EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000056914 (Gene tree)
Gene ID: 678588
Gene Symbol: emg1
Alias: zgc:136360
Full Name: EMG1 N1-specific pseudouridine methyltransferase
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 3623 bases
Position: chr16:17254489-17258111
Accession: ZDB-GENE-060421-2909
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000073952	EMG1	PF03587.14	1e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000079497	-	1084	-	ENSDARP00000073952	238 (aa)	-	F1QQ17

Gene Model

Click here to download ENSDARG00000056914's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000056914's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000056914	emg1	97	67.382	ENSG00000126749	EMG1	95	67.382	Homo_sapiens
ENSDARG00000056914	emg1	98	85.043	ENSAPOG00000023213	emg1	99	85.043	Acanthochromis_polyacanthus
ENSDARG00000056914	emg1	100	65.984	ENSAMEG00000013753	EMG1	100	65.984	Ailuropoda_melanoleuca
ENSDARG00000056914	emg1	100	87.815	ENSACIG00000011786	emg1	100	87.815	Amphilophus_citrinellus
ENSDARG00000056914	emg1	98	86.752	ENSAOCG00000006520	emg1	95	86.752	Amphiprion_ocellaris
ENSDARG00000056914	emg1	98	86.752	ENSAPEG00000011094	emg1	95	86.752	Amphiprion_percula
ENSDARG00000056914	emg1	100	86.134	ENSATEG00000021642	emg1	100	86.134	Anabas_testudineus
ENSDARG00000056914	emg1	79	75.132	ENSAPLG00000005308	EMG1	100	75.132	Anas_platyrhynchos
ENSDARG00000056914	emg1	86	75.490	ENSACAG00000007210	EMG1	89	75.490	Anolis_carolinensis
ENSDARG00000056914	emg1	97	66.667	ENSANAG00000022855	-	96	66.667	Aotus_nancymaae
ENSDARG00000056914	emg1	99	62.979	ENSANAG00000029536	-	95	62.979	Aotus_nancymaae
ENSDARG00000056914	emg1	100	88.235	ENSACLG00000023688	emg1	100	88.235	Astatotilapia_calliptera
ENSDARG00000056914	emg1	100	89.496	ENSAMXG00000018994	emg1	100	89.496	Astyanax_mexicanus
ENSDARG00000056914	emg1	100	65.164	ENSBTAG00000013126	EMG1	70	65.164	Bos_taurus
ENSDARG00000056914	emg1	94	51.304	WBGene00012652	Y39A1A.14	98	51.304	Caenorhabditis_elegans
ENSDARG00000056914	emg1	95	68.421	ENSCJAG00000007120	EMG1	93	68.421	Callithrix_jacchus
ENSDARG00000056914	emg1	100	65.984	ENSCAFG00000014424	EMG1	100	65.984	Canis_familiaris
ENSDARG00000056914	emg1	100	65.984	ENSCAFG00020003127	EMG1	100	65.984	Canis_lupus_dingo
ENSDARG00000056914	emg1	100	64.754	ENSCHIG00000003188	EMG1	100	64.754	Capra_hircus
ENSDARG00000056914	emg1	63	72.185	ENSTSYG00000035847	EMG1	100	72.185	Carlito_syrichta
ENSDARG00000056914	emg1	63	73.510	ENSCAPG00000011212	EMG1	100	73.510	Cavia_aperea
ENSDARG00000056914	emg1	86	73.529	ENSCPOG00000025388	EMG1	84	73.529	Cavia_porcellus
ENSDARG00000056914	emg1	100	65.574	ENSCCAG00000033309	-	100	65.574	Cebus_capucinus
ENSDARG00000056914	emg1	61	59.589	ENSCCAG00000034889	-	85	59.589	Cebus_capucinus
ENSDARG00000056914	emg1	63	51.974	ENSCCAG00000024274	-	100	51.974	Cebus_capucinus
ENSDARG00000056914	emg1	100	65.574	ENSCATG00000016750	EMG1	100	65.574	Cercocebus_atys
ENSDARG00000056914	emg1	95	68.282	ENSCLAG00000015067	EMG1	92	68.282	Chinchilla_lanigera
ENSDARG00000056914	emg1	100	65.574	ENSCSAG00000010140	EMG1	100	65.574	Chlorocebus_sabaeus
ENSDARG00000056914	emg1	100	66.803	ENSCHOG00000002886	EMG1	100	66.803	Choloepus_hoffmanni
ENSDARG00000056914	emg1	72	73.684	ENSCPBG00000005167	EMG1	59	73.684	Chrysemys_picta_bellii
ENSDARG00000056914	emg1	98	66.809	ENSCING00000022202	-	99	66.809	Ciona_intestinalis
ENSDARG00000056914	emg1	97	64.655	ENSCSAVG00000005612	-	98	64.655	Ciona_savignyi
ENSDARG00000056914	emg1	100	65.984	ENSCANG00000043101	-	100	65.984	Colobus_angolensis_palliatus
ENSDARG00000056914	emg1	88	65.072	ENSCANG00000042498	-	100	70.000	Colobus_angolensis_palliatus
ENSDARG00000056914	emg1	86	75.980	ENSCGRG00001018228	Emg1	84	75.980	Cricetulus_griseus_chok1gshd
ENSDARG00000056914	emg1	86	75.980	ENSCGRG00000018238	Emg1	84	75.980	Cricetulus_griseus_crigri
ENSDARG00000056914	emg1	100	84.647	ENSCSEG00000020136	emg1	100	84.647	Cynoglossus_semilaevis
ENSDARG00000056914	emg1	98	84.681	ENSCVAG00000001164	emg1	99	84.681	Cyprinodon_variegatus
ENSDARG00000056914	emg1	86	75.980	ENSDNOG00000005533	EMG1	100	67.213	Dasypus_novemcinctus
ENSDARG00000056914	emg1	80	73.684	ENSDORG00000009795	Emg1	81	73.684	Dipodomys_ordii
ENSDARG00000056914	emg1	91	64.732	FBgn0029714	CG3527	89	64.732	Drosophila_melanogaster
ENSDARG00000056914	emg1	63	49.007	ENSETEG00000009111	-	99	49.007	Echinops_telfairi
ENSDARG00000056914	emg1	86	72.195	ENSEBUG00000008287	emg1	80	72.195	Eptatretus_burgeri
ENSDARG00000056914	emg1	100	65.574	ENSEASG00005016018	EMG1	100	65.574	Equus_asinus_asinus
ENSDARG00000056914	emg1	100	65.984	ENSECAG00000022412	EMG1	100	65.984	Equus_caballus
ENSDARG00000056914	emg1	86	74.510	ENSEEUG00000000065	EMG1	84	74.510	Erinaceus_europaeus
ENSDARG00000056914	emg1	99	68.085	ENSFCAG00000004288	EMG1	95	68.085	Felis_catus
ENSDARG00000056914	emg1	90	74.074	ENSFALG00000004617	EMG1	95	71.681	Ficedula_albicollis
ENSDARG00000056914	emg1	86	75.490	ENSFDAG00000011086	EMG1	84	75.490	Fukomys_damarensis
ENSDARG00000056914	emg1	54	83.846	ENSFHEG00000014379	emg1	59	83.846	Fundulus_heteroclitus
ENSDARG00000056914	emg1	58	70.290	ENSFHEG00000014307	emg1	82	70.290	Fundulus_heteroclitus
ENSDARG00000056914	emg1	100	86.555	ENSGMOG00000011025	emg1	98	86.555	Gadus_morhua
ENSDARG00000056914	emg1	100	69.167	ENSGALG00000014568	EMG1	100	69.167	Gallus_gallus
ENSDARG00000056914	emg1	98	83.830	ENSGAFG00000014143	emg1	99	83.830	Gambusia_affinis
ENSDARG00000056914	emg1	100	85.774	ENSGACG00000010330	emg1	98	85.774	Gasterosteus_aculeatus
ENSDARG00000056914	emg1	79	75.132	ENSGAGG00000005641	EMG1	100	74.834	Gopherus_agassizii
ENSDARG00000056914	emg1	97	66.953	ENSGGOG00000004287	EMG1	95	66.953	Gorilla_gorilla
ENSDARG00000056914	emg1	100	88.235	ENSHBUG00000014862	emg1	100	88.235	Haplochromis_burtoni
ENSDARG00000056914	emg1	86	75.000	ENSHGLG00000001300	EMG1	83	75.000	Heterocephalus_glaber_female
ENSDARG00000056914	emg1	86	75.000	ENSHGLG00100011644	EMG1	83	75.000	Heterocephalus_glaber_male
ENSDARG00000056914	emg1	100	86.975	ENSHCOG00000017870	emg1	100	86.975	Hippocampus_comes
ENSDARG00000056914	emg1	100	86.555	ENSIPUG00000008261	emg1	100	86.555	Ictalurus_punctatus
ENSDARG00000056914	emg1	94	66.946	ENSSTOG00000000387	EMG1	98	66.946	Ictidomys_tridecemlineatus
ENSDARG00000056914	emg1	95	68.421	ENSJJAG00000018448	Emg1	93	68.421	Jaculus_jaculus
ENSDARG00000056914	emg1	100	84.519	ENSKMAG00000007069	emg1	100	84.519	Kryptolebias_marmoratus
ENSDARG00000056914	emg1	100	86.555	ENSLBEG00000007424	emg1	100	86.555	Labrus_bergylta
ENSDARG00000056914	emg1	100	82.845	ENSLOCG00000008451	emg1	98	82.845	Lepisosteus_oculatus
ENSDARG00000056914	emg1	97	68.670	ENSLAFG00000001314	EMG1	95	68.670	Loxodonta_africana
ENSDARG00000056914	emg1	100	65.574	ENSMFAG00000037142	EMG1	100	65.574	Macaca_fascicularis
ENSDARG00000056914	emg1	100	65.574	ENSMMUG00000010207	EMG1	100	65.574	Macaca_mulatta
ENSDARG00000056914	emg1	100	65.574	ENSMNEG00000040907	EMG1	100	65.574	Macaca_nemestrina
ENSDARG00000056914	emg1	100	65.574	ENSMLEG00000026029	EMG1	100	65.574	Mandrillus_leucophaeus
ENSDARG00000056914	emg1	100	86.975	ENSMAMG00000001888	emg1	100	86.975	Mastacembelus_armatus
ENSDARG00000056914	emg1	100	88.235	ENSMZEG00005017546	emg1	100	88.235	Maylandia_zebra
ENSDARG00000056914	emg1	86	75.610	ENSMGAG00000014145	EMG1	85	75.610	Meleagris_gallopavo
ENSDARG00000056914	emg1	86	75.490	ENSMAUG00000011093	Emg1	84	75.490	Mesocricetus_auratus
ENSDARG00000056914	emg1	97	67.811	ENSMICG00000001790	EMG1	95	67.811	Microcebus_murinus
ENSDARG00000056914	emg1	86	75.490	ENSMOCG00000022570	Emg1	84	75.490	Microtus_ochrogaster
ENSDARG00000056914	emg1	100	86.555	ENSMMOG00000016090	emg1	100	86.555	Mola_mola
ENSDARG00000056914	emg1	94	69.643	ENSMODG00000018161	EMG1	95	67.373	Monodelphis_domestica
ENSDARG00000056914	emg1	100	84.454	ENSMALG00000022477	emg1	100	84.454	Monopterus_albus
ENSDARG00000056914	emg1	86	75.490	MGP_CAROLIEiJ_G0028844	Emg1	84	75.490	Mus_caroli
ENSDARG00000056914	emg1	86	75.980	ENSMUSG00000004268	Emg1	84	75.980	Mus_musculus
ENSDARG00000056914	emg1	100	67.213	MGP_PahariEiJ_G0022605	Emg1	100	67.213	Mus_pahari
ENSDARG00000056914	emg1	86	75.980	MGP_SPRETEiJ_G0029886	Emg1	84	75.980	Mus_spretus
ENSDARG00000056914	emg1	97	67.811	ENSMPUG00000016763	EMG1	95	67.811	Mustela_putorius_furo
ENSDARG00000056914	emg1	99	66.667	ENSMLUG00000009196	EMG1	95	66.667	Myotis_lucifugus
ENSDARG00000056914	emg1	86	74.510	ENSNGAG00000022592	Emg1	85	74.510	Nannospalax_galili
ENSDARG00000056914	emg1	100	88.235	ENSNBRG00000001192	emg1	100	88.235	Neolamprologus_brichardi
ENSDARG00000056914	emg1	99	66.525	ENSNLEG00000005080	EMG1	97	66.525	Nomascus_leucogenys
ENSDARG00000056914	emg1	92	65.455	ENSMEUG00000000831	EMG1	97	65.455	Notamacropus_eugenii
ENSDARG00000056914	emg1	79	73.936	ENSOPRG00000016878	-	100	73.936	Ochotona_princeps
ENSDARG00000056914	emg1	59	72.143	ENSOPRG00000004071	-	89	72.143	Ochotona_princeps
ENSDARG00000056914	emg1	86	73.529	ENSODEG00000004059	EMG1	84	73.529	Octodon_degus
ENSDARG00000056914	emg1	100	88.235	ENSONIG00000012893	emg1	99	88.235	Oreochromis_niloticus
ENSDARG00000056914	emg1	99	66.809	ENSOCUG00000003603	EMG1	95	66.809	Oryctolagus_cuniculus
ENSDARG00000056914	emg1	100	86.555	ENSORLG00000012146	emg1	97	86.555	Oryzias_latipes
ENSDARG00000056914	emg1	100	86.555	ENSORLG00020005499	emg1	100	86.555	Oryzias_latipes_hni
ENSDARG00000056914	emg1	100	86.555	ENSORLG00015011535	emg1	100	86.555	Oryzias_latipes_hsok
ENSDARG00000056914	emg1	100	85.714	ENSOMEG00000012687	emg1	100	85.714	Oryzias_melastigma
ENSDARG00000056914	emg1	86	75.000	ENSOGAG00000006975	EMG1	84	75.000	Otolemur_garnettii
ENSDARG00000056914	emg1	100	64.228	ENSOARG00000004923	EMG1	100	64.228	Ovis_aries
ENSDARG00000056914	emg1	100	65.984	ENSPPAG00000033046	EMG1	100	65.984	Pan_paniscus
ENSDARG00000056914	emg1	99	67.660	ENSPPRG00000012350	EMG1	95	67.660	Panthera_pardus
ENSDARG00000056914	emg1	99	67.660	ENSPTIG00000000358	EMG1	95	67.660	Panthera_tigris_altaica
ENSDARG00000056914	emg1	100	65.984	ENSPTRG00000048050	EMG1	100	65.984	Pan_troglodytes
ENSDARG00000056914	emg1	100	65.574	ENSPANG00000005523	-	100	65.574	Papio_anubis
ENSDARG00000056914	emg1	100	65.984	ENSPANG00000019398	-	100	65.984	Papio_anubis
ENSDARG00000056914	emg1	100	86.611	ENSPKIG00000025303	emg1	100	86.611	Paramormyrops_kingsleyae
ENSDARG00000056914	emg1	94	69.778	ENSPSIG00000011094	EMG1	95	69.778	Pelodiscus_sinensis
ENSDARG00000056914	emg1	99	86.441	ENSPMGG00000019918	emg1	99	86.441	Periophthalmus_magnuspinnatus
ENSDARG00000056914	emg1	86	75.490	ENSPEMG00000010244	Emg1	84	75.490	Peromyscus_maniculatus_bairdii
ENSDARG00000056914	emg1	94	69.196	ENSPCIG00000002814	EMG1	91	69.196	Phascolarctos_cinereus
ENSDARG00000056914	emg1	98	84.255	ENSPFOG00000013034	emg1	99	84.255	Poecilia_formosa
ENSDARG00000056914	emg1	98	84.255	ENSPLAG00000000125	emg1	99	84.255	Poecilia_latipinna
ENSDARG00000056914	emg1	98	84.681	ENSPMEG00000016802	emg1	99	84.681	Poecilia_mexicana
ENSDARG00000056914	emg1	99	84.034	ENSPREG00000010409	emg1	82	84.034	Poecilia_reticulata
ENSDARG00000056914	emg1	100	65.984	ENSPPYG00000004215	EMG1	100	65.984	Pongo_abelii
ENSDARG00000056914	emg1	86	62.255	ENSPCAG00000012368	EMG1	81	62.255	Procavia_capensis
ENSDARG00000056914	emg1	97	67.382	ENSPCOG00000028560	EMG1	95	67.382	Propithecus_coquereli
ENSDARG00000056914	emg1	87	73.558	ENSPVAG00000006030	EMG1	85	73.558	Pteropus_vampyrus
ENSDARG00000056914	emg1	100	88.235	ENSPNYG00000023172	emg1	100	88.235	Pundamilia_nyererei
ENSDARG00000056914	emg1	100	89.916	ENSPNAG00000019953	emg1	100	89.916	Pygocentrus_nattereri
ENSDARG00000056914	emg1	100	66.803	ENSRNOG00000012828	Emg1	100	66.803	Rattus_norvegicus
ENSDARG00000056914	emg1	100	66.393	ENSRBIG00000031315	EMG1	100	66.393	Rhinopithecus_bieti
ENSDARG00000056914	emg1	100	66.393	ENSRROG00000032961	EMG1	100	66.393	Rhinopithecus_roxellana
ENSDARG00000056914	emg1	88	50.228	YLR186W	EMG1	87	50.228	Saccharomyces_cerevisiae
ENSDARG00000056914	emg1	100	65.984	ENSSBOG00000029143	-	100	65.984	Saimiri_boliviensis_boliviensis
ENSDARG00000056914	emg1	97	49.785	ENSSBOG00000022895	-	96	49.785	Saimiri_boliviensis_boliviensis
ENSDARG00000056914	emg1	94	68.750	ENSSHAG00000016428	EMG1	97	66.525	Sarcophilus_harrisii
ENSDARG00000056914	emg1	100	84.937	ENSSFOG00015002421	emg1	100	84.937	Scleropages_formosus
ENSDARG00000056914	emg1	100	85.294	ENSSMAG00000011806	emg1	100	85.294	Scophthalmus_maximus
ENSDARG00000056914	emg1	100	86.555	ENSSDUG00000011345	emg1	95	86.555	Seriola_dumerili
ENSDARG00000056914	emg1	100	86.555	ENSSLDG00000023439	emg1	95	86.555	Seriola_lalandi_dorsalis
ENSDARG00000056914	emg1	99	56.198	ENSSARG00000002227	EMG1	99	56.198	Sorex_araneus
ENSDARG00000056914	emg1	86	75.122	ENSSPUG00000014446	EMG1	87	75.122	Sphenodon_punctatus
ENSDARG00000056914	emg1	98	87.124	ENSSPAG00000005460	emg1	99	87.124	Stegastes_partitus
ENSDARG00000056914	emg1	100	65.574	ENSSSCG00000026812	EMG1	100	65.574	Sus_scrofa
ENSDARG00000056914	emg1	86	76.098	ENSTGUG00000013271	EMG1	99	76.098	Taeniopygia_guttata
ENSDARG00000056914	emg1	100	84.874	ENSTRUG00000001906	emg1	100	84.874	Takifugu_rubripes
ENSDARG00000056914	emg1	100	86.134	ENSTNIG00000008047	emg1	98	86.134	Tetraodon_nigroviridis
ENSDARG00000056914	emg1	86	75.000	ENSTBEG00000015406	EMG1	98	75.000	Tupaia_belangeri
ENSDARG00000056914	emg1	100	53.279	ENSTTRG00000004810	EMG1	100	53.279	Tursiops_truncatus
ENSDARG00000056914	emg1	100	65.984	ENSUAMG00000026959	EMG1	100	65.984	Ursus_americanus
ENSDARG00000056914	emg1	100	65.984	ENSUMAG00000003248	EMG1	100	65.984	Ursus_maritimus
ENSDARG00000056914	emg1	88	72.727	ENSVVUG00000010807	EMG1	100	65.984	Vulpes_vulpes
ENSDARG00000056914	emg1	86	75.490	ENSXETG00000023917	emg1	99	75.490	Xenopus_tropicalis
ENSDARG00000056914	emg1	98	83.830	ENSXMAG00000011508	emg1	99	83.830	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0019843	rRNA binding	21873635.	IBA	Function
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0070037	rRNA (pseudouridine) methyltransferase activity	21873635.	IBA	Function
GO:0070475	rRNA base methylation	21873635.	IBA	Process