EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000057879 (Gene tree)
Gene ID: 553311
Gene Symbol: p3h3
Alias: leprel2|si:ch211-69g19.4
Full Name: prolyl 3-hydroxylase 3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 14331 bases
Position: chr16:11992498-12006828
Accession: ZDB-GENE-060503-231
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000120912	2OG-FeII_Oxy	PF03171.20	4.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000143442	-	2536	XM_691174	ENSDARP00000120912	731 (aa)	XP_696266	F1QB32

Gene Model

Click here to download ENSDARG00000057879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000057879's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000057879	p3h3	93	38.630	ENSDARG00000103026	p3h2	98	40.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000057879	p3h3	79	45.763	ENSAMEG00000014022	P3H3	95	45.167	Ailuropoda_melanoleuca
ENSDARG00000057879	p3h3	100	65.989	ENSACIG00000012960	p3h3	100	65.854	Amphilophus_citrinellus
ENSDARG00000057879	p3h3	77	46.154	ENSAPLG00000002993	P3H3	89	46.154	Anas_platyrhynchos
ENSDARG00000057879	p3h3	89	46.083	ENSACAG00000005838	P3H3	87	46.071	Anolis_carolinensis
ENSDARG00000057879	p3h3	79	45.671	ENSANAG00000027222	P3H3	95	41.643	Aotus_nancymaae
ENSDARG00000057879	p3h3	100	66.667	ENSACLG00000024992	p3h3	100	66.486	Astatotilapia_calliptera
ENSDARG00000057879	p3h3	92	74.851	ENSAMXG00000019026	p3h3	91	76.599	Astyanax_mexicanus
ENSDARG00000057879	p3h3	93	43.146	ENSBTAG00000003598	P3H3	92	43.660	Bos_taurus
ENSDARG00000057879	p3h3	88	42.986	ENSCJAG00000007528	P3H3	88	42.964	Callithrix_jacchus
ENSDARG00000057879	p3h3	88	43.563	ENSCAFG00000031318	P3H3	89	43.713	Canis_familiaris
ENSDARG00000057879	p3h3	88	43.825	ENSCAFG00020003004	P3H3	88	43.976	Canis_lupus_dingo
ENSDARG00000057879	p3h3	88	43.570	ENSCHIG00000000989	P3H3	89	44.109	Capra_hircus
ENSDARG00000057879	p3h3	65	46.392	ENSTSYG00000037231	P3H3	86	46.392	Carlito_syrichta
ENSDARG00000057879	p3h3	69	42.885	ENSCAPG00000003726	P3H3	95	41.929	Cavia_aperea
ENSDARG00000057879	p3h3	79	45.331	ENSCPOG00000012330	P3H3	93	41.311	Cavia_porcellus
ENSDARG00000057879	p3h3	88	42.986	ENSCCAG00000024330	P3H3	89	42.964	Cebus_capucinus
ENSDARG00000057879	p3h3	88	43.051	ENSCATG00000040167	P3H3	89	43.178	Cercocebus_atys
ENSDARG00000057879	p3h3	76	44.710	ENSCLAG00000012569	P3H3	89	44.974	Chinchilla_lanigera
ENSDARG00000057879	p3h3	88	43.051	ENSCSAG00000010242	P3H3	78	43.178	Chlorocebus_sabaeus
ENSDARG00000057879	p3h3	78	46.114	ENSCANG00000024892	P3H3	88	46.233	Colobus_angolensis_palliatus
ENSDARG00000057879	p3h3	88	43.836	ENSCGRG00001000528	P3h3	91	42.920	Cricetulus_griseus_chok1gshd
ENSDARG00000057879	p3h3	69	44.990	ENSCGRG00000018317	P3h3	95	43.774	Cricetulus_griseus_crigri
ENSDARG00000057879	p3h3	100	64.946	ENSCVAG00000000837	p3h3	100	64.674	Cyprinodon_variegatus
ENSDARG00000057879	p3h3	88	41.988	ENSDNOG00000036097	P3H3	89	42.012	Dasypus_novemcinctus
ENSDARG00000057879	p3h3	60	59.000	ENSDORG00000011727	P3h3	90	58.621	Dipodomys_ordii
ENSDARG00000057879	p3h3	58	54.098	ENSETEG00000007557	P3H3	80	54.098	Echinops_telfairi
ENSDARG00000057879	p3h3	100	68.011	ENSELUG00000019105	p3h3	100	67.596	Esox_lucius
ENSDARG00000057879	p3h3	88	43.590	ENSFCAG00000004270	P3H3	88	43.741	Felis_catus
ENSDARG00000057879	p3h3	72	48.393	ENSFALG00000004696	P3H3	94	46.290	Ficedula_albicollis
ENSDARG00000057879	p3h3	100	66.351	ENSFHEG00000011860	p3h3	100	66.081	Fundulus_heteroclitus
ENSDARG00000057879	p3h3	100	65.765	ENSGAFG00000014501	p3h3	100	65.447	Gambusia_affinis
ENSDARG00000057879	p3h3	97	62.309	ENSGACG00000009861	p3h3	95	63.728	Gasterosteus_aculeatus
ENSDARG00000057879	p3h3	100	66.802	ENSHBUG00000016431	p3h3	100	66.621	Haplochromis_burtoni
ENSDARG00000057879	p3h3	99	72.865	ENSIPUG00000006593	p3h3	99	73.066	Ictalurus_punctatus
ENSDARG00000057879	p3h3	88	43.854	ENSSTOG00000015582	P3H3	89	43.976	Ictidomys_tridecemlineatus
ENSDARG00000057879	p3h3	69	45.543	ENSJJAG00000002354	P3h3	91	45.793	Jaculus_jaculus
ENSDARG00000057879	p3h3	100	65.452	ENSKMAG00000008742	p3h3	100	65.312	Kryptolebias_marmoratus
ENSDARG00000057879	p3h3	100	66.395	ENSLBEG00000011556	p3h3	100	66.395	Labrus_bergylta
ENSDARG00000057879	p3h3	89	64.580	ENSLOCG00000007785	p3h3	84	65.367	Lepisosteus_oculatus
ENSDARG00000057879	p3h3	79	47.039	ENSLAFG00000006551	P3H3	89	44.360	Loxodonta_africana
ENSDARG00000057879	p3h3	88	43.202	ENSMFAG00000046290	P3H3	89	43.178	Macaca_fascicularis
ENSDARG00000057879	p3h3	88	43.202	ENSMMUG00000005189	P3H3	89	43.178	Macaca_mulatta
ENSDARG00000057879	p3h3	88	43.202	ENSMNEG00000028584	P3H3	89	43.178	Macaca_nemestrina
ENSDARG00000057879	p3h3	76	46.333	ENSMLEG00000013218	P3H3	94	44.857	Mandrillus_leucophaeus
ENSDARG00000057879	p3h3	100	67.751	ENSMAMG00000003306	p3h3	100	67.619	Mastacembelus_armatus
ENSDARG00000057879	p3h3	100	66.396	ENSMZEG00005017868	p3h3	100	66.214	Maylandia_zebra
ENSDARG00000057879	p3h3	72	46.972	ENSMGAG00000014116	P3H3	96	46.972	Meleagris_gallopavo
ENSDARG00000057879	p3h3	88	43.683	ENSMAUG00000019245	P3h3	91	42.984	Mesocricetus_auratus
ENSDARG00000057879	p3h3	78	46.367	ENSMICG00000042131	P3H3	95	42.514	Microcebus_murinus
ENSDARG00000057879	p3h3	88	42.770	ENSMOCG00000014085	P3h3	88	42.749	Microtus_ochrogaster
ENSDARG00000057879	p3h3	100	66.621	ENSMMOG00000015930	p3h3	100	66.531	Mola_mola
ENSDARG00000057879	p3h3	88	43.524	ENSMODG00000018141	P3H3	89	43.825	Monodelphis_domestica
ENSDARG00000057879	p3h3	88	43.140	ENSMUSG00000023191	P3h3	88	43.116	Mus_musculus
ENSDARG00000057879	p3h3	88	43.750	MGP_PahariEiJ_G0022617	P3h3	95	41.808	Mus_pahari
ENSDARG00000057879	p3h3	88	43.140	MGP_SPRETEiJ_G0029899	P3h3	88	43.116	Mus_spretus
ENSDARG00000057879	p3h3	88	43.958	ENSMPUG00000016793	P3H3	89	44.060	Mustela_putorius_furo
ENSDARG00000057879	p3h3	72	46.442	ENSMLUG00000006754	P3H3	91	46.642	Myotis_lucifugus
ENSDARG00000057879	p3h3	88	43.531	ENSNGAG00000015076	P3h3	88	43.531	Nannospalax_galili
ENSDARG00000057879	p3h3	100	66.667	ENSNBRG00000021250	p3h3	100	66.621	Neolamprologus_brichardi
ENSDARG00000057879	p3h3	74	50.556	ENSMEUG00000011534	P3H3	78	50.276	Notamacropus_eugenii
ENSDARG00000057879	p3h3	76	45.907	ENSODEG00000003441	P3H3	85	46.299	Octodon_degus
ENSDARG00000057879	p3h3	100	66.306	ENSONIG00000013004	p3h3	100	66.486	Oreochromis_niloticus
ENSDARG00000057879	p3h3	100	67.255	ENSORLG00000012703	p3h3	100	66.984	Oryzias_latipes
ENSDARG00000057879	p3h3	100	67.120	ENSORLG00020000081	p3h3	100	67.030	Oryzias_latipes_hni
ENSDARG00000057879	p3h3	100	67.120	ENSORLG00015009894	p3h3	100	66.848	Oryzias_latipes_hsok
ENSDARG00000057879	p3h3	99	67.755	ENSOMEG00000014020	p3h3	99	67.755	Oryzias_melastigma
ENSDARG00000057879	p3h3	88	43.524	ENSOGAG00000003025	P3H3	88	43.348	Otolemur_garnettii
ENSDARG00000057879	p3h3	88	43.590	ENSPPRG00000012543	P3H3	88	43.741	Panthera_pardus
ENSDARG00000057879	p3h3	73	46.055	ENSPTIG00000003404	P3H3	87	46.239	Panthera_tigris_altaica
ENSDARG00000057879	p3h3	88	42.900	ENSPANG00000020167	P3H3	89	43.028	Papio_anubis
ENSDARG00000057879	p3h3	100	66.621	ENSPKIG00000009290	p3h3	89	66.259	Paramormyrops_kingsleyae
ENSDARG00000057879	p3h3	95	65.379	ENSPMGG00000006211	p3h3	99	65.379	Periophthalmus_magnuspinnatus
ENSDARG00000057879	p3h3	88	43.578	ENSPEMG00000011450	P3h3	90	42.582	Peromyscus_maniculatus_bairdii
ENSDARG00000057879	p3h3	91	43.878	ENSPCIG00000002057	P3H3	93	43.634	Phascolarctos_cinereus
ENSDARG00000057879	p3h3	98	65.205	ENSPFOG00000015007	p3h3	96	67.525	Poecilia_formosa
ENSDARG00000057879	p3h3	100	65.811	ENSPLAG00000003547	p3h3	100	65.676	Poecilia_latipinna
ENSDARG00000057879	p3h3	100	65.854	ENSPMEG00000017116	p3h3	97	65.718	Poecilia_mexicana
ENSDARG00000057879	p3h3	100	65.405	ENSPREG00000012490	p3h3	100	65.135	Poecilia_reticulata
ENSDARG00000057879	p3h3	88	43.570	ENSPCOG00000024751	P3H3	88	43.413	Propithecus_coquereli
ENSDARG00000057879	p3h3	88	43.268	ENSPVAG00000012303	P3H3	89	43.419	Pteropus_vampyrus
ENSDARG00000057879	p3h3	100	66.531	ENSPNYG00000022876	p3h3	100	66.350	Pundamilia_nyererei
ENSDARG00000057879	p3h3	99	74.014	ENSPNAG00000020094	p3h3	97	76.801	Pygocentrus_nattereri
ENSDARG00000057879	p3h3	69	45.383	ENSRNOG00000016071	P3h3	91	45.490	Rattus_norvegicus
ENSDARG00000057879	p3h3	88	43.051	ENSRBIG00000034982	P3H3	89	43.178	Rhinopithecus_bieti
ENSDARG00000057879	p3h3	79	45.424	ENSRROG00000030746	P3H3	87	45.546	Rhinopithecus_roxellana
ENSDARG00000057879	p3h3	77	46.087	ENSSBOG00000027303	P3H3	92	43.662	Saimiri_boliviensis_boliviensis
ENSDARG00000057879	p3h3	98	68.201	ENSSFOG00015013557	p3h3	93	69.164	Scleropages_formosus
ENSDARG00000057879	p3h3	100	67.699	ENSSMAG00000010443	p3h3	100	67.480	Scophthalmus_maximus
ENSDARG00000057879	p3h3	100	68.293	ENSSDUG00000013324	p3h3	100	68.478	Seriola_dumerili
ENSDARG00000057879	p3h3	94	67.388	ENSSLDG00000024153	p3h3	98	67.388	Seriola_lalandi_dorsalis
ENSDARG00000057879	p3h3	98	64.804	ENSSPAG00000009922	p3h3	100	64.578	Stegastes_partitus
ENSDARG00000057879	p3h3	93	42.775	ENSSSCG00000000681	P3H3	94	42.775	Sus_scrofa
ENSDARG00000057879	p3h3	91	42.478	ENSTTRG00000004668	P3H3	91	42.460	Tursiops_truncatus
ENSDARG00000057879	p3h3	73	46.310	ENSUAMG00000026859	P3H3	94	41.477	Ursus_americanus
ENSDARG00000057879	p3h3	78	46.299	ENSVVUG00000011231	P3H3	76	46.299	Vulpes_vulpes
ENSDARG00000057879	p3h3	74	42.596	ENSXETG00000011541	p3h3	91	38.685	Xenopus_tropicalis
ENSDARG00000057879	p3h3	100	65.541	ENSXCOG00000019204	p3h3	100	65.223	Xiphophorus_couchianus
ENSDARG00000057879	p3h3	100	65.541	ENSXMAG00000011089	p3h3	97	65.223	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005506	iron ion binding	-	IEA	Function
GO:0005783	endoplasmic reticulum	21873635.	IBA	Component
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	-	IEA	Function
GO:0019797	procollagen-proline 3-dioxygenase activity	21873635.	IBA	Function
GO:0031418	L-ascorbic acid binding	-	IEA	Function
GO:0032963	collagen metabolic process	21873635.	IBA	Process
GO:0032963	collagen metabolic process	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process