl13	100	90.503	Seriola_dumerili
ENSDARG00000056903	mrpl13	100	89.944	ENSSLDG00000022405	mrpl13	100	89.944	Seriola_lalandi_dorsalis
ENSDARG00000056903	mrpl13	67	80.000	ENSSARG00000014236	MRPL13	100	80.000	Sorex_araneus
ENSDARG00000056903	mrpl13	100	74.860	ENSSPUG00000008445	MRPL13	100	74.860	Sphenodon_punctatus
ENSDARG00000056903	mrpl13	100	86.034	ENSSPAG00000013067	mrpl13	100	86.034	Stegastes_partitus
ENSDARG00000056903	mrpl13	99	76.404	ENSSSCG00000005996	MRPL13	90	76.404	Sus_scrofa
ENSDARG00000056903	mrpl13	100	85.475	ENSTRUG00000023240	mrpl13	100	85.475	Takifugu_rubripes
ENSDARG00000056903	mrpl13	96	75.145	ENSTNIG00000009643	mrpl13	97	75.145	Tetraodon_nigroviridis
ENSDARG00000056903	mrpl13	94	58.580	ENSTBEG00000004571	MRPL13	100	58.580	Tupaia_belangeri
ENSDARG00000056903	mrpl13	99	75.843	ENSTTRG00000005939	MRPL13	100	75.843	Tursiops_truncatus
ENSDARG00000056903	mrpl13	96	64.535	ENSUAMG00000009636	MRPL13	100	64.535	Ursus_americanus
ENSDARG00000056903	mrpl13	99	76.404	ENSUMAG00000021939	MRPL13	100	76.404	Ursus_maritimus
ENSDARG00000056903	mrpl13	99	68.539	ENSVPAG00000000774	MRPL13	100	68.539	Vicugna_pacos
ENSDARG00000056903	mrpl13	96	66.279	ENSVVUG00000016056	MRPL13	100	66.279	Vulpes_vulpes
ENSDARG00000056903	mrpl13	83	73.333	ENSXETG00000025658	mrpl13	95	79.200	Xenopus_tropicalis
ENSDARG00000056903	mrpl13	100	87.709	ENSXCOG00000016141	mrpl13	100	87.709	Xiphophorus_couchianus
ENSDARG00000056903	mrpl13	100	87.709	ENSXMAG00000010846	mrpl13	100	87.709	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005840	ribosome	21873635.	IBA	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0017148	negative regulation of translation	21873635.	IBA	Process