EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000056923 (Gene tree)
Gene ID: 323746
Gene Symbol: dbr1
Alias: wu:fc08f08|zgc:63930
Full Name: debranching RNA lariats 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 7936 bases
Position: chr9:27860332-27868267
Accession: ZDB-GENE-030131-2466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000073957	DBR1	PF05011.13	1.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000079502	-	2169	-	ENSDARP00000073957	568 (aa)	-	A8WHX2

Gene Model

Click here to download ENSDARG00000056923's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000056923's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000056923	dbr1	98	56.250	ENSG00000138231	DBR1	94	80.180	Homo_sapiens
ENSDARG00000056923	dbr1	99	67.993	ENSAPOG00000004318	dbr1	99	66.207	Acanthochromis_polyacanthus
ENSDARG00000056923	dbr1	76	63.510	ENSAMEG00000006272	DBR1	79	63.657	Ailuropoda_melanoleuca
ENSDARG00000056923	dbr1	100	68.330	ENSACIG00000020512	dbr1	99	69.231	Amphilophus_citrinellus
ENSDARG00000056923	dbr1	99	67.993	ENSAOCG00000008060	dbr1	99	66.839	Amphiprion_ocellaris
ENSDARG00000056923	dbr1	99	67.938	ENSAPEG00000021944	dbr1	99	66.782	Amphiprion_percula
ENSDARG00000056923	dbr1	99	68.448	ENSATEG00000019673	dbr1	99	68.557	Anabas_testudineus
ENSDARG00000056923	dbr1	99	54.593	ENSACAG00000016760	DBR1	99	53.793	Anolis_carolinensis
ENSDARG00000056923	dbr1	98	55.835	ENSANAG00000028952	DBR1	99	55.379	Aotus_nancymaae
ENSDARG00000056923	dbr1	99	67.530	ENSACLG00000024027	dbr1	99	67.530	Astatotilapia_calliptera
ENSDARG00000056923	dbr1	99	76.307	ENSAMXG00000030736	dbr1	99	75.567	Astyanax_mexicanus
ENSDARG00000056923	dbr1	99	54.021	ENSBTAG00000019949	DBR1	79	63.014	Bos_taurus
ENSDARG00000056923	dbr1	67	45.802	WBGene00000937	dbr-1	78	45.802	Caenorhabditis_elegans
ENSDARG00000056923	dbr1	98	55.714	ENSCJAG00000002433	DBR1	99	55.185	Callithrix_jacchus
ENSDARG00000056923	dbr1	76	64.908	ENSCAFG00000007501	DBR1	99	53.072	Canis_familiaris
ENSDARG00000056923	dbr1	76	64.908	ENSCAFG00020008060	DBR1	99	53.072	Canis_lupus_dingo
ENSDARG00000056923	dbr1	99	54.482	ENSCHIG00000026937	DBR1	79	62.785	Capra_hircus
ENSDARG00000056923	dbr1	100	54.737	ENSTSYG00000005317	DBR1	99	53.322	Carlito_syrichta
ENSDARG00000056923	dbr1	98	53.832	ENSCPOG00000006179	DBR1	99	53.065	Cavia_porcellus
ENSDARG00000056923	dbr1	98	56.071	ENSCCAG00000025708	DBR1	99	55.634	Cebus_capucinus
ENSDARG00000056923	dbr1	76	65.057	ENSCATG00000032054	DBR1	99	55.732	Cercocebus_atys
ENSDARG00000056923	dbr1	78	63.288	ENSCLAG00000001800	DBR1	99	54.007	Chinchilla_lanigera
ENSDARG00000056923	dbr1	76	64.598	ENSCSAG00000010977	DBR1	99	55.203	Chlorocebus_sabaeus
ENSDARG00000056923	dbr1	89	64.706	ENSCHOG00000000730	DBR1	89	64.706	Choloepus_hoffmanni
ENSDARG00000056923	dbr1	99	57.067	ENSCPBG00000007633	DBR1	90	56.890	Chrysemys_picta_bellii
ENSDARG00000056923	dbr1	78	52.116	ENSCING00000011388	-	89	56.667	Ciona_intestinalis
ENSDARG00000056923	dbr1	66	57.407	ENSCSAVG00000007545	-	100	57.407	Ciona_savignyi
ENSDARG00000056923	dbr1	99	56.483	ENSCANG00000024237	DBR1	99	55.732	Colobus_angolensis_palliatus
ENSDARG00000056923	dbr1	99	55.732	ENSCGRG00001018497	Dbr1	100	54.754	Cricetulus_griseus_chok1gshd
ENSDARG00000056923	dbr1	99	50.702	ENSCGRG00000005958	Dbr1	99	50.265	Cricetulus_griseus_crigri
ENSDARG00000056923	dbr1	99	65.685	ENSCSEG00000002813	dbr1	99	65.458	Cynoglossus_semilaevis
ENSDARG00000056923	dbr1	99	65.794	ENSCVAG00000019969	dbr1	99	65.679	Cyprinodon_variegatus
ENSDARG00000056923	dbr1	75	65.023	ENSDNOG00000043630	DBR1	99	55.789	Dasypus_novemcinctus
ENSDARG00000056923	dbr1	72	49.330	FBgn0035838	ldbr	78	51.914	Drosophila_melanogaster
ENSDARG00000056923	dbr1	57	81.343	ENSETEG00000011830	DBR1	59	81.343	Echinops_telfairi
ENSDARG00000056923	dbr1	76	53.089	ENSEBUG00000007494	dbr1	75	53.547	Eptatretus_burgeri
ENSDARG00000056923	dbr1	76	64.598	ENSEASG00005003788	DBR1	99	55.026	Equus_asinus_asinus
ENSDARG00000056923	dbr1	76	64.828	ENSECAG00000013920	DBR1	99	55.203	Equus_caballus
ENSDARG00000056923	dbr1	99	46.561	ENSEEUG00000007059	DBR1	99	46.561	Erinaceus_europaeus
ENSDARG00000056923	dbr1	99	72.711	ENSELUG00000005587	dbr1	100	73.063	Esox_lucius
ENSDARG00000056923	dbr1	98	55.714	ENSFCAG00000002229	DBR1	99	55.106	Felis_catus
ENSDARG00000056923	dbr1	99	56.491	ENSFALG00000013467	DBR1	86	56.316	Ficedula_albicollis
ENSDARG00000056923	dbr1	76	64.368	ENSFDAG00000009524	DBR1	79	63.470	Fukomys_damarensis
ENSDARG00000056923	dbr1	99	67.814	ENSFHEG00000001743	dbr1	99	68.158	Fundulus_heteroclitus
ENSDARG00000056923	dbr1	99	67.708	ENSGMOG00000006925	dbr1	99	67.478	Gadus_morhua
ENSDARG00000056923	dbr1	99	49.912	ENSGALG00000043797	DBR1	99	48.881	Gallus_gallus
ENSDARG00000056923	dbr1	99	66.025	ENSGAFG00000001046	dbr1	99	64.623	Gambusia_affinis
ENSDARG00000056923	dbr1	99	65.358	ENSGACG00000009122	dbr1	99	66.839	Gasterosteus_aculeatus
ENSDARG00000056923	dbr1	99	57.597	ENSGAGG00000001244	DBR1	100	55.497	Gopherus_agassizii
ENSDARG00000056923	dbr1	98	52.321	ENSGGOG00000004564	DBR1	99	51.404	Gorilla_gorilla
ENSDARG00000056923	dbr1	99	67.530	ENSHBUG00000000882	dbr1	99	67.530	Haplochromis_burtoni
ENSDARG00000056923	dbr1	78	64.944	ENSHGLG00000014529	Dbr1	80	65.138	Heterocephalus_glaber_female
ENSDARG00000056923	dbr1	78	64.944	ENSHGLG00100013202	Dbr1	80	65.138	Heterocephalus_glaber_male
ENSDARG00000056923	dbr1	99	64.273	ENSHCOG00000004179	dbr1	99	63.287	Hippocampus_comes
ENSDARG00000056923	dbr1	99	74.439	ENSIPUG00000023749	dbr1	100	75.217	Ictalurus_punctatus
ENSDARG00000056923	dbr1	76	65.826	ENSSTOG00000007122	DBR1	100	54.389	Ictidomys_tridecemlineatus
ENSDARG00000056923	dbr1	99	53.333	ENSJJAG00000017080	Dbr1	100	54.754	Jaculus_jaculus
ENSDARG00000056923	dbr1	99	64.747	ENSKMAG00000004869	dbr1	99	66.434	Kryptolebias_marmoratus
ENSDARG00000056923	dbr1	99	68.448	ENSLBEG00000021307	dbr1	99	68.259	Labrus_bergylta
ENSDARG00000056923	dbr1	99	59.895	ENSLACG00000005547	DBR1	100	59.720	Latimeria_chalumnae
ENSDARG00000056923	dbr1	99	66.667	ENSLOCG00000004160	dbr1	99	67.016	Lepisosteus_oculatus
ENSDARG00000056923	dbr1	99	55.106	ENSLAFG00000005827	DBR1	99	54.007	Loxodonta_africana
ENSDARG00000056923	dbr1	76	65.057	ENSMFAG00000043642	DBR1	99	55.124	Macaca_fascicularis
ENSDARG00000056923	dbr1	76	65.057	ENSMMUG00000021284	DBR1	99	55.124	Macaca_mulatta
ENSDARG00000056923	dbr1	76	65.057	ENSMNEG00000041740	DBR1	99	55.124	Macaca_nemestrina
ENSDARG00000056923	dbr1	66	52.394	ENSMLEG00000034542	DBR1	95	45.472	Mandrillus_leucophaeus
ENSDARG00000056923	dbr1	100	69.506	ENSMAMG00000012205	dbr1	100	69.676	Mastacembelus_armatus
ENSDARG00000056923	dbr1	99	67.530	ENSMZEG00005021338	dbr1	99	67.530	Maylandia_zebra
ENSDARG00000056923	dbr1	81	50.105	ENSMGAG00000002142	DBR1	99	49.582	Meleagris_gallopavo
ENSDARG00000056923	dbr1	99	55.044	ENSMAUG00000010037	Dbr1	100	54.754	Mesocricetus_auratus
ENSDARG00000056923	dbr1	76	64.828	ENSMICG00000049533	DBR1	99	55.439	Microcebus_murinus
ENSDARG00000056923	dbr1	99	54.225	ENSMOCG00000018746	Dbr1	99	54.577	Microtus_ochrogaster
ENSDARG00000056923	dbr1	99	67.295	ENSMMOG00000000719	dbr1	99	66.323	Mola_mola
ENSDARG00000056923	dbr1	99	55.950	ENSMODG00000018554	DBR1	99	53.114	Monodelphis_domestica
ENSDARG00000056923	dbr1	99	65.816	ENSMALG00000022283	dbr1	98	66.041	Monopterus_albus
ENSDARG00000056923	dbr1	98	54.821	MGP_CAROLIEiJ_G0032564	Dbr1	98	75.309	Mus_caroli
ENSDARG00000056923	dbr1	99	55.654	ENSMUSG00000032469	Dbr1	98	75.309	Mus_musculus
ENSDARG00000056923	dbr1	99	55.282	MGP_PahariEiJ_G0015433	Dbr1	98	75.309	Mus_pahari
ENSDARG00000056923	dbr1	99	56.261	MGP_SPRETEiJ_G0033708	Dbr1	98	75.309	Mus_spretus
ENSDARG00000056923	dbr1	76	64.138	ENSMPUG00000009230	DBR1	79	64.138	Mustela_putorius_furo
ENSDARG00000056923	dbr1	76	64.598	ENSMLUG00000026117	DBR1	99	55.536	Myotis_lucifugus
ENSDARG00000056923	dbr1	99	55.106	ENSNGAG00000003518	Dbr1	99	54.202	Nannospalax_galili
ENSDARG00000056923	dbr1	99	67.185	ENSNBRG00000016318	dbr1	99	67.185	Neolamprologus_brichardi
ENSDARG00000056923	dbr1	99	56.128	ENSNLEG00000032263	DBR1	98	56.063	Nomascus_leucogenys
ENSDARG00000056923	dbr1	99	55.417	ENSMEUG00000009188	DBR1	99	54.885	Notamacropus_eugenii
ENSDARG00000056923	dbr1	93	49.905	ENSOPRG00000016510	DBR1	78	57.895	Ochotona_princeps
ENSDARG00000056923	dbr1	99	55.185	ENSODEG00000018178	DBR1	99	54.657	Octodon_degus
ENSDARG00000056923	dbr1	99	66.724	ENSONIG00000013801	dbr1	99	67.581	Oreochromis_niloticus
ENSDARG00000056923	dbr1	93	55.932	ENSOCUG00000015129	DBR1	89	52.737	Oryctolagus_cuniculus
ENSDARG00000056923	dbr1	99	64.613	ENSORLG00015001112	dbr1	99	65.789	Oryzias_latipes_hsok
ENSDARG00000056923	dbr1	99	65.608	ENSOMEG00000000857	dbr1	99	64.903	Oryzias_melastigma
ENSDARG00000056923	dbr1	76	65.057	ENSOGAG00000033095	DBR1	99	56.085	Otolemur_garnettii
ENSDARG00000056923	dbr1	99	53.427	ENSOARG00000007589	DBR1	79	61.416	Ovis_aries
ENSDARG00000056923	dbr1	98	56.429	ENSPPAG00000031137	DBR1	99	55.439	Pan_paniscus
ENSDARG00000056923	dbr1	76	64.598	ENSPPRG00000013629	DBR1	79	64.598	Panthera_pardus
ENSDARG00000056923	dbr1	74	63.830	ENSPTIG00000012674	DBR1	77	63.830	Panthera_tigris_altaica
ENSDARG00000056923	dbr1	98	56.250	ENSPTRG00000015441	DBR1	99	55.263	Pan_troglodytes
ENSDARG00000056923	dbr1	76	64.828	ENSPANG00000012664	DBR1	99	55.556	Papio_anubis
ENSDARG00000056923	dbr1	99	70.783	ENSPKIG00000000310	dbr1	99	70.609	Paramormyrops_kingsleyae
ENSDARG00000056923	dbr1	88	52.838	ENSPSIG00000015486	DBR1	99	52.838	Pelodiscus_sinensis
ENSDARG00000056923	dbr1	98	54.741	ENSPEMG00000020602	Dbr1	99	53.671	Peromyscus_maniculatus_bairdii
ENSDARG00000056923	dbr1	66	60.053	ENSPMAG00000008620	dbr1	99	60.053	Petromyzon_marinus
ENSDARG00000056923	dbr1	99	55.595	ENSPCIG00000006494	DBR1	99	54.352	Phascolarctos_cinereus
ENSDARG00000056923	dbr1	99	66.783	ENSPLAG00000011665	dbr1	99	65.620	Poecilia_latipinna
ENSDARG00000056923	dbr1	70	57.778	ENSPLAG00000002421	-	99	56.158	Poecilia_latipinna
ENSDARG00000056923	dbr1	71	57.002	ENSPMEG00000020884	-	94	56.068	Poecilia_mexicana
ENSDARG00000056923	dbr1	99	66.958	ENSPMEG00000010080	dbr1	99	65.620	Poecilia_mexicana
ENSDARG00000056923	dbr1	99	67.190	ENSPREG00000020157	dbr1	99	65.734	Poecilia_reticulata
ENSDARG00000056923	dbr1	99	56.661	ENSPPYG00000014139	DBR1	99	56.591	Pongo_abelii
ENSDARG00000056923	dbr1	67	68.241	ENSPCAG00000012956	DBR1	98	68.241	Procavia_capensis
ENSDARG00000056923	dbr1	76	64.828	ENSPCOG00000016894	DBR1	99	55.536	Propithecus_coquereli
ENSDARG00000056923	dbr1	76	54.483	ENSPVAG00000007713	DBR1	99	47.359	Pteropus_vampyrus
ENSDARG00000056923	dbr1	99	65.917	ENSPNYG00000015453	dbr1	99	66.782	Pundamilia_nyererei
ENSDARG00000056923	dbr1	99	75.826	ENSPNAG00000025595	dbr1	100	76.696	Pygocentrus_nattereri
ENSDARG00000056923	dbr1	99	54.466	ENSRNOG00000014588	Dbr1	99	53.448	Rattus_norvegicus
ENSDARG00000056923	dbr1	76	64.598	ENSRBIG00000045002	DBR1	99	55.263	Rhinopithecus_bieti
ENSDARG00000056923	dbr1	76	64.598	ENSRROG00000044819	DBR1	99	55.263	Rhinopithecus_roxellana
ENSDARG00000056923	dbr1	52	38.462	YKL149C	DBR1	85	39.031	Saccharomyces_cerevisiae
ENSDARG00000056923	dbr1	98	55.714	ENSSBOG00000032048	DBR1	99	55.088	Saimiri_boliviensis_boliviensis
ENSDARG00000056923	dbr1	99	55.773	ENSSHAG00000006752	DBR1	99	53.584	Sarcophilus_harrisii
ENSDARG00000056923	dbr1	99	71.972	ENSSFOG00015011410	dbr1	99	71.675	Scleropages_formosus
ENSDARG00000056923	dbr1	99	67.938	ENSSMAG00000016078	dbr1	99	67.014	Scophthalmus_maximus
ENSDARG00000056923	dbr1	99	67.973	ENSSDUG00000017849	dbr1	99	68.376	Seriola_dumerili
ENSDARG00000056923	dbr1	99	68.205	ENSSLDG00000019891	dbr1	99	68.205	Seriola_lalandi_dorsalis
ENSDARG00000056923	dbr1	77	58.691	ENSSARG00000009558	-	80	59.039	Sorex_araneus
ENSDARG00000056923	dbr1	54	72.000	ENSSARG00000003148	-	74	72.000	Sorex_araneus
ENSDARG00000056923	dbr1	89	52.071	ENSSPUG00000004724	DBR1	92	51.064	Sphenodon_punctatus
ENSDARG00000056923	dbr1	99	68.750	ENSSPAG00000016892	dbr1	99	69.271	Stegastes_partitus
ENSDARG00000056923	dbr1	99	55.458	ENSSSCG00000031098	DBR1	99	54.466	Sus_scrofa
ENSDARG00000056923	dbr1	95	55.678	ENSTGUG00000007073	DBR1	98	55.128	Taeniopygia_guttata
ENSDARG00000056923	dbr1	100	64.098	ENSTRUG00000021594	dbr1	99	64.098	Takifugu_rubripes
ENSDARG00000056923	dbr1	99	63.542	ENSTNIG00000006710	dbr1	99	64.298	Tetraodon_nigroviridis
ENSDARG00000056923	dbr1	99	55.712	ENSTTRG00000004020	DBR1	79	64.828	Tursiops_truncatus
ENSDARG00000056923	dbr1	99	55.458	ENSUAMG00000004639	DBR1	79	64.368	Ursus_americanus
ENSDARG00000056923	dbr1	76	64.138	ENSUMAG00000015012	DBR1	79	64.138	Ursus_maritimus
ENSDARG00000056923	dbr1	75	59.207	ENSVPAG00000011711	DBR1	79	58.904	Vicugna_pacos
ENSDARG00000056923	dbr1	76	64.679	ENSVVUG00000026604	DBR1	99	52.901	Vulpes_vulpes
ENSDARG00000056923	dbr1	99	55.846	ENSXETG00000027491	dbr1	99	55.497	Xenopus_tropicalis
ENSDARG00000056923	dbr1	99	67.426	ENSXCOG00000018078	dbr1	99	66.025	Xiphophorus_couchianus
ENSDARG00000056923	dbr1	99	67.250	ENSXMAG00000007311	dbr1	99	65.499	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000375	RNA splicing, via transesterification reactions	-	ISS	Process
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISS	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008419	RNA lariat debranching enzyme activity	21873635.	IBA	Function
GO:0008419	RNA lariat debranching enzyme activity	-	ISS	Function
GO:0016787	hydrolase activity	-	IEA	Function
GO:0016788	hydrolase activity, acting on ester bonds	-	IEA	Function