EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000059070 (Gene tree)
Gene ID: 337230
Gene Symbol: gars
Alias: metronome|mrn|si:dkey-276i5.1|wu:fb02f03
Full Name: glycyl-tRNA synthetase
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 18914 bases
Position: chr24:20536056-20554969
Accession: ZDB-GENE-030131-9174
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000076519	HGTP_anticodon	PF03129.20	1e-22	1	1
ENSDARP00000076519	tRNA-synt_2b	PF00587.25	6.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000082082	-	2622	XM_017353962	ENSDARP00000076519	690 (aa)	XP_017209451	F1QUV7

Gene Model

Click here to download ENSDARG00000059070's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000059070's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000059070	gars	99	87.026	ENSG00000106105	GARS	95	86.301	Homo_sapiens
ENSDARG00000059070	gars	98	83.382	ENSAPOG00000020089	gars	99	83.382	Acanthochromis_polyacanthus
ENSDARG00000059070	gars	99	92.151	ENSAPOG00000019999	gars	92	92.151	Acanthochromis_polyacanthus
ENSDARG00000059070	gars	99	87.318	ENSAMEG00000006652	GARS	93	87.318	Ailuropoda_melanoleuca
ENSDARG00000059070	gars	100	91.159	ENSACIG00000020744	gars	92	91.159	Amphilophus_citrinellus
ENSDARG00000059070	gars	98	85.503	ENSACIG00000020797	gars	99	85.503	Amphilophus_citrinellus
ENSDARG00000059070	gars	99	92.733	ENSAOCG00000009108	gars	92	92.733	Amphiprion_ocellaris
ENSDARG00000059070	gars	74	88.039	ENSAOCG00000002479	gars	100	88.039	Amphiprion_ocellaris
ENSDARG00000059070	gars	99	83.796	ENSAPEG00000018903	gars	99	83.796	Amphiprion_percula
ENSDARG00000059070	gars	99	92.442	ENSAPEG00000018850	gars	92	92.442	Amphiprion_percula
ENSDARG00000059070	gars	99	91.499	ENSATEG00000008784	gars	100	92.564	Anabas_testudineus
ENSDARG00000059070	gars	67	88.362	ENSAPLG00000015638	-	100	88.362	Anas_platyrhynchos
ENSDARG00000059070	gars	99	86.152	ENSACAG00000005601	GARS	100	86.152	Anolis_carolinensis
ENSDARG00000059070	gars	99	87.299	ENSANAG00000022536	GARS	100	87.299	Aotus_nancymaae
ENSDARG00000059070	gars	100	91.594	ENSACLG00000027174	gars	92	91.594	Astatotilapia_calliptera
ENSDARG00000059070	gars	98	84.513	ENSACLG00000027158	gars	99	84.513	Astatotilapia_calliptera
ENSDARG00000059070	gars	100	86.522	ENSAMXG00000014895	gars	96	93.802	Astyanax_mexicanus
ENSDARG00000059070	gars	99	87.026	ENSBTAG00000018972	GARS	93	87.026	Bos_taurus
ENSDARG00000059070	gars	97	57.887	WBGene00001744	gars-1	99	57.887	Caenorhabditis_elegans
ENSDARG00000059070	gars	99	86.880	ENSCJAG00000008595	GARS	95	86.006	Callithrix_jacchus
ENSDARG00000059070	gars	98	87.059	ENSCAFG00000003086	GARS	85	86.931	Canis_familiaris
ENSDARG00000059070	gars	98	87.059	ENSCAFG00020004272	GARS	98	87.059	Canis_lupus_dingo
ENSDARG00000059070	gars	99	86.589	ENSCHIG00000016912	GARS	100	88.149	Capra_hircus
ENSDARG00000059070	gars	99	87.609	ENSTSYG00000008538	GARS	93	87.609	Carlito_syrichta
ENSDARG00000059070	gars	91	66.930	ENSCAPG00000007526	GARS	100	69.304	Cavia_aperea
ENSDARG00000059070	gars	98	86.222	ENSCPOG00000007547	GARS	93	86.222	Cavia_porcellus
ENSDARG00000059070	gars	99	87.026	ENSCCAG00000011512	GARS	93	87.026	Cebus_capucinus
ENSDARG00000059070	gars	99	87.318	ENSCATG00000036699	GARS	93	87.318	Cercocebus_atys
ENSDARG00000059070	gars	99	87.464	ENSCLAG00000007985	GARS	96	87.464	Chinchilla_lanigera
ENSDARG00000059070	gars	99	87.464	ENSCSAG00000014588	GARS	93	87.464	Chlorocebus_sabaeus
ENSDARG00000059070	gars	99	75.510	ENSCHOG00000003253	GARS	92	75.510	Choloepus_hoffmanni
ENSDARG00000059070	gars	97	87.612	ENSCPBG00000019482	GARS	92	87.612	Chrysemys_picta_bellii
ENSDARG00000059070	gars	98	62.611	ENSCING00000008937	-	99	62.611	Ciona_intestinalis
ENSDARG00000059070	gars	99	87.172	ENSCANG00000027727	GARS	93	87.172	Colobus_angolensis_palliatus
ENSDARG00000059070	gars	99	87.007	ENSCGRG00001020450	Gars	94	86.131	Cricetulus_griseus_chok1gshd
ENSDARG00000059070	gars	97	87.688	ENSCGRG00000008342	Gars	94	87.688	Cricetulus_griseus_crigri
ENSDARG00000059070	gars	98	78.466	ENSCSEG00000017654	gars	98	78.466	Cynoglossus_semilaevis
ENSDARG00000059070	gars	99	92.151	ENSCSEG00000017671	gars	92	92.151	Cynoglossus_semilaevis
ENSDARG00000059070	gars	100	91.751	ENSCVAG00000007149	gars	92	91.751	Cyprinodon_variegatus
ENSDARG00000059070	gars	99	87.755	ENSDNOG00000046478	GARS	100	88.467	Dasypus_novemcinctus
ENSDARG00000059070	gars	99	85.693	ENSDORG00000002672	Gars	94	85.569	Dipodomys_ordii
ENSDARG00000059070	gars	98	60.741	FBgn0027088	GlyRS	99	60.741	Drosophila_melanogaster
ENSDARG00000059070	gars	91	84.211	ENSETEG00000012196	GARS	97	84.211	Echinops_telfairi
ENSDARG00000059070	gars	69	79.958	ENSEBUG00000002254	gars	89	79.958	Eptatretus_burgeri
ENSDARG00000059070	gars	69	74.689	ENSEBUG00000002654	gars	87	74.689	Eptatretus_burgeri
ENSDARG00000059070	gars	99	87.464	ENSEASG00005000388	GARS	93	87.464	Equus_asinus_asinus
ENSDARG00000059070	gars	99	87.609	ENSECAG00000019373	GARS	93	87.609	Equus_caballus
ENSDARG00000059070	gars	99	91.001	ENSELUG00000003692	gars	92	91.001	Esox_lucius
ENSDARG00000059070	gars	99	87.755	ENSFCAG00000011415	GARS	81	87.755	Felis_catus
ENSDARG00000059070	gars	89	87.338	ENSFALG00000006550	GARS	100	87.338	Ficedula_albicollis
ENSDARG00000059070	gars	96	87.820	ENSFDAG00000014466	GARS	100	87.820	Fukomys_damarensis
ENSDARG00000059070	gars	100	91.172	ENSFHEG00000013189	gars	92	91.172	Fundulus_heteroclitus
ENSDARG00000059070	gars	100	88.261	ENSGMOG00000010728	gars	92	88.261	Gadus_morhua
ENSDARG00000059070	gars	90	79.487	ENSGMOG00000008856	-	100	79.487	Gadus_morhua
ENSDARG00000059070	gars	99	86.569	ENSGALG00000005694	GARS	100	86.569	Gallus_gallus
ENSDARG00000059070	gars	100	92.041	ENSGAFG00000005228	gars	92	92.041	Gambusia_affinis
ENSDARG00000059070	gars	99	90.975	ENSGACG00000003410	gars	92	90.975	Gasterosteus_aculeatus
ENSDARG00000059070	gars	89	88.655	ENSGAGG00000017755	GARS	99	88.655	Gopherus_agassizii
ENSDARG00000059070	gars	99	87.318	ENSGGOG00000004916	GARS	93	87.318	Gorilla_gorilla
ENSDARG00000059070	gars	100	91.739	ENSHBUG00000016481	gars	92	91.739	Haplochromis_burtoni
ENSDARG00000059070	gars	98	83.923	ENSHBUG00000000815	gars	99	83.923	Haplochromis_burtoni
ENSDARG00000059070	gars	99	87.464	ENSHGLG00000016342	GARS	93	87.464	Heterocephalus_glaber_female
ENSDARG00000059070	gars	99	86.589	ENSHGLG00100006787	GARS	97	86.589	Heterocephalus_glaber_male
ENSDARG00000059070	gars	99	88.029	ENSHCOG00000005261	gars	100	88.029	Hippocampus_comes
ENSDARG00000059070	gars	54	70.557	ENSHCOG00000005286	gars	96	70.557	Hippocampus_comes
ENSDARG00000059070	gars	99	85.901	ENSIPUG00000011443	gars	92	85.901	Ictalurus_punctatus
ENSDARG00000059070	gars	99	86.147	ENSSTOG00000015493	GARS	91	86.147	Ictidomys_tridecemlineatus
ENSDARG00000059070	gars	99	86.152	ENSJJAG00000022474	Gars	99	86.152	Jaculus_jaculus
ENSDARG00000059070	gars	99	91.533	ENSKMAG00000010428	gars	91	91.533	Kryptolebias_marmoratus
ENSDARG00000059070	gars	100	92.319	ENSLBEG00000019228	gars	92	92.319	Labrus_bergylta
ENSDARG00000059070	gars	56	82.216	ENSLBEG00000013122	-	100	82.216	Labrus_bergylta
ENSDARG00000059070	gars	98	85.355	ENSLBEG00000019179	gars	100	85.355	Labrus_bergylta
ENSDARG00000059070	gars	75	87.500	ENSLACG00000002810	GARS	100	87.500	Latimeria_chalumnae
ENSDARG00000059070	gars	100	91.739	ENSLOCG00000009688	gars	92	91.739	Lepisosteus_oculatus
ENSDARG00000059070	gars	99	86.861	ENSLAFG00000002496	GARS	99	85.901	Loxodonta_africana
ENSDARG00000059070	gars	99	87.318	ENSMFAG00000038863	GARS	93	87.318	Macaca_fascicularis
ENSDARG00000059070	gars	99	87.318	ENSMMUG00000004719	GARS	93	87.318	Macaca_mulatta
ENSDARG00000059070	gars	99	81.195	ENSMNEG00000043203	GARS	93	81.195	Macaca_nemestrina
ENSDARG00000059070	gars	99	87.172	ENSMLEG00000044430	GARS	93	87.172	Mandrillus_leucophaeus
ENSDARG00000059070	gars	100	91.739	ENSMAMG00000001894	gars	99	91.454	Mastacembelus_armatus
ENSDARG00000059070	gars	100	91.739	ENSMZEG00005019740	gars	92	91.739	Maylandia_zebra
ENSDARG00000059070	gars	98	84.911	ENSMZEG00005019754	gars	100	84.911	Maylandia_zebra
ENSDARG00000059070	gars	99	86.569	ENSMGAG00000003162	GARS	93	86.569	Meleagris_gallopavo
ENSDARG00000059070	gars	99	86.715	ENSMAUG00000016852	Gars	94	86.715	Mesocricetus_auratus
ENSDARG00000059070	gars	99	87.591	ENSMICG00000046006	GARS	100	87.591	Microcebus_murinus
ENSDARG00000059070	gars	99	86.715	ENSMOCG00000017680	Gars	94	86.715	Microtus_ochrogaster
ENSDARG00000059070	gars	100	87.879	ENSMMOG00000009695	gars	92	87.914	Mola_mola
ENSDARG00000059070	gars	50	79.532	ENSMODG00000021163	-	100	79.532	Monodelphis_domestica
ENSDARG00000059070	gars	100	91.159	ENSMALG00000006592	gars	85	91.159	Monopterus_albus
ENSDARG00000059070	gars	99	86.715	MGP_CAROLIEiJ_G0028410	Gars	94	86.715	Mus_caroli
ENSDARG00000059070	gars	99	86.715	ENSMUSG00000029777	Gars	94	86.715	Mus_musculus
ENSDARG00000059070	gars	99	86.131	MGP_PahariEiJ_G0022160	Gars	94	86.131	Mus_pahari
ENSDARG00000059070	gars	99	86.715	MGP_SPRETEiJ_G0029412	Gars	99	88.571	Mus_spretus
ENSDARG00000059070	gars	99	87.755	ENSMPUG00000005116	GARS	93	87.755	Mustela_putorius_furo
ENSDARG00000059070	gars	99	87.755	ENSMLUG00000002043	GARS	93	87.755	Myotis_lucifugus
ENSDARG00000059070	gars	99	86.696	ENSNGAG00000021844	Gars	94	86.569	Nannospalax_galili
ENSDARG00000059070	gars	100	91.739	ENSNBRG00000018585	gars	92	91.739	Neolamprologus_brichardi
ENSDARG00000059070	gars	56	83.033	ENSNBRG00000018643	gars	100	83.033	Neolamprologus_brichardi
ENSDARG00000059070	gars	99	87.609	ENSNLEG00000015152	GARS	93	87.609	Nomascus_leucogenys
ENSDARG00000059070	gars	96	77.861	ENSMEUG00000001741	GARS	100	77.861	Notamacropus_eugenii
ENSDARG00000059070	gars	86	86.735	ENSOPRG00000005342	GARS	80	86.735	Ochotona_princeps
ENSDARG00000059070	gars	99	86.397	ENSODEG00000008246	GARS	87	86.397	Octodon_degus
ENSDARG00000059070	gars	97	81.493	ENSOANG00000006262	GARS	91	81.493	Ornithorhynchus_anatinus
ENSDARG00000059070	gars	98	86.745	ENSOCUG00000005295	GARS	99	86.745	Oryctolagus_cuniculus
ENSDARG00000059070	gars	99	89.580	ENSORLG00000009470	gars	92	89.580	Oryzias_latipes
ENSDARG00000059070	gars	94	91.358	ENSORLG00020013036	gars	100	88.442	Oryzias_latipes_hni
ENSDARG00000059070	gars	99	90.552	ENSORLG00015012886	gars	92	90.552	Oryzias_latipes_hsok
ENSDARG00000059070	gars	57	80.457	ENSOMEG00000000133	gars	100	80.457	Oryzias_melastigma
ENSDARG00000059070	gars	99	87.064	ENSOGAG00000013321	GARS	93	87.064	Otolemur_garnettii
ENSDARG00000059070	gars	99	86.443	ENSOARG00000008017	GARS	93	86.443	Ovis_aries
ENSDARG00000059070	gars	99	87.318	ENSPPAG00000037266	GARS	93	87.318	Pan_paniscus
ENSDARG00000059070	gars	99	87.755	ENSPPRG00000001917	GARS	93	87.755	Panthera_pardus
ENSDARG00000059070	gars	99	87.737	ENSPTIG00000016096	GARS	100	87.737	Panthera_tigris_altaica
ENSDARG00000059070	gars	99	87.318	ENSPTRG00000019042	GARS	93	87.318	Pan_troglodytes
ENSDARG00000059070	gars	99	87.172	ENSPANG00000026231	GARS	93	87.172	Papio_anubis
ENSDARG00000059070	gars	99	90.856	ENSPKIG00000014863	gars	89	90.856	Paramormyrops_kingsleyae
ENSDARG00000059070	gars	97	88.138	ENSPSIG00000010935	GARS	99	88.799	Pelodiscus_sinensis
ENSDARG00000059070	gars	56	81.980	ENSPMGG00000023648	gars	99	81.980	Periophthalmus_magnuspinnatus
ENSDARG00000059070	gars	99	86.409	ENSPMGG00000023644	gars	92	86.409	Periophthalmus_magnuspinnatus
ENSDARG00000059070	gars	96	87.368	ENSPEMG00000019930	Gars	100	87.368	Peromyscus_maniculatus_bairdii
ENSDARG00000059070	gars	98	77.306	ENSPMAG00000006586	gars	98	77.306	Petromyzon_marinus
ENSDARG00000059070	gars	99	82.122	ENSPCIG00000017010	GARS	90	82.122	Phascolarctos_cinereus
ENSDARG00000059070	gars	100	92.041	ENSPFOG00000004593	gars	92	92.041	Poecilia_formosa
ENSDARG00000059070	gars	100	91.896	ENSPLAG00000008038	gars	92	91.896	Poecilia_latipinna
ENSDARG00000059070	gars	100	91.896	ENSPMEG00000005901	gars	92	91.896	Poecilia_mexicana
ENSDARG00000059070	gars	100	92.185	ENSPREG00000020960	gars	90	92.185	Poecilia_reticulata
ENSDARG00000059070	gars	99	86.804	ENSPPYG00000017673	GARS	93	86.735	Pongo_abelii
ENSDARG00000059070	gars	99	84.526	ENSPCAG00000007199	GARS	92	84.302	Procavia_capensis
ENSDARG00000059070	gars	99	84.257	ENSPCOG00000008887	GARS	93	84.257	Propithecus_coquereli
ENSDARG00000059070	gars	99	87.609	ENSPVAG00000013565	GARS	93	87.609	Pteropus_vampyrus
ENSDARG00000059070	gars	100	91.014	ENSPNYG00000005017	gars	92	91.014	Pundamilia_nyererei
ENSDARG00000059070	gars	98	84.071	ENSPNYG00000004960	gars	99	84.071	Pundamilia_nyererei
ENSDARG00000059070	gars	100	90.870	ENSPNAG00000020164	gars	93	90.870	Pygocentrus_nattereri
ENSDARG00000059070	gars	99	86.861	ENSRNOG00000011052	Gars	94	86.861	Rattus_norvegicus
ENSDARG00000059070	gars	98	84.978	ENSRBIG00000040287	GARS	92	84.978	Rhinopithecus_bieti
ENSDARG00000059070	gars	99	86.735	ENSRROG00000044600	GARS	93	86.735	Rhinopithecus_roxellana
ENSDARG00000059070	gars	89	47.167	YBR121C	GRS1	98	47.779	Saccharomyces_cerevisiae
ENSDARG00000059070	gars	85	49.406	YPR081C	-	95	49.406	Saccharomyces_cerevisiae
ENSDARG00000059070	gars	99	86.589	ENSSBOG00000022287	GARS	93	86.589	Saimiri_boliviensis_boliviensis
ENSDARG00000059070	gars	99	77.826	ENSSHAG00000003419	GARS	99	77.826	Sarcophilus_harrisii
ENSDARG00000059070	gars	99	90.698	ENSSFOG00015000573	gars	90	90.698	Scleropages_formosus
ENSDARG00000059070	gars	98	85.926	ENSSMAG00000013709	gars	99	85.926	Scophthalmus_maximus
ENSDARG00000059070	gars	100	92.174	ENSSMAG00000013672	gars	92	92.174	Scophthalmus_maximus
ENSDARG00000059070	gars	100	92.464	ENSSDUG00000016795	gars	92	92.464	Seriola_dumerili
ENSDARG00000059070	gars	98	75.369	ENSSDUG00000016758	gars	100	75.369	Seriola_dumerili
ENSDARG00000059070	gars	100	92.464	ENSSLDG00000014279	gars	92	92.464	Seriola_lalandi_dorsalis
ENSDARG00000059070	gars	98	86.391	ENSSLDG00000014238	gars	100	86.391	Seriola_lalandi_dorsalis
ENSDARG00000059070	gars	74	78.367	ENSSARG00000008410	GARS	82	78.367	Sorex_araneus
ENSDARG00000059070	gars	99	87.683	ENSSPUG00000001815	-	93	86.831	Sphenodon_punctatus
ENSDARG00000059070	gars	100	85.942	ENSSPAG00000012003	gars	91	85.942	Stegastes_partitus
ENSDARG00000059070	gars	99	87.883	ENSSSCG00000016677	GARS	92	87.755	Sus_scrofa
ENSDARG00000059070	gars	96	84.627	ENSTGUG00000000364	GARS	100	84.627	Taeniopygia_guttata
ENSDARG00000059070	gars	99	90.988	ENSTRUG00000017557	gars	92	90.988	Takifugu_rubripes
ENSDARG00000059070	gars	100	89.565	ENSTNIG00000012738	gars	97	89.565	Tetraodon_nigroviridis
ENSDARG00000059070	gars	93	80.156	ENSTBEG00000008972	GARS	86	80.156	Tupaia_belangeri
ENSDARG00000059070	gars	96	87.048	ENSTTRG00000000334	GARS	99	87.048	Tursiops_truncatus
ENSDARG00000059070	gars	99	87.883	ENSUAMG00000016756	GARS	93	87.755	Ursus_americanus
ENSDARG00000059070	gars	97	87.688	ENSUMAG00000002158	GARS	100	88.961	Ursus_maritimus
ENSDARG00000059070	gars	99	80.175	ENSVPAG00000009438	GARS	94	80.175	Vicugna_pacos
ENSDARG00000059070	gars	98	87.059	ENSVVUG00000020981	GARS	87	86.931	Vulpes_vulpes
ENSDARG00000059070	gars	99	85.072	ENSXETG00000018474	gars	92	85.072	Xenopus_tropicalis
ENSDARG00000059070	gars	100	90.935	ENSXCOG00000010005	gars	92	90.935	Xiphophorus_couchianus
ENSDARG00000059070	gars	100	92.330	ENSXMAG00000009402	gars	90	92.330	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0004812	aminoacyl-tRNA ligase activity	-	IEA	Function
GO:0004820	glycine-tRNA ligase activity	21873635.	IBA	Function
GO:0004820	glycine-tRNA ligase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0006412	translation	27008886.	IMP	Process
GO:0006418	tRNA aminoacylation for protein translation	-	IEA	Process
GO:0006426	glycyl-tRNA aminoacylation	21873635.	IBA	Process
GO:0006426	glycyl-tRNA aminoacylation	-	IEA	Process
GO:0070150	mitochondrial glycyl-tRNA aminoacylation	21873635.	IBA	Process