EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000057805 (Gene tree)
Gene ID: 554098
Gene Symbol: mrpl28
Alias: wu:fa96b11|zgc:110013
Full Name: mitochondrial ribosomal protein L28
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 10359 bases
Position: chr15:17128282-17138640
Accession: ZDB-GENE-050522-113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000075223	Ribosomal_L28	PF00830.19	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000080777	-	1262	-	ENSDARP00000075223	252 (aa)	-	F1RDR5

Gene Model

Click here to download ENSDARG00000057805's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000057805's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000057805	mrpl28	100	67.460	ENSG00000086504	MRPL28	100	70.183	Homo_sapiens
ENSDARG00000057805	mrpl28	100	76.190	ENSAPOG00000016883	mrpl28	100	76.190	Acanthochromis_polyacanthus
ENSDARG00000057805	mrpl28	100	66.667	ENSAMEG00000007031	MRPL28	98	66.667	Ailuropoda_melanoleuca
ENSDARG00000057805	mrpl28	100	73.810	ENSACIG00000005641	mrpl28	100	73.810	Amphilophus_citrinellus
ENSDARG00000057805	mrpl28	100	73.913	ENSAOCG00000024148	mrpl28	100	73.913	Amphiprion_ocellaris
ENSDARG00000057805	mrpl28	100	73.810	ENSAPEG00000010705	mrpl28	100	73.810	Amphiprion_percula
ENSDARG00000057805	mrpl28	100	73.810	ENSATEG00000013085	mrpl28	100	73.810	Anabas_testudineus
ENSDARG00000057805	mrpl28	55	71.223	ENSAPLG00000006257	MRPL28	99	71.223	Anas_platyrhynchos
ENSDARG00000057805	mrpl28	97	62.891	ENSACAG00000015301	MRPL28	98	62.891	Anolis_carolinensis
ENSDARG00000057805	mrpl28	100	67.460	ENSANAG00000022423	MRPL28	98	67.460	Aotus_nancymaae
ENSDARG00000057805	mrpl28	100	72.619	ENSACLG00000017376	mrpl28	100	72.619	Astatotilapia_calliptera
ENSDARG00000057805	mrpl28	100	79.762	ENSAMXG00000001999	mrpl28	99	79.762	Astyanax_mexicanus
ENSDARG00000057805	mrpl28	100	66.270	ENSBTAG00000016581	MRPL28	92	66.270	Bos_taurus
ENSDARG00000057805	mrpl28	100	62.846	ENSCAFG00000019682	MRPL28	98	63.636	Canis_familiaris
ENSDARG00000057805	mrpl28	100	63.889	ENSCAFG00020009225	MRPL28	98	64.286	Canis_lupus_dingo
ENSDARG00000057805	mrpl28	100	65.476	ENSCHIG00000016968	MRPL28	98	65.476	Capra_hircus
ENSDARG00000057805	mrpl28	90	65.487	ENSTSYG00000032509	MRPL28	93	65.487	Carlito_syrichta
ENSDARG00000057805	mrpl28	62	69.231	ENSCAPG00000011681	MRPL28	96	69.231	Cavia_aperea
ENSDARG00000057805	mrpl28	100	67.063	ENSCPOG00000007176	MRPL28	98	67.063	Cavia_porcellus
ENSDARG00000057805	mrpl28	99	66.932	ENSCCAG00000030887	MRPL28	98	66.932	Cebus_capucinus
ENSDARG00000057805	mrpl28	98	69.758	ENSCATG00000040016	MRPL28	97	69.758	Cercocebus_atys
ENSDARG00000057805	mrpl28	100	67.857	ENSCLAG00000014858	MRPL28	98	67.857	Chinchilla_lanigera
ENSDARG00000057805	mrpl28	100	69.048	ENSCSAG00000012838	MRPL28	98	69.048	Chlorocebus_sabaeus
ENSDARG00000057805	mrpl28	99	75.697	ENSCPBG00000026390	MRPL28	99	75.697	Chrysemys_picta_bellii
ENSDARG00000057805	mrpl28	95	44.130	ENSCING00000023726	-	93	44.130	Ciona_intestinalis
ENSDARG00000057805	mrpl28	90	43.038	ENSCSAVG00000003761	-	84	43.038	Ciona_savignyi
ENSDARG00000057805	mrpl28	100	68.651	ENSCANG00000033941	MRPL28	98	68.651	Colobus_angolensis_palliatus
ENSDARG00000057805	mrpl28	100	69.444	ENSCGRG00001012825	Mrpl28	98	69.444	Cricetulus_griseus_chok1gshd
ENSDARG00000057805	mrpl28	100	69.444	ENSCGRG00000014549	Mrpl28	98	69.444	Cricetulus_griseus_crigri
ENSDARG00000057805	mrpl28	100	72.222	ENSCSEG00000008095	mrpl28	100	72.222	Cynoglossus_semilaevis
ENSDARG00000057805	mrpl28	100	74.603	ENSCVAG00000005123	mrpl28	100	74.603	Cyprinodon_variegatus
ENSDARG00000057805	mrpl28	62	69.677	ENSDORG00000024147	Mrpl28	97	69.677	Dipodomys_ordii
ENSDARG00000057805	mrpl28	97	65.447	ENSEBUG00000004106	mrpl28	98	65.447	Eptatretus_burgeri
ENSDARG00000057805	mrpl28	99	66.667	ENSEASG00005018175	MRPL28	97	66.667	Equus_asinus_asinus
ENSDARG00000057805	mrpl28	99	66.265	ENSECAG00000022663	MRPL28	97	66.265	Equus_caballus
ENSDARG00000057805	mrpl28	99	66.265	ENSEEUG00000006626	MRPL28	90	66.265	Erinaceus_europaeus
ENSDARG00000057805	mrpl28	100	78.968	ENSELUG00000014104	mrpl28	100	78.968	Esox_lucius
ENSDARG00000057805	mrpl28	100	63.889	ENSFCAG00000041050	MRPL28	98	63.889	Felis_catus
ENSDARG00000057805	mrpl28	57	72.727	ENSFALG00000004103	MRPL28	93	72.727	Ficedula_albicollis
ENSDARG00000057805	mrpl28	100	66.667	ENSFDAG00000011002	MRPL28	98	66.667	Fukomys_damarensis
ENSDARG00000057805	mrpl28	100	74.308	ENSFHEG00000006545	mrpl28	100	74.308	Fundulus_heteroclitus
ENSDARG00000057805	mrpl28	100	71.032	ENSGMOG00000010597	mrpl28	98	71.032	Gadus_morhua
ENSDARG00000057805	mrpl28	98	65.737	ENSGALG00000007473	MRPL28	100	65.737	Gallus_gallus
ENSDARG00000057805	mrpl28	99	74.502	ENSGAFG00000012123	mrpl28	99	74.502	Gambusia_affinis
ENSDARG00000057805	mrpl28	100	72.222	ENSGACG00000009641	mrpl28	98	72.222	Gasterosteus_aculeatus
ENSDARG00000057805	mrpl28	99	74.502	ENSGAGG00000023391	MRPL28	99	74.502	Gopherus_agassizii
ENSDARG00000057805	mrpl28	100	67.857	ENSGGOG00000006668	MRPL28	98	67.857	Gorilla_gorilla
ENSDARG00000057805	mrpl28	88	75.113	ENSHBUG00000002357	mrpl28	94	75.113	Haplochromis_burtoni
ENSDARG00000057805	mrpl28	100	68.254	ENSHGLG00000003807	MRPL28	98	68.254	Heterocephalus_glaber_female
ENSDARG00000057805	mrpl28	100	68.254	ENSHGLG00100012704	MRPL28	98	68.254	Heterocephalus_glaber_male
ENSDARG00000057805	mrpl28	100	72.619	ENSHCOG00000000219	mrpl28	100	72.619	Hippocampus_comes
ENSDARG00000057805	mrpl28	100	82.937	ENSIPUG00000015984	mrpl28	99	82.937	Ictalurus_punctatus
ENSDARG00000057805	mrpl28	100	65.873	ENSSTOG00000012316	MRPL28	97	65.873	Ictidomys_tridecemlineatus
ENSDARG00000057805	mrpl28	100	66.667	ENSJJAG00000008947	Mrpl28	98	66.667	Jaculus_jaculus
ENSDARG00000057805	mrpl28	100	73.413	ENSKMAG00000021277	mrpl28	100	73.413	Kryptolebias_marmoratus
ENSDARG00000057805	mrpl28	100	70.588	ENSLBEG00000020499	mrpl28	100	70.588	Labrus_bergylta
ENSDARG00000057805	mrpl28	100	59.091	ENSLACG00000009989	MRPL28	99	59.091	Latimeria_chalumnae
ENSDARG00000057805	mrpl28	100	76.984	ENSLOCG00000014850	mrpl28	99	76.984	Lepisosteus_oculatus
ENSDARG00000057805	mrpl28	100	66.270	ENSLAFG00000010776	MRPL28	99	66.270	Loxodonta_africana
ENSDARG00000057805	mrpl28	100	69.841	ENSMFAG00000006698	MRPL28	98	69.841	Macaca_fascicularis
ENSDARG00000057805	mrpl28	100	69.444	ENSMMUG00000000609	MRPL28	98	69.444	Macaca_mulatta
ENSDARG00000057805	mrpl28	99	70.120	ENSMNEG00000027279	MRPL28	98	70.120	Macaca_nemestrina
ENSDARG00000057805	mrpl28	100	69.841	ENSMLEG00000002439	MRPL28	98	69.841	Mandrillus_leucophaeus
ENSDARG00000057805	mrpl28	100	73.810	ENSMAMG00000011487	mrpl28	100	73.810	Mastacembelus_armatus
ENSDARG00000057805	mrpl28	100	72.619	ENSMZEG00005016524	mrpl28	100	72.619	Maylandia_zebra
ENSDARG00000057805	mrpl28	100	68.651	ENSMAUG00000003487	Mrpl28	98	68.651	Mesocricetus_auratus
ENSDARG00000057805	mrpl28	100	67.460	ENSMICG00000031344	MRPL28	98	67.460	Microcebus_murinus
ENSDARG00000057805	mrpl28	100	68.254	ENSMOCG00000014836	Mrpl28	98	68.254	Microtus_ochrogaster
ENSDARG00000057805	mrpl28	100	75.000	ENSMMOG00000012412	mrpl28	100	75.000	Mola_mola
ENSDARG00000057805	mrpl28	100	68.254	ENSMODG00000016666	MRPL28	99	68.254	Monodelphis_domestica
ENSDARG00000057805	mrpl28	99	73.307	ENSMALG00000011904	mrpl28	100	73.307	Monopterus_albus
ENSDARG00000057805	mrpl28	100	67.460	MGP_CAROLIEiJ_G0021273	Mrpl28	98	67.460	Mus_caroli
ENSDARG00000057805	mrpl28	100	67.460	ENSMUSG00000024181	Mrpl28	98	67.460	Mus_musculus
ENSDARG00000057805	mrpl28	99	66.932	MGP_PahariEiJ_G0023591	Mrpl28	98	66.932	Mus_pahari
ENSDARG00000057805	mrpl28	100	67.460	MGP_SPRETEiJ_G0022184	Mrpl28	98	67.460	Mus_spretus
ENSDARG00000057805	mrpl28	100	66.270	ENSMPUG00000016020	MRPL28	98	66.270	Mustela_putorius_furo
ENSDARG00000057805	mrpl28	100	67.460	ENSMLUG00000010009	MRPL28	98	67.460	Myotis_lucifugus
ENSDARG00000057805	mrpl28	88	71.041	ENSNGAG00000016312	Mrpl28	95	71.041	Nannospalax_galili
ENSDARG00000057805	mrpl28	100	73.016	ENSNBRG00000005544	mrpl28	100	73.016	Neolamprologus_brichardi
ENSDARG00000057805	mrpl28	100	68.254	ENSNLEG00000031011	MRPL28	98	68.254	Nomascus_leucogenys
ENSDARG00000057805	mrpl28	100	68.254	ENSMEUG00000000407	MRPL28	98	68.254	Notamacropus_eugenii
ENSDARG00000057805	mrpl28	100	67.460	ENSODEG00000015538	MRPL28	98	67.460	Octodon_degus
ENSDARG00000057805	mrpl28	100	73.810	ENSONIG00000005965	mrpl28	100	73.810	Oreochromis_niloticus
ENSDARG00000057805	mrpl28	100	75.794	ENSORLG00000006806	mrpl28	100	75.794	Oryzias_latipes
ENSDARG00000057805	mrpl28	100	75.794	ENSORLG00020002937	mrpl28	100	75.794	Oryzias_latipes_hni
ENSDARG00000057805	mrpl28	100	75.794	ENSORLG00015005123	mrpl28	100	75.794	Oryzias_latipes_hsok
ENSDARG00000057805	mrpl28	100	74.206	ENSOMEG00000013553	mrpl28	100	74.206	Oryzias_melastigma
ENSDARG00000057805	mrpl28	98	66.935	ENSOGAG00000014941	MRPL28	97	66.935	Otolemur_garnettii
ENSDARG00000057805	mrpl28	100	65.476	ENSOARG00000011786	MRPL28	98	65.476	Ovis_aries
ENSDARG00000057805	mrpl28	100	67.460	ENSPPAG00000034473	MRPL28	98	67.460	Pan_paniscus
ENSDARG00000057805	mrpl28	100	64.286	ENSPPRG00000002937	MRPL28	98	64.286	Panthera_pardus
ENSDARG00000057805	mrpl28	100	64.286	ENSPTIG00000017626	MRPL28	98	64.286	Panthera_tigris_altaica
ENSDARG00000057805	mrpl28	100	67.460	ENSPTRG00000047553	MRPL28	98	67.460	Pan_troglodytes
ENSDARG00000057805	mrpl28	100	69.444	ENSPANG00000018773	MRPL28	98	69.444	Papio_anubis
ENSDARG00000057805	mrpl28	99	76.892	ENSPKIG00000010370	mrpl28	100	76.892	Paramormyrops_kingsleyae
ENSDARG00000057805	mrpl28	95	73.640	ENSPSIG00000011177	MRPL28	98	73.640	Pelodiscus_sinensis
ENSDARG00000057805	mrpl28	99	75.299	ENSPMGG00000014190	mrpl28	99	75.299	Periophthalmus_magnuspinnatus
ENSDARG00000057805	mrpl28	100	68.651	ENSPEMG00000019054	Mrpl28	98	68.651	Peromyscus_maniculatus_bairdii
ENSDARG00000057805	mrpl28	100	66.008	ENSPMAG00000004202	mrpl28	98	66.008	Petromyzon_marinus
ENSDARG00000057805	mrpl28	100	68.254	ENSPCIG00000000377	MRPL28	88	68.254	Phascolarctos_cinereus
ENSDARG00000057805	mrpl28	100	74.603	ENSPFOG00000009485	mrpl28	100	74.603	Poecilia_formosa
ENSDARG00000057805	mrpl28	100	74.603	ENSPLAG00000020059	mrpl28	100	74.603	Poecilia_latipinna
ENSDARG00000057805	mrpl28	100	75.000	ENSPMEG00000012919	mrpl28	100	75.000	Poecilia_mexicana
ENSDARG00000057805	mrpl28	100	73.016	ENSPREG00000022968	mrpl28	100	73.016	Poecilia_reticulata
ENSDARG00000057805	mrpl28	88	70.588	ENSPPYG00000006906	MRPL28	100	70.588	Pongo_abelii
ENSDARG00000057805	mrpl28	100	68.651	ENSPCAG00000011480	MRPL28	98	68.651	Procavia_capensis
ENSDARG00000057805	mrpl28	100	66.667	ENSPCOG00000021895	MRPL28	98	66.667	Propithecus_coquereli
ENSDARG00000057805	mrpl28	100	57.540	ENSPVAG00000000551	MRPL28	98	57.540	Pteropus_vampyrus
ENSDARG00000057805	mrpl28	88	75.566	ENSPNYG00000005347	mrpl28	94	75.566	Pundamilia_nyererei
ENSDARG00000057805	mrpl28	100	79.762	ENSPNAG00000009296	mrpl28	99	79.762	Pygocentrus_nattereri
ENSDARG00000057805	mrpl28	100	66.667	ENSRNOG00000042720	Mrpl28	98	66.667	Rattus_norvegicus
ENSDARG00000057805	mrpl28	100	68.651	ENSRBIG00000029953	MRPL28	98	68.651	Rhinopithecus_bieti
ENSDARG00000057805	mrpl28	100	68.254	ENSRROG00000042756	MRPL28	98	68.254	Rhinopithecus_roxellana
ENSDARG00000057805	mrpl28	99	67.068	ENSSBOG00000019789	MRPL28	98	67.068	Saimiri_boliviensis_boliviensis
ENSDARG00000057805	mrpl28	100	69.048	ENSSHAG00000007606	MRPL28	99	69.048	Sarcophilus_harrisii
ENSDARG00000057805	mrpl28	100	78.968	ENSSFOG00015006866	mrpl28	100	78.968	Scleropages_formosus
ENSDARG00000057805	mrpl28	100	73.413	ENSSMAG00000013912	mrpl28	100	73.413	Scophthalmus_maximus
ENSDARG00000057805	mrpl28	100	73.016	ENSSDUG00000005764	mrpl28	100	73.016	Seriola_dumerili
ENSDARG00000057805	mrpl28	99	72.510	ENSSLDG00000000409	mrpl28	99	72.510	Seriola_lalandi_dorsalis
ENSDARG00000057805	mrpl28	59	66.892	ENSSARG00000006277	-	98	66.892	Sorex_araneus
ENSDARG00000057805	mrpl28	97	72.245	ENSSPUG00000015322	MRPL28	98	72.245	Sphenodon_punctatus
ENSDARG00000057805	mrpl28	100	71.825	ENSSPAG00000011153	mrpl28	100	71.825	Stegastes_partitus
ENSDARG00000057805	mrpl28	100	66.270	ENSSSCG00000007984	MRPL28	98	66.270	Sus_scrofa
ENSDARG00000057805	mrpl28	100	72.619	ENSTRUG00000019877	mrpl28	100	72.619	Takifugu_rubripes
ENSDARG00000057805	mrpl28	94	64.286	ENSTNIG00000002347	-	100	64.286	Tetraodon_nigroviridis
ENSDARG00000057805	mrpl28	100	74.206	ENSTNIG00000007746	mrpl28	100	74.206	Tetraodon_nigroviridis
ENSDARG00000057805	mrpl28	50	73.600	ENSTTRG00000009128	-	78	73.600	Tursiops_truncatus
ENSDARG00000057805	mrpl28	100	66.667	ENSUAMG00000015724	MRPL28	94	66.667	Ursus_americanus
ENSDARG00000057805	mrpl28	100	66.270	ENSUMAG00000021029	MRPL28	98	66.270	Ursus_maritimus
ENSDARG00000057805	mrpl28	61	60.234	ENSVVUG00000013414	MRPL28	61	60.234	Vulpes_vulpes
ENSDARG00000057805	mrpl28	100	66.270	ENSXETG00000011564	mrpl28	99	66.270	Xenopus_tropicalis
ENSDARG00000057805	mrpl28	100	72.619	ENSXCOG00000012655	mrpl28	100	72.619	Xiphophorus_couchianus
ENSDARG00000057805	mrpl28	100	72.619	ENSXMAG00000004293	mrpl28	100	72.619	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005840	ribosome	-	IEA	Component