EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000058448 (Gene tree)
Gene ID: 100005490
Gene Symbol: zrsr2
Alias: fb73a09|wu:fb73a09
Full Name: zinc finger (CCCH type)%2C RNA-binding motif and serine/arginine rich 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 11836 bases
Position: chr11:12732247-12744082
Accession: ZDB-GENE-030131-1495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000152352	zf-CCCH	PF00642.24	1.8e-12	1	2
ENSDARP00000152352	zf-CCCH	PF00642.24	1.8e-12	2	2
ENSDARP00000075762	zf-CCCH	PF00642.24	3.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000154165	-	717	-	-	- (aa)	-	-
ENSDART00000081319	-	3061	XM_001920527	ENSDARP00000075762	635 (aa)	XP_001920562	E7F2A1
ENSDART00000156840	-	885	-	-	- (aa)	-	-
ENSDART00000185808	-	2318	XM_021479949	ENSDARP00000152352	483 (aa)	XP_021335624	A0A2R8QJ94

Gene Model

Click here to download ENSDARG00000058448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000058448's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000058448	zrsr2	65	60.000	ENSG00000169249	ZRSR2	73	65.352	Homo_sapiens
ENSDARG00000058448	zrsr2	61	60.459	ENSAPOG00000004712	zrsr2	78	70.476	Acanthochromis_polyacanthus
ENSDARG00000058448	zrsr2	53	66.472	ENSAMEG00000017716	ZRSR2	72	65.306	Ailuropoda_melanoleuca
ENSDARG00000058448	zrsr2	82	53.676	ENSACIG00000004601	zrsr2	70	64.722	Amphilophus_citrinellus
ENSDARG00000058448	zrsr2	57	67.553	ENSATEG00000016753	zrsr2	60	68.478	Anabas_testudineus
ENSDARG00000058448	zrsr2	71	59.161	ENSACAG00000017034	ZRSR2	75	70.435	Anolis_carolinensis
ENSDARG00000058448	zrsr2	64	59.856	ENSANAG00000019297	ZRSR2	75	65.352	Aotus_nancymaae
ENSDARG00000058448	zrsr2	66	62.791	ENSACLG00000019635	zrsr2	69	67.486	Astatotilapia_calliptera
ENSDARG00000058448	zrsr2	51	83.673	ENSAMXG00000018502	zrsr2	59	76.882	Astyanax_mexicanus
ENSDARG00000058448	zrsr2	50	31.120	ENSAMXG00000034836	u2af1	80	34.536	Astyanax_mexicanus
ENSDARG00000058448	zrsr2	64	60.096	ENSCJAG00000047941	ZRSR2	75	65.634	Callithrix_jacchus
ENSDARG00000058448	zrsr2	66	59.765	ENSCAFG00000012201	ZRSR2	75	67.251	Canis_familiaris
ENSDARG00000058448	zrsr2	62	52.273	ENSCAFG00020016674	-	81	53.383	Canis_lupus_dingo
ENSDARG00000058448	zrsr2	57	61.232	ENSCHIG00000023069	-	77	65.424	Capra_hircus
ENSDARG00000058448	zrsr2	54	57.746	ENSTSYG00000005278	-	62	68.473	Carlito_syrichta
ENSDARG00000058448	zrsr2	65	58.491	ENSCPOG00000004227	ZRSR2	76	66.176	Cavia_porcellus
ENSDARG00000058448	zrsr2	64	59.856	ENSCCAG00000023937	ZRSR2	75	65.352	Cebus_capucinus
ENSDARG00000058448	zrsr2	65	59.529	ENSCATG00000034085	ZRSR2	73	65.352	Cercocebus_atys
ENSDARG00000058448	zrsr2	65	58.294	ENSCATG00000020687	-	73	64.067	Cercocebus_atys
ENSDARG00000058448	zrsr2	65	59.251	ENSCSAG00000014897	ZRSR2	74	64.986	Chlorocebus_sabaeus
ENSDARG00000058448	zrsr2	59	63.574	ENSCANG00000030333	ZRSR2	73	59.718	Colobus_angolensis_palliatus
ENSDARG00000058448	zrsr2	64	58.645	ENSCGRG00001006948	-	66	68.437	Cricetulus_griseus_chok1gshd
ENSDARG00000058448	zrsr2	67	58.216	ENSCGRG00001007132	Zrsr1	80	64.655	Cricetulus_griseus_chok1gshd
ENSDARG00000058448	zrsr2	64	58.491	ENSCGRG00000009725	-	71	67.638	Cricetulus_griseus_crigri
ENSDARG00000058448	zrsr2	67	58.216	ENSCGRG00000019269	Zrsr1	80	64.655	Cricetulus_griseus_crigri
ENSDARG00000058448	zrsr2	73	58.447	ENSCSEG00000009682	zrsr2	64	70.968	Cynoglossus_semilaevis
ENSDARG00000058448	zrsr2	54	67.919	ENSCVAG00000020877	zrsr2	66	65.591	Cyprinodon_variegatus
ENSDARG00000058448	zrsr2	53	67.941	ENSDNOG00000015008	ZRSR2	71	65.449	Dasypus_novemcinctus
ENSDARG00000058448	zrsr2	53	63.205	ENSETEG00000005141	-	73	63.205	Echinops_telfairi
ENSDARG00000058448	zrsr2	53	68.513	ENSEEUG00000002115	ZRSR2	72	68.513	Erinaceus_europaeus
ENSDARG00000058448	zrsr2	53	67.353	ENSFCAG00000009333	-	73	67.353	Felis_catus
ENSDARG00000058448	zrsr2	64	58.454	ENSFCAG00000025255	-	70	64.809	Felis_catus
ENSDARG00000058448	zrsr2	55	66.197	ENSFALG00000004373	ZRSR2	86	61.743	Ficedula_albicollis
ENSDARG00000058448	zrsr2	57	64.658	ENSFDAG00000011766	ZRSR2	76	64.286	Fukomys_damarensis
ENSDARG00000058448	zrsr2	54	68.376	ENSFHEG00000006093	zrsr2	63	66.048	Fundulus_heteroclitus
ENSDARG00000058448	zrsr2	52	60.694	ENSGMOG00000008189	zrsr2	68	60.684	Gadus_morhua
ENSDARG00000058448	zrsr2	52	71.484	ENSGACG00000015069	zrsr2	65	63.130	Gasterosteus_aculeatus
ENSDARG00000058448	zrsr2	53	62.130	ENSGAGG00000016402	ZRSR2	71	65.089	Gopherus_agassizii
ENSDARG00000058448	zrsr2	65	59.529	ENSGGOG00000011962	ZRSR2	74	65.352	Gorilla_gorilla
ENSDARG00000058448	zrsr2	62	66.585	ENSHBUG00000000797	zrsr2	65	68.783	Haplochromis_burtoni
ENSDARG00000058448	zrsr2	55	65.909	ENSHGLG00000003790	ZRSR2	84	61.697	Heterocephalus_glaber_female
ENSDARG00000058448	zrsr2	55	65.909	ENSHGLG00100010131	ZRSR2	83	61.697	Heterocephalus_glaber_male
ENSDARG00000058448	zrsr2	50	67.611	ENSHCOG00000020661	zrsr2	55	67.427	Hippocampus_comes
ENSDARG00000058448	zrsr2	51	81.557	ENSIPUG00000012642	zrsr2	96	70.745	Ictalurus_punctatus
ENSDARG00000058448	zrsr2	67	59.681	ENSSTOG00000008492	ZRSR2	76	65.642	Ictidomys_tridecemlineatus
ENSDARG00000058448	zrsr2	53	66.276	ENSJJAG00000020365	-	71	66.082	Jaculus_jaculus
ENSDARG00000058448	zrsr2	81	54.808	ENSKMAG00000009969	zrsr2	58	70.145	Kryptolebias_marmoratus
ENSDARG00000058448	zrsr2	52	30.159	ENSLBEG00000024932	-	83	34.872	Labrus_bergylta
ENSDARG00000058448	zrsr2	59	62.269	ENSLBEG00000024627	zrsr2	60	63.611	Labrus_bergylta
ENSDARG00000058448	zrsr2	67	58.998	ENSMFAG00000039674	ZRSR2	74	65.352	Macaca_fascicularis
ENSDARG00000058448	zrsr2	67	58.998	ENSMNEG00000043293	ZRSR2	74	65.352	Macaca_nemestrina
ENSDARG00000058448	zrsr2	65	59.242	ENSMLEG00000028125	ZRSR2	71	64.387	Mandrillus_leucophaeus
ENSDARG00000058448	zrsr2	72	58.887	ENSMAMG00000010779	zrsr2	61	67.905	Mastacembelus_armatus
ENSDARG00000058448	zrsr2	65	65.035	ENSMZEG00005006531	zrsr2	65	67.989	Maylandia_zebra
ENSDARG00000058448	zrsr2	53	67.341	ENSMGAG00000014689	ZRSR2	73	68.497	Meleagris_gallopavo
ENSDARG00000058448	zrsr2	53	68.142	ENSMAUG00000009754	-	74	64.327	Mesocricetus_auratus
ENSDARG00000058448	zrsr2	55	64.972	ENSMICG00000003211	ZRSR2	72	71.678	Microcebus_murinus
ENSDARG00000058448	zrsr2	54	66.189	ENSMOCG00000011340	-	76	66.857	Microtus_ochrogaster
ENSDARG00000058448	zrsr2	56	62.740	ENSMMOG00000018572	zrsr2	80	61.290	Mola_mola
ENSDARG00000058448	zrsr2	61	57.516	MGP_CAROLIEiJ_G0016133	Zrsr1	78	64.307	Mus_caroli
ENSDARG00000058448	zrsr2	63	58.442	ENSMUSG00000044068	Zrsr1	81	63.037	Mus_musculus
ENSDARG00000058448	zrsr2	61	57.516	MGP_PahariEiJ_G0016759	Zrsr1	78	64.307	Mus_pahari
ENSDARG00000058448	zrsr2	63	58.442	MGP_SPRETEiJ_G0016976	Zrsr1	81	63.037	Mus_spretus
ENSDARG00000058448	zrsr2	53	66.082	ENSMPUG00000002739	ZRSR2	77	64.525	Mustela_putorius_furo
ENSDARG00000058448	zrsr2	55	66.011	ENSMLUG00000009780	-	73	66.667	Myotis_lucifugus
ENSDARG00000058448	zrsr2	54	66.762	ENSNGAG00000008809	-	73	67.335	Nannospalax_galili
ENSDARG00000058448	zrsr2	54	62.463	ENSNGAG00000011974	Zrsr1	90	61.877	Nannospalax_galili
ENSDARG00000058448	zrsr2	64	62.500	ENSNBRG00000021146	zrsr2	69	68.033	Neolamprologus_brichardi
ENSDARG00000058448	zrsr2	66	60.284	ENSNLEG00000009496	ZRSR2	74	65.352	Nomascus_leucogenys
ENSDARG00000058448	zrsr2	72	57.204	ENSNLEG00000018892	-	73	64.789	Nomascus_leucogenys
ENSDARG00000058448	zrsr2	55	66.952	ENSODEG00000004944	ZRSR2	73	67.045	Octodon_degus
ENSDARG00000058448	zrsr2	53	70.774	ENSONIG00000000228	zrsr2	74	70.774	Oreochromis_niloticus
ENSDARG00000058448	zrsr2	53	67.155	ENSOANG00000002571	ZRSR2	76	66.197	Ornithorhynchus_anatinus
ENSDARG00000058448	zrsr2	64	60.766	ENSOCUG00000004295	ZRSR2	71	65.915	Oryctolagus_cuniculus
ENSDARG00000058448	zrsr2	53	69.186	ENSORLG00000003476	zrsr2	61	67.218	Oryzias_latipes
ENSDARG00000058448	zrsr2	68	59.132	ENSORLG00020020707	zrsr2	61	66.484	Oryzias_latipes_hni
ENSDARG00000058448	zrsr2	53	69.186	ENSORLG00015019831	zrsr2	61	67.218	Oryzias_latipes_hsok
ENSDARG00000058448	zrsr2	66	59.102	ENSOGAG00000011340	-	80	65.537	Otolemur_garnettii
ENSDARG00000058448	zrsr2	53	65.103	ENSOGAG00000031648	-	71	63.352	Otolemur_garnettii
ENSDARG00000058448	zrsr2	64	61.259	ENSOGAG00000033259	-	72	66.193	Otolemur_garnettii
ENSDARG00000058448	zrsr2	53	66.087	ENSOARG00000012713	ZRSR2	74	66.763	Ovis_aries
ENSDARG00000058448	zrsr2	65	59.765	ENSPPAG00000022429	ZRSR2	74	65.634	Pan_paniscus
ENSDARG00000058448	zrsr2	59	61.741	ENSPPRG00000012485	-	73	65.103	Panthera_pardus
ENSDARG00000058448	zrsr2	53	67.353	ENSPPRG00000016585	-	73	67.353	Panthera_pardus
ENSDARG00000058448	zrsr2	53	67.257	ENSPTIG00000016363	-	73	67.257	Panthera_tigris_altaica
ENSDARG00000058448	zrsr2	72	55.957	ENSPTIG00000006398	-	73	64.809	Panthera_tigris_altaica
ENSDARG00000058448	zrsr2	65	59.529	ENSPTRG00000021693	ZRSR2	74	65.352	Pan_troglodytes
ENSDARG00000058448	zrsr2	50	57.367	ENSPTRG00000045685	-	75	55.486	Pan_troglodytes
ENSDARG00000058448	zrsr2	65	59.529	ENSPANG00000016331	ZRSR2	74	65.352	Papio_anubis
ENSDARG00000058448	zrsr2	65	58.629	ENSPANG00000009346	-	73	64.444	Papio_anubis
ENSDARG00000058448	zrsr2	53	71.642	ENSPSIG00000008915	ZRSR2	71	71.343	Pelodiscus_sinensis
ENSDARG00000058448	zrsr2	68	57.339	ENSPEMG00000013373	Zrsr1	81	64.589	Peromyscus_maniculatus_bairdii
ENSDARG00000058448	zrsr2	54	60.227	ENSPMAG00000008152	zrsr2	74	60.511	Petromyzon_marinus
ENSDARG00000058448	zrsr2	54	69.516	ENSPLAG00000019869	zrsr2	58	69.516	Poecilia_latipinna
ENSDARG00000058448	zrsr2	54	69.516	ENSPMEG00000024070	zrsr2	58	69.516	Poecilia_mexicana
ENSDARG00000058448	zrsr2	65	59.529	ENSPPYG00000020150	ZRSR2	74	65.352	Pongo_abelii
ENSDARG00000058448	zrsr2	61	61.111	ENSPCOG00000027178	ZRSR2	74	65.352	Propithecus_coquereli
ENSDARG00000058448	zrsr2	54	61.517	ENSPVAG00000010216	ZRSR2	76	61.798	Pteropus_vampyrus
ENSDARG00000058448	zrsr2	80	56.513	ENSPNYG00000018426	zrsr2	69	68.579	Pundamilia_nyererei
ENSDARG00000058448	zrsr2	63	59.211	ENSRNOG00000009639	Zrsr1	93	56.028	Rattus_norvegicus
ENSDARG00000058448	zrsr2	64	50.847	ENSRBIG00000035472	ZRSR2	68	55.030	Rhinopithecus_bieti
ENSDARG00000058448	zrsr2	60	60.274	ENSRBIG00000033960	-	71	72.024	Rhinopithecus_bieti
ENSDARG00000058448	zrsr2	66	55.319	ENSRROG00000041659	-	71	65.132	Rhinopithecus_roxellana
ENSDARG00000058448	zrsr2	67	58.770	ENSRROG00000030588	ZRSR2	74	65.352	Rhinopithecus_roxellana
ENSDARG00000058448	zrsr2	64	52.913	ENSSBOG00000017836	ZRSR2	72	56.571	Saimiri_boliviensis_boliviensis
ENSDARG00000058448	zrsr2	54	68.067	ENSSHAG00000013271	ZRSR2	74	68.839	Sarcophilus_harrisii
ENSDARG00000058448	zrsr2	57	69.189	ENSSFOG00015009363	zrsr2	52	70.690	Scleropages_formosus
ENSDARG00000058448	zrsr2	57	69.149	ENSSMAG00000013874	zrsr2	57	69.672	Scophthalmus_maximus
ENSDARG00000058448	zrsr2	57	67.277	ENSSDUG00000002784	zrsr2	59	68.267	Seriola_dumerili
ENSDARG00000058448	zrsr2	67	56.876	ENSSPUG00000007432	ZRSR2	74	65.361	Sphenodon_punctatus
ENSDARG00000058448	zrsr2	50	70.612	ENSSPAG00000010595	zrsr2	51	67.628	Stegastes_partitus
ENSDARG00000058448	zrsr2	59	59.173	ENSSSCG00000030283	-	72	61.714	Sus_scrofa
ENSDARG00000058448	zrsr2	69	58.571	ENSTRUG00000023769	U2AF1-RS2	60	67.397	Takifugu_rubripes
ENSDARG00000058448	zrsr2	55	64.684	ENSVPAG00000007641	ZRSR2	69	68.710	Vicugna_pacos
ENSDARG00000058448	zrsr2	52	54.896	ENSVVUG00000009615	-	74	54.896	Vulpes_vulpes
ENSDARG00000058448	zrsr2	55	67.898	ENSXETG00000031542	ZRSR2	76	68.182	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	-	IEA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005681	spliceosomal complex	21873635.	IBA	Component
GO:0030628	pre-mRNA 3'-splice site binding	21873635.	IBA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0089701	U2AF	21873635.	IBA	Component
GO:0089701	U2AF	-	IEA	Component