EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDARG00000057583 (Gene tree)
Gene ID: 407633
Gene Symbol: prrc2c
Alias: si:ch211-191d7.6
Full Name: proline-rich coiled-coil 2C
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 39344
Position: chr20: 15023263-15062606
Accession: ZDB-GENE-081104-156
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
28381614	Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition	ZGA & embryo	2017 Apr 5	Despic V	DOI: 10.1101/gr.215954.116

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000175585	-	8442	XM_009294615	ENSDARP00000144610	2814 (aa)	XP_009292890	A0A286YBN1
ENSDART00000135212	-	6297	-	ENSDARP00000119834	2098 (aa)	-	F1R9E5

Gene Model

Click here to download ENSDARG00000057583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000057583's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000057583	prrc2c	53	39.316	ENSDARG00000031494	prrc2a	81	77.500	Danio_rerio
ENSDARG00000057583	prrc2c	74	60.719	ENSG00000117523	PRRC2C	93	60.362	Homo_sapiens
ENSDARG00000057583	prrc2c	57	40.625	ENSG00000130723	PRRC2B	100	57.895	Homo_sapiens
ENSDARG00000057583	prrc2c	55	61.506	ENSMUSG00000040225	Prrc2c	99	71.698	Mus_musculus