EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000058679 (Gene tree)
Gene ID: 569093
Gene Symbol: zgc:114104
Alias: -
Full Name: zgc:114104
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 8208 bases
Position: chr21:11521163-11529370
Accession: ZDB-GENE-050913-63
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000118594	zf-met	PF12874.7	1.6e-25	1	4
ENSDARP00000118594	zf-met	PF12874.7	1.6e-25	2	4
ENSDARP00000118594	zf-met	PF12874.7	1.6e-25	3	4
ENSDARP00000118594	zf-met	PF12874.7	1.6e-25	4	4
ENSDARP00000118594	zf-C2H2_jaz	PF12171.8	8.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000139267	-	2738	XM_021468891	ENSDARP00000118594	582 (aa)	XP_021324566	F1QKW1

Gene Model

Click here to download ENSDARG00000058679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000058679's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000058679	zgc:114104	54	61.111	ENSCCAG00000023924	ZMAT1	52	61.111	Cebus_capucinus
ENSDARG00000058679	zgc:114104	75	48.515	ENSCPBG00000001356	ZMAT1	54	47.799	Chrysemys_picta_bellii
ENSDARG00000058679	zgc:114104	50	36.585	ENSMFAG00000042343	ZMAT1	65	36.585	Macaca_fascicularis
ENSDARG00000058679	zgc:114104	55	61.111	ENSNLEG00000030520	ZMAT1	57	61.111	Nomascus_leucogenys
ENSDARG00000058679	zgc:114104	55	61.111	ENSPPYG00000020561	ZMAT1	54	61.111	Pongo_abelii
ENSDARG00000058679	zgc:114104	91	34.978	ENSSBOG00000029970	ZMAT1	52	61.111	Saimiri_boliviensis_boliviensis
ENSDARG00000058679	zgc:114104	88	33.688	ENSSHAG00000011087	-	86	42.739	Sarcophilus_harrisii
ENSDARG00000058679	zgc:114104	92	34.835	ENSSPUG00000004951	ZMAT1	50	48.097	Sphenodon_punctatus
ENSDARG00000058679	zgc:114104	99	38.779	ENSTRUG00000014880	zgc:114104	59	47.214	Takifugu_rubripes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0008270	zinc ion binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function