EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000057562 (Gene tree)
Gene ID: 393201
Gene Symbol: polr3c
Alias: zgc:56348
Full Name: polymerase (RNA) III (DNA directed) polypeptide C
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 31055 bases
Position: chr16:14249546-14280600
Accession: ZDB-GENE-040426-992
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000059966	RNA_pol_Rpc82	PF05645.13	3.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000059967	-	2027	-	ENSDARP00000059966	539 (aa)	-	F1QNQ7

Gene Model

Click here to download ENSDARG00000057562's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03020	RNA polymerase	KEGG
dre04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000057562's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000057562	polr3c	99	65.242	ENSG00000186141	POLR3C	99	65.985	Homo_sapiens
ENSDARG00000057562	polr3c	99	77.331	ENSAPOG00000008722	polr3c	99	77.574	Acanthochromis_polyacanthus
ENSDARG00000057562	polr3c	99	65.613	ENSAMEG00000017531	POLR3C	99	66.171	Ailuropoda_melanoleuca
ENSDARG00000057562	polr3c	99	78.142	ENSACIG00000008064	polr3c	100	78.142	Amphilophus_citrinellus
ENSDARG00000057562	polr3c	99	78.625	ENSAOCG00000011695	polr3c	99	78.625	Amphiprion_ocellaris
ENSDARG00000057562	polr3c	99	78.625	ENSAPEG00000004426	polr3c	99	78.625	Amphiprion_percula
ENSDARG00000057562	polr3c	99	79.852	ENSATEG00000023618	polr3c	92	80.000	Anabas_testudineus
ENSDARG00000057562	polr3c	99	65.613	ENSANAG00000036434	POLR3C	99	66.357	Aotus_nancymaae
ENSDARG00000057562	polr3c	99	77.514	ENSACLG00000019970	polr3c	99	77.514	Astatotilapia_calliptera
ENSDARG00000057562	polr3c	99	80.926	ENSAMXG00000008273	polr3c	99	81.146	Astyanax_mexicanus
ENSDARG00000057562	polr3c	99	66.729	ENSBTAG00000021637	POLR3C	99	66.729	Bos_taurus
ENSDARG00000057562	polr3c	99	65.428	ENSCJAG00000002314	POLR3C	99	66.171	Callithrix_jacchus
ENSDARG00000057562	polr3c	99	65.799	ENSCAFG00000011257	POLR3C	99	65.799	Canis_familiaris
ENSDARG00000057562	polr3c	95	64.922	ENSCAFG00020020066	POLR3C	99	64.922	Canis_lupus_dingo
ENSDARG00000057562	polr3c	99	66.543	ENSCHIG00000022431	POLR3C	99	66.543	Capra_hircus
ENSDARG00000057562	polr3c	99	65.056	ENSTSYG00000002292	POLR3C	99	65.799	Carlito_syrichta
ENSDARG00000057562	polr3c	95	51.072	ENSCAPG00000011559	POLR3C	100	51.072	Cavia_aperea
ENSDARG00000057562	polr3c	99	65.613	ENSCPOG00000004654	POLR3C	99	65.613	Cavia_porcellus
ENSDARG00000057562	polr3c	99	65.613	ENSCCAG00000027077	POLR3C	99	65.985	Cebus_capucinus
ENSDARG00000057562	polr3c	99	65.056	ENSCATG00000040166	POLR3C	99	65.799	Cercocebus_atys
ENSDARG00000057562	polr3c	87	77.917	ENSCLAG00000001652	POLR3C	98	77.917	Chinchilla_lanigera
ENSDARG00000057562	polr3c	99	65.428	ENSCSAG00000001762	POLR3C	99	66.171	Chlorocebus_sabaeus
ENSDARG00000057562	polr3c	99	63.383	ENSCHOG00000006911	POLR3C	99	64.126	Choloepus_hoffmanni
ENSDARG00000057562	polr3c	99	66.171	ENSCPBG00000007883	POLR3C	99	66.171	Chrysemys_picta_bellii
ENSDARG00000057562	polr3c	99	44.834	ENSCING00000007024	-	100	45.203	Ciona_intestinalis
ENSDARG00000057562	polr3c	99	45.203	ENSCSAVG00000008586	-	99	45.203	Ciona_savignyi
ENSDARG00000057562	polr3c	99	65.242	ENSCANG00000032538	POLR3C	99	65.985	Colobus_angolensis_palliatus
ENSDARG00000057562	polr3c	99	65.177	ENSCGRG00001005471	Polr3c	99	65.736	Cricetulus_griseus_chok1gshd
ENSDARG00000057562	polr3c	99	65.177	ENSCGRG00000016787	Polr3c	99	65.736	Cricetulus_griseus_crigri
ENSDARG00000057562	polr3c	99	78.373	ENSCSEG00000002425	polr3c	98	78.318	Cynoglossus_semilaevis
ENSDARG00000057562	polr3c	99	74.954	ENSCVAG00000022458	polr3c	100	75.320	Cyprinodon_variegatus
ENSDARG00000057562	polr3c	99	74.954	ENSCVAG00000009443	polr3c	100	75.320	Cyprinodon_variegatus
ENSDARG00000057562	polr3c	71	68.312	ENSDNOG00000012149	POLR3C	99	69.351	Dasypus_novemcinctus
ENSDARG00000057562	polr3c	99	65.922	ENSDORG00000013430	Polr3c	99	65.922	Dipodomys_ordii
ENSDARG00000057562	polr3c	99	30.912	FBgn0038057	CG12267	97	30.912	Drosophila_melanogaster
ENSDARG00000057562	polr3c	100	55.904	ENSETEG00000017696	POLR3C	100	56.642	Echinops_telfairi
ENSDARG00000057562	polr3c	99	65.242	ENSEASG00005007417	POLR3C	99	65.985	Equus_asinus_asinus
ENSDARG00000057562	polr3c	99	62.825	ENSECAG00000023713	POLR3C	99	63.569	Equus_caballus
ENSDARG00000057562	polr3c	99	62.942	ENSEEUG00000011124	POLR3C	99	63.687	Erinaceus_europaeus
ENSDARG00000057562	polr3c	99	81.331	ENSELUG00000013209	polr3c	99	81.667	Esox_lucius
ENSDARG00000057562	polr3c	99	65.613	ENSFCAG00000013360	POLR3C	99	66.171	Felis_catus
ENSDARG00000057562	polr3c	99	65.242	ENSFDAG00000021078	POLR3C	99	65.242	Fukomys_damarensis
ENSDARG00000057562	polr3c	99	75.137	ENSFHEG00000000872	polr3c	100	75.503	Fundulus_heteroclitus
ENSDARG00000057562	polr3c	99	75.556	ENSGMOG00000018937	polr3c	99	75.556	Gadus_morhua
ENSDARG00000057562	polr3c	86	61.588	ENSGALG00000052515	-	100	61.159	Gallus_gallus
ENSDARG00000057562	polr3c	99	76.051	ENSGAFG00000014721	polr3c	100	76.234	Gambusia_affinis
ENSDARG00000057562	polr3c	99	78.067	ENSGACG00000011829	polr3c	99	78.253	Gasterosteus_aculeatus
ENSDARG00000057562	polr3c	99	65.613	ENSGAGG00000010176	POLR3C	99	65.613	Gopherus_agassizii
ENSDARG00000057562	polr3c	99	65.056	ENSGGOG00000007279	POLR3C	99	65.799	Gorilla_gorilla
ENSDARG00000057562	polr3c	99	77.514	ENSHBUG00000003619	polr3c	99	77.514	Haplochromis_burtoni
ENSDARG00000057562	polr3c	99	65.056	ENSHGLG00000014978	POLR3C	99	65.056	Heterocephalus_glaber_female
ENSDARG00000057562	polr3c	99	65.056	ENSHGLG00100015620	POLR3C	99	65.056	Heterocephalus_glaber_male
ENSDARG00000057562	polr3c	99	75.093	ENSHCOG00000000823	polr3c	99	75.093	Hippocampus_comes
ENSDARG00000057562	polr3c	100	82.149	ENSIPUG00000008657	polr3c	100	82.878	Ictalurus_punctatus
ENSDARG00000057562	polr3c	99	66.171	ENSSTOG00000014601	POLR3C	99	66.171	Ictidomys_tridecemlineatus
ENSDARG00000057562	polr3c	99	66.045	ENSJJAG00000011447	Polr3c	99	66.045	Jaculus_jaculus
ENSDARG00000057562	polr3c	99	75.551	ENSKMAG00000001574	polr3c	99	75.735	Kryptolebias_marmoratus
ENSDARG00000057562	polr3c	99	78.453	ENSLBEG00000026567	polr3c	99	78.453	Labrus_bergylta
ENSDARG00000057562	polr3c	100	63.333	ENSLACG00000017216	POLR3C	100	63.653	Latimeria_chalumnae
ENSDARG00000057562	polr3c	100	66.974	ENSLOCG00000006400	polr3c	100	67.159	Lepisosteus_oculatus
ENSDARG00000057562	polr3c	99	65.428	ENSLAFG00000029485	POLR3C	99	66.171	Loxodonta_africana
ENSDARG00000057562	polr3c	99	65.242	ENSMFAG00000040338	POLR3C	99	65.985	Macaca_fascicularis
ENSDARG00000057562	polr3c	99	65.242	ENSMMUG00000016735	POLR3C	99	65.985	Macaca_mulatta
ENSDARG00000057562	polr3c	99	65.242	ENSMNEG00000040944	POLR3C	99	65.985	Macaca_nemestrina
ENSDARG00000057562	polr3c	99	65.242	ENSMLEG00000031091	POLR3C	99	65.985	Mandrillus_leucophaeus
ENSDARG00000057562	polr3c	99	77.716	ENSMAMG00000014770	polr3c	99	77.716	Mastacembelus_armatus
ENSDARG00000057562	polr3c	99	76.965	ENSMZEG00005015882	polr3c	99	76.965	Maylandia_zebra
ENSDARG00000057562	polr3c	78	54.632	ENSMAUG00000021521	-	98	54.632	Mesocricetus_auratus
ENSDARG00000057562	polr3c	99	65.736	ENSMAUG00000001454	-	99	65.736	Mesocricetus_auratus
ENSDARG00000057562	polr3c	99	66.357	ENSMICG00000034253	POLR3C	99	66.357	Microcebus_murinus
ENSDARG00000057562	polr3c	99	60.223	ENSMOCG00000000997	Polr3c	99	60.223	Microtus_ochrogaster
ENSDARG00000057562	polr3c	99	79.298	ENSMMOG00000003989	polr3c	100	79.298	Mola_mola
ENSDARG00000057562	polr3c	99	65.613	ENSMODG00000018745	-	74	65.613	Monodelphis_domestica
ENSDARG00000057562	polr3c	99	77.819	ENSMALG00000000156	polr3c	99	77.819	Monopterus_albus
ENSDARG00000057562	polr3c	99	65.922	MGP_CAROLIEiJ_G0025390	Polr3c	99	66.667	Mus_caroli
ENSDARG00000057562	polr3c	99	66.294	ENSMUSG00000028099	Polr3c	99	66.294	Mus_musculus
ENSDARG00000057562	polr3c	99	65.549	MGP_PahariEiJ_G0026835	Polr3c	99	66.294	Mus_pahari
ENSDARG00000057562	polr3c	99	65.177	MGP_SPRETEiJ_G0026337	Polr3c	99	65.922	Mus_spretus
ENSDARG00000057562	polr3c	99	65.799	ENSMPUG00000000656	POLR3C	99	65.799	Mustela_putorius_furo
ENSDARG00000057562	polr3c	99	65.677	ENSMLUG00000004060	POLR3C	99	65.677	Myotis_lucifugus
ENSDARG00000057562	polr3c	99	65.177	ENSNGAG00000013090	Polr3c	99	65.736	Nannospalax_galili
ENSDARG00000057562	polr3c	99	77.331	ENSNBRG00000003707	polr3c	99	77.879	Neolamprologus_brichardi
ENSDARG00000057562	polr3c	99	65.242	ENSNLEG00000005645	POLR3C	99	65.985	Nomascus_leucogenys
ENSDARG00000057562	polr3c	86	78.049	ENSMEUG00000012664	POLR3C	86	78.049	Notamacropus_eugenii
ENSDARG00000057562	polr3c	99	64.498	ENSOPRG00000004244	POLR3C	99	64.498	Ochotona_princeps
ENSDARG00000057562	polr3c	99	65.056	ENSODEG00000000304	POLR3C	99	65.056	Octodon_degus
ENSDARG00000057562	polr3c	99	77.879	ENSONIG00000006370	polr3c	99	77.879	Oreochromis_niloticus
ENSDARG00000057562	polr3c	67	46.322	ENSOANG00000000559	-	100	46.322	Ornithorhynchus_anatinus
ENSDARG00000057562	polr3c	99	65.985	ENSOCUG00000003050	POLR3C	99	65.985	Oryctolagus_cuniculus
ENSDARG00000057562	polr3c	99	76.252	ENSORLG00000010133	polr3c	99	76.252	Oryzias_latipes
ENSDARG00000057562	polr3c	99	76.155	ENSORLG00020009245	polr3c	99	76.155	Oryzias_latipes_hni
ENSDARG00000057562	polr3c	99	75.881	ENSORLG00015015223	polr3c	99	75.881	Oryzias_latipes_hsok
ENSDARG00000057562	polr3c	99	76.296	ENSOMEG00000008558	polr3c	99	76.296	Oryzias_melastigma
ENSDARG00000057562	polr3c	99	64.498	ENSOGAG00000000209	POLR3C	99	65.242	Otolemur_garnettii
ENSDARG00000057562	polr3c	99	66.543	ENSOARG00000020588	POLR3C	99	66.543	Ovis_aries
ENSDARG00000057562	polr3c	99	65.056	ENSPPAG00000025184	POLR3C	99	65.799	Pan_paniscus
ENSDARG00000057562	polr3c	99	65.613	ENSPPRG00000008809	POLR3C	99	66.171	Panthera_pardus
ENSDARG00000057562	polr3c	99	65.613	ENSPTIG00000009916	POLR3C	99	66.171	Panthera_tigris_altaica
ENSDARG00000057562	polr3c	99	65.242	ENSPTRG00000001208	POLR3C	99	65.985	Pan_troglodytes
ENSDARG00000057562	polr3c	99	65.056	ENSPANG00000019404	POLR3C	99	65.799	Papio_anubis
ENSDARG00000057562	polr3c	100	75.868	ENSPKIG00000014883	polr3c	100	75.868	Paramormyrops_kingsleyae
ENSDARG00000057562	polr3c	99	65.985	ENSPSIG00000004694	POLR3C	99	65.985	Pelodiscus_sinensis
ENSDARG00000057562	polr3c	99	77.383	ENSPMGG00000007761	polr3c	99	77.383	Periophthalmus_magnuspinnatus
ENSDARG00000057562	polr3c	99	65.363	ENSPEMG00000016322	Polr3c	99	66.108	Peromyscus_maniculatus_bairdii
ENSDARG00000057562	polr3c	100	61.314	ENSPMAG00000006993	polr3c	99	61.314	Petromyzon_marinus
ENSDARG00000057562	polr3c	99	65.428	ENSPCIG00000011954	POLR3C	99	65.985	Phascolarctos_cinereus
ENSDARG00000057562	polr3c	99	74.818	ENSPFOG00000014106	polr3c	100	75.730	Poecilia_formosa
ENSDARG00000057562	polr3c	99	75.836	ENSPLAG00000018932	polr3c	100	76.208	Poecilia_latipinna
ENSDARG00000057562	polr3c	99	75.000	ENSPMEG00000023273	polr3c	100	75.730	Poecilia_mexicana
ENSDARG00000057562	polr3c	99	76.340	ENSPREG00000017050	polr3c	100	76.340	Poecilia_reticulata
ENSDARG00000057562	polr3c	99	65.056	ENSPPYG00000000936	POLR3C	99	65.799	Pongo_abelii
ENSDARG00000057562	polr3c	90	66.667	ENSPCAG00000010501	POLR3C	99	67.485	Procavia_capensis
ENSDARG00000057562	polr3c	99	57.471	ENSPCOG00000024937	POLR3C	99	58.140	Propithecus_coquereli
ENSDARG00000057562	polr3c	99	65.799	ENSPVAG00000014483	POLR3C	99	66.543	Pteropus_vampyrus
ENSDARG00000057562	polr3c	99	77.514	ENSPNYG00000004504	polr3c	99	77.514	Pundamilia_nyererei
ENSDARG00000057562	polr3c	98	81.835	ENSPNAG00000018675	polr3c	100	82.537	Pygocentrus_nattereri
ENSDARG00000057562	polr3c	99	65.736	ENSRNOG00000033560	Polr3c	99	66.294	Rattus_norvegicus
ENSDARG00000057562	polr3c	99	65.056	ENSRBIG00000035432	POLR3C	99	65.799	Rhinopithecus_bieti
ENSDARG00000057562	polr3c	99	65.056	ENSRROG00000039959	POLR3C	99	65.799	Rhinopithecus_roxellana
ENSDARG00000057562	polr3c	90	63.580	ENSSBOG00000028429	POLR3C	99	64.403	Saimiri_boliviensis_boliviensis
ENSDARG00000057562	polr3c	99	64.870	ENSSHAG00000018565	POLR3C	99	65.428	Sarcophilus_harrisii
ENSDARG00000057562	polr3c	100	78.637	ENSSFOG00015021863	polr3c	100	79.006	Scleropages_formosus
ENSDARG00000057562	polr3c	99	78.253	ENSSMAG00000016000	polr3c	99	79.368	Scophthalmus_maximus
ENSDARG00000057562	polr3c	99	80.297	ENSSDUG00000006590	polr3c	99	80.297	Seriola_dumerili
ENSDARG00000057562	polr3c	99	79.182	ENSSLDG00000015614	polr3c	99	79.182	Seriola_lalandi_dorsalis
ENSDARG00000057562	polr3c	61	73.193	ENSSARG00000014380	POLR3C	99	73.193	Sorex_araneus
ENSDARG00000057562	polr3c	99	65.799	ENSSPUG00000001834	POLR3C	99	65.799	Sphenodon_punctatus
ENSDARG00000057562	polr3c	99	77.509	ENSSPAG00000022520	polr3c	99	77.509	Stegastes_partitus
ENSDARG00000057562	polr3c	99	65.613	ENSSSCG00000006691	POLR3C	99	65.613	Sus_scrofa
ENSDARG00000057562	polr3c	99	59.480	ENSTGUG00000016941	POLR3C	99	59.480	Taeniopygia_guttata
ENSDARG00000057562	polr3c	99	75.601	ENSTRUG00000010726	polr3c	100	75.741	Takifugu_rubripes
ENSDARG00000057562	polr3c	99	76.296	ENSTNIG00000019501	polr3c	100	76.481	Tetraodon_nigroviridis
ENSDARG00000057562	polr3c	74	67.250	ENSTBEG00000015610	POLR3C	99	68.250	Tupaia_belangeri
ENSDARG00000057562	polr3c	53	65.432	ENSTTRG00000009216	POLR3C	54	65.432	Tursiops_truncatus
ENSDARG00000057562	polr3c	99	65.428	ENSUAMG00000021906	POLR3C	99	65.985	Ursus_americanus
ENSDARG00000057562	polr3c	99	65.428	ENSUMAG00000010180	POLR3C	99	65.985	Ursus_maritimus
ENSDARG00000057562	polr3c	99	65.242	ENSVVUG00000007421	POLR3C	99	65.242	Vulpes_vulpes
ENSDARG00000057562	polr3c	99	71.375	ENSXCOG00000019524	polr3c	100	71.375	Xiphophorus_couchianus
ENSDARG00000057562	polr3c	99	75.320	ENSXMAG00000016215	polr3c	100	75.686	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001056	RNA polymerase III activity	21873635.	IBA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003697	single-stranded DNA binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0005666	RNA polymerase III complex	-	IEA	Component
GO:0006351	transcription, DNA-templated	-	IEA	Process