EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000058522 (Gene tree)
Gene ID: 567601
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 72074 bases
Position: chr6:44089189-44161262
Accession: ZDB-GENE-070112-1412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000036580	SHQ1	PF04925.15	2e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000035513	-	4704	XM_005166052	ENSDARP00000036580	586 (aa)	XP_005166109	F1QC67

Gene Model

Click here to download ENSDARG00000058522's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000058522's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000058522	shq1	69	59.662	ENSG00000144736	SHQ1	100	66.000	Homo_sapiens
ENSDARG00000058522	shq1	70	58.907	ENSAMEG00000015140	SHQ1	76	59.039	Ailuropoda_melanoleuca
ENSDARG00000058522	shq1	98	52.913	ENSACIG00000021249	shq1	98	53.987	Amphilophus_citrinellus
ENSDARG00000058522	shq1	97	54.590	ENSAPEG00000021686	shq1	98	55.263	Amphiprion_percula
ENSDARG00000058522	shq1	99	54.517	ENSATEG00000008475	shq1	72	69.053	Anabas_testudineus
ENSDARG00000058522	shq1	69	59.233	ENSAPLG00000013926	SHQ1	86	58.945	Anas_platyrhynchos
ENSDARG00000058522	shq1	71	59.485	ENSACAG00000014809	SHQ1	65	59.174	Anolis_carolinensis
ENSDARG00000058522	shq1	89	48.427	ENSANAG00000029241	SHQ1	75	57.931	Aotus_nancymaae
ENSDARG00000058522	shq1	77	40.471	ENSANAG00000030500	-	72	43.780	Aotus_nancymaae
ENSDARG00000058522	shq1	98	52.581	ENSACLG00000023077	shq1	95	53.018	Astatotilapia_calliptera
ENSDARG00000058522	shq1	72	69.575	ENSAMXG00000043822	shq1	97	58.844	Astyanax_mexicanus
ENSDARG00000058522	shq1	66	60.050	ENSBTAG00000005436	SHQ1	75	59.404	Bos_taurus
ENSDARG00000058522	shq1	69	58.696	ENSCJAG00000015131	SHQ1	75	57.931	Callithrix_jacchus
ENSDARG00000058522	shq1	66	57.538	ENSCAFG00000006434	SHQ1	75	59.497	Canis_familiaris
ENSDARG00000058522	shq1	66	57.789	ENSCAFG00020016743	SHQ1	75	59.725	Canis_lupus_dingo
ENSDARG00000058522	shq1	66	60.050	ENSCHIG00000012271	SHQ1	68	59.404	Capra_hircus
ENSDARG00000058522	shq1	69	56.553	ENSTSYG00000014439	SHQ1	75	56.682	Carlito_syrichta
ENSDARG00000058522	shq1	78	44.694	ENSCAPG00000009343	SHQ1	62	65.432	Cavia_aperea
ENSDARG00000058522	shq1	75	55.876	ENSCPOG00000011443	SHQ1	74	57.110	Cavia_porcellus
ENSDARG00000058522	shq1	69	48.792	ENSCCAG00000027080	SHQ1	73	49.539	Cebus_capucinus
ENSDARG00000058522	shq1	76	42.094	ENSCCAG00000036087	-	73	45.390	Cebus_capucinus
ENSDARG00000058522	shq1	69	60.145	ENSCATG00000041238	SHQ1	75	59.310	Cercocebus_atys
ENSDARG00000058522	shq1	69	59.518	ENSCLAG00000004206	SHQ1	75	59.725	Chinchilla_lanigera
ENSDARG00000058522	shq1	54	57.538	ENSCSAG00000011514	SHQ1	70	56.647	Chlorocebus_sabaeus
ENSDARG00000058522	shq1	66	42.494	ENSCING00000008013	-	95	41.379	Ciona_intestinalis
ENSDARG00000058522	shq1	66	40.513	ENSCSAVG00000002332	-	99	39.907	Ciona_savignyi
ENSDARG00000058522	shq1	86	51.259	ENSCANG00000039295	SHQ1	76	59.540	Colobus_angolensis_palliatus
ENSDARG00000058522	shq1	76	56.923	ENSCGRG00001012583	Shq1	77	58.810	Cricetulus_griseus_chok1gshd
ENSDARG00000058522	shq1	76	56.923	ENSCGRG00000009849	Shq1	77	58.810	Cricetulus_griseus_crigri
ENSDARG00000058522	shq1	69	67.640	ENSCSEG00000007829	shq1	98	52.922	Cynoglossus_semilaevis
ENSDARG00000058522	shq1	73	65.893	ENSCVAG00000020049	shq1	99	52.685	Cyprinodon_variegatus
ENSDARG00000058522	shq1	69	60.241	ENSDNOG00000033937	SHQ1	75	60.183	Dasypus_novemcinctus
ENSDARG00000058522	shq1	69	52.174	ENSETEG00000005766	SHQ1	76	52.752	Echinops_telfairi
ENSDARG00000058522	shq1	62	47.967	ENSEBUG00000005445	shq1	78	48.538	Eptatretus_burgeri
ENSDARG00000058522	shq1	69	59.277	ENSEASG00005002237	SHQ1	75	59.268	Equus_asinus_asinus
ENSDARG00000058522	shq1	69	59.759	ENSECAG00000015673	SHQ1	74	59.725	Equus_caballus
ENSDARG00000058522	shq1	69	59.518	ENSEEUG00000010568	SHQ1	76	59.174	Erinaceus_europaeus
ENSDARG00000058522	shq1	69	72.906	ENSELUG00000003476	shq1	98	58.491	Esox_lucius
ENSDARG00000058522	shq1	88	49.293	ENSFCAG00000012781	SHQ1	76	59.268	Felis_catus
ENSDARG00000058522	shq1	69	63.855	ENSFALG00000013428	SHQ1	71	63.510	Ficedula_albicollis
ENSDARG00000058522	shq1	69	57.488	ENSFDAG00000005595	SHQ1	67	57.471	Fukomys_damarensis
ENSDARG00000058522	shq1	88	56.071	ENSFHEG00000017552	shq1	99	54.395	Fundulus_heteroclitus
ENSDARG00000058522	shq1	66	66.324	ENSGMOG00000007350	shq1	100	66.324	Gadus_morhua
ENSDARG00000058522	shq1	96	49.919	ENSGALG00000007798	SHQ1	71	60.648	Gallus_gallus
ENSDARG00000058522	shq1	66	66.581	ENSGACG00000011797	shq1	100	66.838	Gasterosteus_aculeatus
ENSDARG00000058522	shq1	69	60.145	ENSGGOG00000034818	SHQ1	75	59.310	Gorilla_gorilla
ENSDARG00000058522	shq1	98	52.827	ENSHBUG00000010857	shq1	98	54.139	Haplochromis_burtoni
ENSDARG00000058522	shq1	69	56.627	ENSHGLG00000003637	SHQ1	68	58.028	Heterocephalus_glaber_female
ENSDARG00000058522	shq1	69	56.627	ENSHGLG00100011957	SHQ1	68	58.028	Heterocephalus_glaber_male
ENSDARG00000058522	shq1	96	52.129	ENSHCOG00000010799	shq1	73	64.336	Hippocampus_comes
ENSDARG00000058522	shq1	88	62.715	ENSIPUG00000001247	shq1	98	59.478	Ictalurus_punctatus
ENSDARG00000058522	shq1	69	57.416	ENSSTOG00000010043	SHQ1	79	57.666	Ictidomys_tridecemlineatus
ENSDARG00000058522	shq1	69	59.277	ENSJJAG00000017611	Shq1	76	59.268	Jaculus_jaculus
ENSDARG00000058522	shq1	96	53.445	ENSKMAG00000004457	shq1	99	54.515	Kryptolebias_marmoratus
ENSDARG00000058522	shq1	73	62.870	ENSLACG00000014243	SHQ1	66	62.785	Latimeria_chalumnae
ENSDARG00000058522	shq1	97	52.707	ENSLOCG00000009970	shq1	76	64.318	Lepisosteus_oculatus
ENSDARG00000058522	shq1	86	36.861	ENSMFAG00000037396	-	73	42.623	Macaca_fascicularis
ENSDARG00000058522	shq1	69	60.145	ENSMFAG00000039148	SHQ1	75	59.310	Macaca_fascicularis
ENSDARG00000058522	shq1	61	58.743	ENSMMUG00000009571	SHQ1	70	57.881	Macaca_mulatta
ENSDARG00000058522	shq1	86	37.044	ENSMMUG00000021761	-	73	42.623	Macaca_mulatta
ENSDARG00000058522	shq1	69	60.145	ENSMNEG00000032667	SHQ1	75	59.310	Macaca_nemestrina
ENSDARG00000058522	shq1	69	59.662	ENSMLEG00000038493	SHQ1	75	58.851	Mandrillus_leucophaeus
ENSDARG00000058522	shq1	97	52.857	ENSMAMG00000023432	shq1	67	67.361	Mastacembelus_armatus
ENSDARG00000058522	shq1	98	52.827	ENSMZEG00005008649	shq1	98	53.105	Maylandia_zebra
ENSDARG00000058522	shq1	96	49.918	ENSMGAG00000009640	SHQ1	72	60.970	Meleagris_gallopavo
ENSDARG00000058522	shq1	73	58.810	ENSMAUG00000022030	Shq1	77	59.039	Mesocricetus_auratus
ENSDARG00000058522	shq1	90	48.129	ENSMICG00000009224	SHQ1	74	55.750	Microcebus_murinus
ENSDARG00000058522	shq1	75	57.174	ENSMOCG00000017836	Shq1	77	59.039	Microtus_ochrogaster
ENSDARG00000058522	shq1	74	66.282	ENSMMOG00000010569	shq1	73	66.979	Mola_mola
ENSDARG00000058522	shq1	83	51.923	ENSMODG00000003926	SHQ1	78	57.666	Monodelphis_domestica
ENSDARG00000058522	shq1	96	53.682	ENSMALG00000008870	shq1	98	54.271	Monopterus_albus
ENSDARG00000058522	shq1	73	59.268	MGP_CAROLIEiJ_G0028689	Shq1	76	59.039	Mus_caroli
ENSDARG00000058522	shq1	74	56.250	ENSMUSG00000035378	Shq1	76	59.268	Mus_musculus
ENSDARG00000058522	shq1	73	60.183	MGP_PahariEiJ_G0022440	Shq1	76	59.954	Mus_pahari
ENSDARG00000058522	shq1	84	53.846	MGP_SPRETEiJ_G0029717	Shq1	76	59.497	Mus_spretus
ENSDARG00000058522	shq1	67	55.309	ENSMLUG00000013539	SHQ1	74	56.266	Myotis_lucifugus
ENSDARG00000058522	shq1	84	48.000	ENSNGAG00000023317	Shq1	76	54.206	Nannospalax_galili
ENSDARG00000058522	shq1	83	47.925	ENSNBRG00000024004	shq1	98	49.126	Neolamprologus_brichardi
ENSDARG00000058522	shq1	86	49.640	ENSNLEG00000002731	SHQ1	75	58.851	Nomascus_leucogenys
ENSDARG00000058522	shq1	64	57.407	ENSMEUG00000009350	-	71	57.407	Notamacropus_eugenii
ENSDARG00000058522	shq1	76	54.684	ENSODEG00000009192	SHQ1	80	57.859	Octodon_degus
ENSDARG00000058522	shq1	98	53.065	ENSONIG00000020264	shq1	98	54.050	Oreochromis_niloticus
ENSDARG00000058522	shq1	69	60.964	ENSOCUG00000016695	SHQ1	74	60.550	Oryctolagus_cuniculus
ENSDARG00000058522	shq1	72	67.529	ENSORLG00000023538	shq1	78	67.209	Oryzias_latipes
ENSDARG00000058522	shq1	72	68.000	ENSORLG00020003697	shq1	78	67.674	Oryzias_latipes_hni
ENSDARG00000058522	shq1	72	67.529	ENSORLG00015021040	shq1	78	67.209	Oryzias_latipes_hsok
ENSDARG00000058522	shq1	72	68.310	ENSOMEG00000001225	shq1	78	68.213	Oryzias_melastigma
ENSDARG00000058522	shq1	79	51.731	ENSOGAG00000003898	SHQ1	77	57.500	Otolemur_garnettii
ENSDARG00000058522	shq1	69	58.810	ENSOARG00000009547	SHQ1	75	58.503	Ovis_aries
ENSDARG00000058522	shq1	77	40.909	ENSPPAG00000043263	-	73	41.763	Pan_paniscus
ENSDARG00000058522	shq1	69	59.903	ENSPPAG00000027714	SHQ1	75	59.080	Pan_paniscus
ENSDARG00000058522	shq1	77	40.693	ENSPTRG00000048303	-	73	41.531	Pan_troglodytes
ENSDARG00000058522	shq1	69	58.111	ENSPANG00000002881	SHQ1	75	59.080	Papio_anubis
ENSDARG00000058522	shq1	71	69.048	ENSPKIG00000021517	shq1	76	68.298	Paramormyrops_kingsleyae
ENSDARG00000058522	shq1	73	64.802	ENSPMGG00000008838	shq1	73	64.486	Periophthalmus_magnuspinnatus
ENSDARG00000058522	shq1	66	60.050	ENSPEMG00000000251	Shq1	76	59.268	Peromyscus_maniculatus_bairdii
ENSDARG00000058522	shq1	73	55.708	ENSPMAG00000005372	shq1	98	55.936	Petromyzon_marinus
ENSDARG00000058522	shq1	88	56.538	ENSPFOG00000003118	shq1	99	57.274	Poecilia_formosa
ENSDARG00000058522	shq1	73	53.319	ENSPMEG00000011076	shq1	99	55.088	Poecilia_mexicana
ENSDARG00000058522	shq1	78	57.083	ENSPREG00000000591	shq1	92	57.708	Poecilia_reticulata
ENSDARG00000058522	shq1	86	50.899	ENSPPYG00000013717	SHQ1	75	58.851	Pongo_abelii
ENSDARG00000058522	shq1	69	59.330	ENSPCAG00000009035	SHQ1	76	59.497	Procavia_capensis
ENSDARG00000058522	shq1	98	52.581	ENSPNYG00000003878	shq1	98	53.719	Pundamilia_nyererei
ENSDARG00000058522	shq1	95	63.361	ENSPNAG00000026840	shq1	98	62.687	Pygocentrus_nattereri
ENSDARG00000058522	shq1	73	58.957	ENSRNOG00000005433	Shq1	72	59.497	Rattus_norvegicus
ENSDARG00000058522	shq1	86	48.540	ENSRBIG00000026280	SHQ1	75	57.845	Rhinopithecus_bieti
ENSDARG00000058522	shq1	86	49.820	ENSRROG00000034126	SHQ1	76	59.310	Rhinopithecus_roxellana
ENSDARG00000058522	shq1	69	52.184	ENSSBOG00000021038	SHQ1	73	52.535	Saimiri_boliviensis_boliviensis
ENSDARG00000058522	shq1	73	58.314	ENSSHAG00000015077	SHQ1	78	58.087	Sarcophilus_harrisii
ENSDARG00000058522	shq1	97	60.351	ENSSFOG00015016241	shq1	99	60.284	Scleropages_formosus
ENSDARG00000058522	shq1	97	53.312	ENSSMAG00000016151	shq1	71	66.900	Scophthalmus_maximus
ENSDARG00000058522	shq1	72	68.545	ENSSDUG00000011986	shq1	99	53.896	Seriola_dumerili
ENSDARG00000058522	shq1	97	54.619	ENSSLDG00000013908	shq1	99	53.947	Seriola_lalandi_dorsalis
ENSDARG00000058522	shq1	88	43.942	ENSSARG00000007119	SHQ1	77	49.537	Sorex_araneus
ENSDARG00000058522	shq1	58	56.125	ENSSPUG00000011526	-	65	58.120	Sphenodon_punctatus
ENSDARG00000058522	shq1	88	50.263	ENSSSCG00000011518	SHQ1	98	49.912	Sus_scrofa
ENSDARG00000058522	shq1	69	62.233	ENSTGUG00000009933	SHQ1	76	62.045	Taeniopygia_guttata
ENSDARG00000058522	shq1	69	62.530	ENSTNIG00000007354	shq1	96	61.521	Tetraodon_nigroviridis
ENSDARG00000058522	shq1	54	70.213	ENSTBEG00000011295	SHQ1	56	70.213	Tupaia_belangeri
ENSDARG00000058522	shq1	73	59.039	ENSTTRG00000005320	SHQ1	75	59.039	Tursiops_truncatus
ENSDARG00000058522	shq1	70	60.194	ENSUMAG00000024031	SHQ1	74	60.280	Ursus_maritimus
ENSDARG00000058522	shq1	66	57.035	ENSVVUG00000013906	SHQ1	75	59.268	Vulpes_vulpes
ENSDARG00000058522	shq1	74	57.273	ENSXETG00000032215	shq1	71	58.333	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000493	box H/ACA snoRNP assembly	21873635.	IBA	Process
GO:0000493	box H/ACA snoRNP assembly	-	IEA	Process
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005829	cytosol	-	IEA	Component
GO:0022618	ribonucleoprotein complex assembly	-	ISS	Process
GO:0051082	unfolded protein binding	21873635.	IBA	Function