EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000057141 (Gene tree)
Gene ID: 664755
Gene Symbol: zgc:110045
Alias: -
Full Name: zgc:110045
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 27293 bases
Position: chr13:16230556-16257848
Accession: ZDB-GENE-050706-149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000074197	KH_1	PF00013.29	2.8e-35	1	2
ENSDARP00000074197	KH_1	PF00013.29	2.8e-35	2	2
ENSDARP00000074197	KH_2	PF07650.17	4.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000079745	-	1408	XM_005156688	ENSDARP00000074197	224 (aa)	XP_005156745	F6NHC4

Gene Model

Click here to download ENSDARG00000057141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000057141's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000057141	zgc:110045	95	69.953	ENSDARG00000024276	pcbp4	80	70.079
ENSDARG00000057141	zgc:110045	83	30.899	ENSDARG00000010266	igf2bp3	68	30.899
ENSDARG00000057141	zgc:110045	69	34.328	ENSDARG00000020178	nova1	95	34.247
ENSDARG00000057141	zgc:110045	95	73.239	ENSDARG00000099039	pcbp2	68	73.239
ENSDARG00000057141	zgc:110045	87	81.313	ENSDARG00000054378	pcbp3	82	81.313
ENSDARG00000057141	zgc:110045	68	36.290	ENSDARG00000099758	igf2bp2b	79	30.088
ENSDARG00000057141	zgc:110045	82	37.879	ENSDARG00000018914	hnrnpk	72	30.357
ENSDARG00000057141	zgc:110045	64	31.169	ENSDARG00000026489	khsrp	50	36.207
ENSDARG00000057141	zgc:110045	67	36.170	ENSDARG00000003421	igf2bp2a	65	35.135
ENSDARG00000057141	zgc:110045	72	30.000	ENSDARG00000086896	fubp3	55	32.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000057141	zgc:110045	95	77.064	ENSG00000183570	PCBP3	91	72.038	Homo_sapiens
ENSDARG00000057141	zgc:110045	97	79.724	ENSAPOG00000023735	zgc:110045	67	79.724	Acanthochromis_polyacanthus
ENSDARG00000057141	zgc:110045	97	76.147	ENSACIG00000002577	zgc:110045	99	76.147	Amphilophus_citrinellus
ENSDARG00000057141	zgc:110045	89	77.500	ENSAOCG00000005266	zgc:110045	94	77.500	Amphiprion_ocellaris
ENSDARG00000057141	zgc:110045	97	79.263	ENSAPEG00000000729	zgc:110045	50	79.263	Amphiprion_percula
ENSDARG00000057141	zgc:110045	81	85.714	ENSATEG00000011191	zgc:110045	65	85.714	Anabas_testudineus
ENSDARG00000057141	zgc:110045	97	79.724	ENSACLG00000019285	zgc:110045	50	79.724	Astatotilapia_calliptera
ENSDARG00000057141	zgc:110045	94	77.778	ENSBTAG00000030775	PCBP3	81	74.026	Bos_taurus
ENSDARG00000057141	zgc:110045	94	77.778	ENSCAFG00000011907	PCBP3	76	77.778	Canis_familiaris
ENSDARG00000057141	zgc:110045	94	74.074	ENSCHIG00000015841	PCBP3	71	74.074	Capra_hircus
ENSDARG00000057141	zgc:110045	95	71.429	ENSTSYG00000005254	PCBP3	91	71.429	Carlito_syrichta
ENSDARG00000057141	zgc:110045	94	77.778	ENSCPOG00000003648	PCBP3	72	77.778	Cavia_porcellus
ENSDARG00000057141	zgc:110045	94	77.778	ENSCCAG00000024561	PCBP3	85	71.362	Cebus_capucinus
ENSDARG00000057141	zgc:110045	94	77.778	ENSCATG00000038419	PCBP3	84	72.038	Cercocebus_atys
ENSDARG00000057141	zgc:110045	94	77.778	ENSCLAG00000006667	PCBP3	72	77.778	Chinchilla_lanigera
ENSDARG00000057141	zgc:110045	94	77.778	ENSCANG00000026757	PCBP3	85	71.362	Colobus_angolensis_palliatus
ENSDARG00000057141	zgc:110045	94	77.778	ENSCGRG00001006836	Pcbp3	72	77.778	Cricetulus_griseus_chok1gshd
ENSDARG00000057141	zgc:110045	94	77.778	ENSCGRG00000001837	Pcbp3	72	77.778	Cricetulus_griseus_crigri
ENSDARG00000057141	zgc:110045	97	78.802	ENSCSEG00000010020	zgc:110045	91	79.535	Cynoglossus_semilaevis
ENSDARG00000057141	zgc:110045	98	72.727	ENSCVAG00000004726	zgc:110045	98	72.727	Cyprinodon_variegatus
ENSDARG00000057141	zgc:110045	94	77.778	ENSDNOG00000049518	PCBP3	72	77.778	Dasypus_novemcinctus
ENSDARG00000057141	zgc:110045	97	70.588	ENSDORG00000003640	Pcbp3	96	70.588	Dipodomys_ordii
ENSDARG00000057141	zgc:110045	94	72.381	ENSEBUG00000009697	zgc:110045	91	73.262	Eptatretus_burgeri
ENSDARG00000057141	zgc:110045	93	78.404	ENSEASG00005007068	PCBP3	75	78.404	Equus_asinus_asinus
ENSDARG00000057141	zgc:110045	93	78.404	ENSECAG00000012413	PCBP3	75	78.404	Equus_caballus
ENSDARG00000057141	zgc:110045	97	78.995	ENSELUG00000019784	zgc:110045	52	81.818	Esox_lucius
ENSDARG00000057141	zgc:110045	94	77.778	ENSFCAG00000014812	PCBP3	85	71.362	Felis_catus
ENSDARG00000057141	zgc:110045	94	77.778	ENSFDAG00000009117	PCBP3	76	77.778	Fukomys_damarensis
ENSDARG00000057141	zgc:110045	89	77.500	ENSFHEG00000018838	-	92	77.500	Fundulus_heteroclitus
ENSDARG00000057141	zgc:110045	97	78.733	ENSGMOG00000005953	zgc:110045	66	78.733	Gadus_morhua
ENSDARG00000057141	zgc:110045	97	80.645	ENSGAFG00000017864	zgc:110045	96	80.645	Gambusia_affinis
ENSDARG00000057141	zgc:110045	96	80.000	ENSGACG00000003044	zgc:110045	66	80.000	Gasterosteus_aculeatus
ENSDARG00000057141	zgc:110045	94	77.778	ENSGGOG00000003683	PCBP3	85	71.362	Gorilla_gorilla
ENSDARG00000057141	zgc:110045	97	79.724	ENSHBUG00000012495	zgc:110045	67	79.724	Haplochromis_burtoni
ENSDARG00000057141	zgc:110045	94	77.778	ENSHGLG00000018620	PCBP3	72	77.778	Heterocephalus_glaber_female
ENSDARG00000057141	zgc:110045	94	77.778	ENSHGLG00100013590	PCBP3	72	77.778	Heterocephalus_glaber_male
ENSDARG00000057141	zgc:110045	97	76.712	ENSHCOG00000000818	zgc:110045	99	76.712	Hippocampus_comes
ENSDARG00000057141	zgc:110045	99	86.607	ENSIPUG00000003932	zgc:110045	83	86.607	Ictalurus_punctatus
ENSDARG00000057141	zgc:110045	94	77.778	ENSSTOG00000007178	PCBP3	72	77.778	Ictidomys_tridecemlineatus
ENSDARG00000057141	zgc:110045	94	77.778	ENSJJAG00000021192	Pcbp3	72	77.778	Jaculus_jaculus
ENSDARG00000057141	zgc:110045	86	84.375	ENSKMAG00000016179	-	94	84.375	Kryptolebias_marmoratus
ENSDARG00000057141	zgc:110045	89	80.597	ENSLBEG00000023074	zgc:110045	84	82.778	Labrus_bergylta
ENSDARG00000057141	zgc:110045	94	75.000	ENSLAFG00000020835	PCBP3	79	75.000	Loxodonta_africana
ENSDARG00000057141	zgc:110045	94	77.778	ENSMFAG00000034574	PCBP3	85	71.362	Macaca_fascicularis
ENSDARG00000057141	zgc:110045	94	77.778	ENSMMUG00000003825	PCBP3	96	66.000	Macaca_mulatta
ENSDARG00000057141	zgc:110045	94	77.778	ENSMNEG00000035551	PCBP3	84	77.778	Macaca_nemestrina
ENSDARG00000057141	zgc:110045	94	77.778	ENSMLEG00000038785	PCBP3	85	71.362	Mandrillus_leucophaeus
ENSDARG00000057141	zgc:110045	97	79.263	ENSMAMG00000014389	zgc:110045	69	79.263	Mastacembelus_armatus
ENSDARG00000057141	zgc:110045	97	79.724	ENSMZEG00005011785	zgc:110045	50	79.724	Maylandia_zebra
ENSDARG00000057141	zgc:110045	93	78.404	ENSMAUG00000007036	Pcbp3	71	78.404	Mesocricetus_auratus
ENSDARG00000057141	zgc:110045	94	77.315	ENSMICG00000012679	PCBP3	85	70.892	Microcebus_murinus
ENSDARG00000057141	zgc:110045	94	77.778	ENSMOCG00000016127	Pcbp3	72	77.778	Microtus_ochrogaster
ENSDARG00000057141	zgc:110045	89	78.000	ENSMMOG00000008399	zgc:110045	95	78.000	Mola_mola
ENSDARG00000057141	zgc:110045	89	74.874	ENSMALG00000008763	zgc:110045	96	74.874	Monopterus_albus
ENSDARG00000057141	zgc:110045	97	76.444	MGP_CAROLIEiJ_G0015475	Pcbp3	95	76.444	Mus_caroli
ENSDARG00000057141	zgc:110045	97	76.444	ENSMUSG00000001120	Pcbp3	95	76.444	Mus_musculus
ENSDARG00000057141	zgc:110045	97	76.444	MGP_PahariEiJ_G0030889	Pcbp3	95	76.444	Mus_pahari
ENSDARG00000057141	zgc:110045	97	76.444	MGP_SPRETEiJ_G0016288	Pcbp3	95	76.444	Mus_spretus
ENSDARG00000057141	zgc:110045	94	77.778	ENSMLUG00000003074	PCBP3	81	77.778	Myotis_lucifugus
ENSDARG00000057141	zgc:110045	94	77.778	ENSNGAG00000005416	Pcbp3	72	77.778	Nannospalax_galili
ENSDARG00000057141	zgc:110045	97	79.724	ENSNBRG00000017646	zgc:110045	50	79.724	Neolamprologus_brichardi
ENSDARG00000057141	zgc:110045	94	77.778	ENSNLEG00000002639	PCBP3	85	71.362	Nomascus_leucogenys
ENSDARG00000057141	zgc:110045	95	74.026	ENSMEUG00000012960	PCBP3	64	74.026	Notamacropus_eugenii
ENSDARG00000057141	zgc:110045	94	74.074	ENSODEG00000012873	PCBP3	72	74.074	Octodon_degus
ENSDARG00000057141	zgc:110045	97	79.724	ENSONIG00000010370	zgc:110045	53	79.724	Oreochromis_niloticus
ENSDARG00000057141	zgc:110045	94	74.672	ENSOANG00000006265	PCBP3	81	74.672	Ornithorhynchus_anatinus
ENSDARG00000057141	zgc:110045	97	79.724	ENSORLG00000014385	-	50	79.724	Oryzias_latipes
ENSDARG00000057141	zgc:110045	97	79.263	ENSORLG00020003139	zgc:110045	89	76.498	Oryzias_latipes_hni
ENSDARG00000057141	zgc:110045	97	80.184	ENSOMEG00000015459	-	50	80.184	Oryzias_melastigma
ENSDARG00000057141	zgc:110045	94	73.611	ENSOARG00000012704	PCBP3	73	73.611	Ovis_aries
ENSDARG00000057141	zgc:110045	94	77.778	ENSPPAG00000021940	PCBP3	85	71.362	Pan_paniscus
ENSDARG00000057141	zgc:110045	94	77.778	ENSPPRG00000003933	PCBP3	85	71.362	Panthera_pardus
ENSDARG00000057141	zgc:110045	94	56.621	ENSPTIG00000012038	PCBP3	85	57.870	Panthera_tigris_altaica
ENSDARG00000057141	zgc:110045	92	49.275	ENSPTRG00000014010	PCBP3	78	46.491	Pan_troglodytes
ENSDARG00000057141	zgc:110045	94	77.778	ENSPANG00000023631	PCBP3	85	71.362	Papio_anubis
ENSDARG00000057141	zgc:110045	93	60.094	ENSPMGG00000022531	-	93	60.094	Periophthalmus_magnuspinnatus
ENSDARG00000057141	zgc:110045	94	77.778	ENSPEMG00000000587	Pcbp3	72	77.778	Peromyscus_maniculatus_bairdii
ENSDARG00000057141	zgc:110045	68	73.171	ENSPMAG00000004719	zgc:110045	96	73.171	Petromyzon_marinus
ENSDARG00000057141	zgc:110045	93	82.212	ENSPFOG00000002348	zgc:110045	64	82.212	Poecilia_formosa
ENSDARG00000057141	zgc:110045	97	77.419	ENSPLAG00000017488	zgc:110045	95	77.419	Poecilia_latipinna
ENSDARG00000057141	zgc:110045	97	80.645	ENSPMEG00000012762	zgc:110045	96	80.645	Poecilia_mexicana
ENSDARG00000057141	zgc:110045	97	79.724	ENSPREG00000001797	zgc:110045	95	80.465	Poecilia_reticulata
ENSDARG00000057141	zgc:110045	89	75.897	ENSPPYG00000011525	-	68	75.897	Pongo_abelii
ENSDARG00000057141	zgc:110045	92	59.821	ENSPCAG00000001454	PCBP3	65	59.821	Procavia_capensis
ENSDARG00000057141	zgc:110045	94	77.315	ENSPCOG00000013797	PCBP3	85	70.892	Propithecus_coquereli
ENSDARG00000057141	zgc:110045	94	74.236	ENSPVAG00000000832	PCBP3	63	74.236	Pteropus_vampyrus
ENSDARG00000057141	zgc:110045	97	76.606	ENSPNYG00000004637	zgc:110045	99	76.606	Pundamilia_nyererei
ENSDARG00000057141	zgc:110045	99	91.031	ENSPNAG00000004501	zgc:110045	99	91.031	Pygocentrus_nattereri
ENSDARG00000057141	zgc:110045	94	77.778	ENSRROG00000034567	PCBP3	85	71.362	Rhinopithecus_roxellana
ENSDARG00000057141	zgc:110045	94	77.778	ENSSBOG00000005789	PCBP3	85	71.362	Saimiri_boliviensis_boliviensis
ENSDARG00000057141	zgc:110045	97	80.184	ENSSMAG00000013541	zgc:110045	91	80.930	Scophthalmus_maximus
ENSDARG00000057141	zgc:110045	97	79.724	ENSSLDG00000021064	zgc:110045	50	79.724	Seriola_lalandi_dorsalis
ENSDARG00000057141	zgc:110045	61	79.562	ENSSARG00000007629	-	68	79.562	Sorex_araneus
ENSDARG00000057141	zgc:110045	97	79.724	ENSSPAG00000000563	zgc:110045	67	79.724	Stegastes_partitus
ENSDARG00000057141	zgc:110045	94	77.778	ENSSSCG00000023041	PCBP3	77	77.778	Sus_scrofa
ENSDARG00000057141	zgc:110045	87	84.021	ENSTRUG00000017789	zgc:110045	96	84.021	Takifugu_rubripes
ENSDARG00000057141	zgc:110045	83	80.423	ENSTNIG00000003546	zgc:110045	93	80.423	Tetraodon_nigroviridis
ENSDARG00000057141	zgc:110045	94	57.407	ENSTBEG00000011882	-	65	57.407	Tupaia_belangeri
ENSDARG00000057141	zgc:110045	94	74.074	ENSUAMG00000006491	PCBP3	92	67.241	Ursus_americanus
ENSDARG00000057141	zgc:110045	80	76.503	ENSUMAG00000025403	PCBP3	66	76.503	Ursus_maritimus
ENSDARG00000057141	zgc:110045	94	72.685	ENSVVUG00000023862	PCBP3	62	71.889	Vulpes_vulpes
ENSDARG00000057141	zgc:110045	76	79.532	ENSXCOG00000005968	zgc:110045	87	79.532	Xiphophorus_couchianus
ENSDARG00000057141	zgc:110045	97	79.724	ENSXMAG00000008030	zgc:110045	50	79.724	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process