EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSDARG00000059553 (Gene tree)
Gene ID: 570858
Gene Symbol: sympk
Alias: si:dkeyp-117b8.1
Full Name: symplekin
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 30719 bases
Position: chr5:61862199-61892917
Accession: ZDB-GENE-060526-361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000113544	Symplekin_C	PF12295.8	4.9e-73	1	1
ENSDARP00000077314	Symplekin_C	PF12295.8	5e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000082879	-	6361	XM_694383	ENSDARP00000077314	1248 (aa)	XP_699475	A0A0R4I9D6
ENSDART00000132452	-	4142	XM_005165573	ENSDARP00000113544	1247 (aa)	XP_005165630	A2CET0

Gene Model

Click here to download ENSDARG00000059553's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03015	mRNA surveillance pathway	KEGG
dre04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000059553's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000059553	sympk	88	74.091	ENSG00000125755	SYMPK	90	81.250	Homo_sapiens
ENSDARG00000059553	sympk	86	83.704	ENSAPOG00000015934	sympk	97	81.471	Acanthochromis_polyacanthus
ENSDARG00000059553	sympk	89	73.519	ENSAMEG00000000680	SYMPK	89	71.875	Ailuropoda_melanoleuca
ENSDARG00000059553	sympk	87	82.825	ENSACIG00000006357	sympk	91	82.825	Amphilophus_citrinellus
ENSDARG00000059553	sympk	96	78.010	ENSAOCG00000024124	sympk	97	78.236	Amphiprion_ocellaris
ENSDARG00000059553	sympk	99	76.348	ENSAPEG00000003465	sympk	97	77.824	Amphiprion_percula
ENSDARG00000059553	sympk	99	76.419	ENSATEG00000008472	sympk	98	77.262	Anabas_testudineus
ENSDARG00000059553	sympk	81	71.415	ENSACAG00000004126	SYMPK	85	71.415	Anolis_carolinensis
ENSDARG00000059553	sympk	88	74.273	ENSANAG00000021087	SYMPK	98	74.381	Aotus_nancymaae
ENSDARG00000059553	sympk	89	82.088	ENSACLG00000001813	sympk	98	77.075	Astatotilapia_calliptera
ENSDARG00000059553	sympk	92	83.679	ENSAMXG00000013677	sympk	97	81.796	Astyanax_mexicanus
ENSDARG00000059553	sympk	88	73.636	ENSBTAG00000012101	SYMPK	88	72.056	Bos_taurus
ENSDARG00000059553	sympk	88	74.182	ENSCJAG00000012172	SYMPK	98	72.667	Callithrix_jacchus
ENSDARG00000059553	sympk	89	73.429	ENSCAFG00000004376	SYMPK	94	69.130	Canis_familiaris
ENSDARG00000059553	sympk	89	73.429	ENSCAFG00020001815	SYMPK	94	69.130	Canis_lupus_dingo
ENSDARG00000059553	sympk	88	73.727	ENSCHIG00000026784	SYMPK	88	72.144	Capra_hircus
ENSDARG00000059553	sympk	88	73.727	ENSTSYG00000006268	SYMPK	95	72.154	Carlito_syrichta
ENSDARG00000059553	sympk	84	71.834	ENSCAPG00000005112	SYMPK	95	71.834	Cavia_aperea
ENSDARG00000059553	sympk	88	74.091	ENSCPOG00000010434	SYMPK	88	74.091	Cavia_porcellus
ENSDARG00000059553	sympk	88	74.273	ENSCCAG00000036309	SYMPK	98	74.175	Cebus_capucinus
ENSDARG00000059553	sympk	91	72.290	ENSCATG00000045107	SYMPK	98	74.151	Cercocebus_atys
ENSDARG00000059553	sympk	89	73.556	ENSCLAG00000001206	SYMPK	86	74.000	Chinchilla_lanigera
ENSDARG00000059553	sympk	88	74.182	ENSCSAG00000003115	SYMPK	88	72.496	Chlorocebus_sabaeus
ENSDARG00000059553	sympk	69	90.909	ENSCHOG00000012456	SYMPK	79	90.909	Choloepus_hoffmanni
ENSDARG00000059553	sympk	88	72.890	ENSCPBG00000007170	SYMPK	90	71.880	Chrysemys_picta_bellii
ENSDARG00000059553	sympk	85	47.388	ENSCING00000021232	-	97	47.575	Ciona_intestinalis
ENSDARG00000059553	sympk	83	46.960	ENSCSAVG00000005154	-	99	47.691	Ciona_savignyi
ENSDARG00000059553	sympk	91	71.690	ENSCANG00000040907	SYMPK	98	72.846	Colobus_angolensis_palliatus
ENSDARG00000059553	sympk	83	72.904	ENSCGRG00001010086	Sympk	92	66.667	Cricetulus_griseus_chok1gshd
ENSDARG00000059553	sympk	88	82.049	ENSCSEG00000016802	sympk	97	77.063	Cynoglossus_semilaevis
ENSDARG00000059553	sympk	88	73.636	ENSDNOG00000016149	SYMPK	87	71.968	Dasypus_novemcinctus
ENSDARG00000059553	sympk	86	36.947	FBgn0037371	Sym	98	36.348	Drosophila_melanogaster
ENSDARG00000059553	sympk	68	60.093	ENSEBUG00000000387	sympk	87	60.685	Eptatretus_burgeri
ENSDARG00000059553	sympk	89	73.339	ENSEASG00005014227	SYMPK	89	71.701	Equus_asinus_asinus
ENSDARG00000059553	sympk	89	73.339	ENSECAG00000008163	SYMPK	89	71.701	Equus_caballus
ENSDARG00000059553	sympk	70	73.259	ENSEEUG00000000270	-	81	73.259	Erinaceus_europaeus
ENSDARG00000059553	sympk	99	75.568	ENSELUG00000000850	sympk	97	76.948	Esox_lucius
ENSDARG00000059553	sympk	92	71.306	ENSFCAG00000007337	SYMPK	89	71.813	Felis_catus
ENSDARG00000059553	sympk	88	73.818	ENSFDAG00000011272	SYMPK	88	71.968	Fukomys_damarensis
ENSDARG00000059553	sympk	88	83.120	ENSFHEG00000010274	sympk	97	78.027	Fundulus_heteroclitus
ENSDARG00000059553	sympk	86	80.242	ENSGMOG00000002357	sympk	99	80.336	Gadus_morhua
ENSDARG00000059553	sympk	87	82.721	ENSGAFG00000010976	sympk	97	76.917	Gambusia_affinis
ENSDARG00000059553	sympk	99	74.681	ENSGACG00000002735	sympk	97	81.860	Gasterosteus_aculeatus
ENSDARG00000059553	sympk	56	71.162	ENSGAGG00000012538	-	88	71.125	Gopherus_agassizii
ENSDARG00000059553	sympk	88	74.091	ENSGGOG00000003410	SYMPK	96	73.798	Gorilla_gorilla
ENSDARG00000059553	sympk	89	82.178	ENSHBUG00000023564	sympk	98	77.157	Haplochromis_burtoni
ENSDARG00000059553	sympk	88	70.364	ENSHGLG00000005228	SYMPK	88	68.805	Heterocephalus_glaber_female
ENSDARG00000059553	sympk	99	68.442	ENSHGLG00100018571	SYMPK	92	71.441	Heterocephalus_glaber_male
ENSDARG00000059553	sympk	86	77.737	ENSHCOG00000017400	sympk	96	73.639	Hippocampus_comes
ENSDARG00000059553	sympk	99	77.858	ENSIPUG00000024020	SYMPK	97	79.689	Ictalurus_punctatus
ENSDARG00000059553	sympk	88	74.364	ENSSTOG00000001534	SYMPK	88	72.496	Ictidomys_tridecemlineatus
ENSDARG00000059553	sympk	88	74.273	ENSJJAG00000006633	Sympk	86	74.273	Jaculus_jaculus
ENSDARG00000059553	sympk	99	75.543	ENSKMAG00000016292	sympk	98	77.705	Kryptolebias_marmoratus
ENSDARG00000059553	sympk	88	82.396	ENSLBEG00000027913	sympk	96	78.997	Labrus_bergylta
ENSDARG00000059553	sympk	88	68.336	ENSLACG00000016497	SYMPK	92	68.683	Latimeria_chalumnae
ENSDARG00000059553	sympk	88	74.000	ENSLAFG00000008726	SYMPK	88	71.889	Loxodonta_africana
ENSDARG00000059553	sympk	88	74.182	ENSMMUG00000015428	SYMPK	93	72.565	Macaca_mulatta
ENSDARG00000059553	sympk	91	72.583	ENSMNEG00000019439	SYMPK	98	74.245	Macaca_nemestrina
ENSDARG00000059553	sympk	91	72.408	ENSMLEG00000040508	SYMPK	98	74.151	Mandrillus_leucophaeus
ENSDARG00000059553	sympk	98	77.669	ENSMAMG00000010486	sympk	97	78.275	Mastacembelus_armatus
ENSDARG00000059553	sympk	89	82.088	ENSMZEG00005014146	sympk	98	77.075	Maylandia_zebra
ENSDARG00000059553	sympk	86	74.026	ENSMAUG00000015657	Sympk	84	74.026	Mesocricetus_auratus
ENSDARG00000059553	sympk	88	73.818	ENSMICG00000001871	SYMPK	90	72.594	Microcebus_murinus
ENSDARG00000059553	sympk	89	73.256	ENSMOCG00000008388	Sympk	88	72.150	Microtus_ochrogaster
ENSDARG00000059553	sympk	92	78.276	ENSMMOG00000019227	sympk	98	78.276	Mola_mola
ENSDARG00000059553	sympk	88	73.274	ENSMODG00000021534	SYMPK	97	67.652	Monodelphis_domestica
ENSDARG00000059553	sympk	76	77.287	ENSMALG00000008347	sympk	97	77.603	Monopterus_albus
ENSDARG00000059553	sympk	89	73.256	MGP_CAROLIEiJ_G0029267	Sympk	77	85.321	Mus_caroli
ENSDARG00000059553	sympk	89	73.166	ENSMUSG00000023118	Sympk	76	85.321	Mus_musculus
ENSDARG00000059553	sympk	89	73.345	MGP_PahariEiJ_G0021127	Sympk	77	85.321	Mus_pahari
ENSDARG00000059553	sympk	89	73.256	MGP_SPRETEiJ_G0030351	-	77	85.321	Mus_spretus
ENSDARG00000059553	sympk	89	71.993	ENSMPUG00000005505	SYMPK	89	70.399	Mustela_putorius_furo
ENSDARG00000059553	sympk	71	70.641	ENSMLUG00000001359	SYMPK	91	68.230	Myotis_lucifugus
ENSDARG00000059553	sympk	88	73.727	ENSNGAG00000000820	Sympk	88	71.715	Nannospalax_galili
ENSDARG00000059553	sympk	86	82.710	ENSNBRG00000018101	sympk	96	78.865	Neolamprologus_brichardi
ENSDARG00000059553	sympk	88	63.348	ENSNLEG00000002369	SYMPK	87	62.030	Nomascus_leucogenys
ENSDARG00000059553	sympk	80	64.334	ENSMEUG00000003866	SYMPK	77	64.334	Notamacropus_eugenii
ENSDARG00000059553	sympk	88	72.182	ENSOPRG00000009967	SYMPK	88	70.087	Ochotona_princeps
ENSDARG00000059553	sympk	91	72.320	ENSODEG00000007519	SYMPK	88	72.320	Octodon_degus
ENSDARG00000059553	sympk	91	80.264	ENSONIG00000016802	sympk	99	78.798	Oreochromis_niloticus
ENSDARG00000059553	sympk	76	72.414	ENSOCUG00000005511	SYMPK	89	72.414	Oryctolagus_cuniculus
ENSDARG00000059553	sympk	90	81.150	ENSORLG00000015338	sympk	97	80.942	Oryzias_latipes
ENSDARG00000059553	sympk	99	76.348	ENSORLG00020004402	sympk	98	77.194	Oryzias_latipes_hni
ENSDARG00000059553	sympk	90	81.062	ENSORLG00015005712	sympk	98	77.030	Oryzias_latipes_hsok
ENSDARG00000059553	sympk	95	78.752	ENSOMEG00000022561	sympk	98	77.549	Oryzias_melastigma
ENSDARG00000059553	sympk	88	74.091	ENSOGAG00000013483	SYMPK	88	72.408	Otolemur_garnettii
ENSDARG00000059553	sympk	87	70.868	ENSOARG00000010349	SYMPK	89	69.143	Ovis_aries
ENSDARG00000059553	sympk	88	74.091	ENSPPAG00000043204	SYMPK	94	72.428	Pan_paniscus
ENSDARG00000059553	sympk	89	73.429	ENSPPRG00000004282	SYMPK	89	71.813	Panthera_pardus
ENSDARG00000059553	sympk	92	71.306	ENSPTIG00000015420	SYMPK	96	71.306	Panthera_tigris_altaica
ENSDARG00000059553	sympk	88	74.091	ENSPTRG00000011169	SYMPK	94	72.428	Pan_troglodytes
ENSDARG00000059553	sympk	88	74.182	ENSPANG00000019930	SYMPK	98	74.151	Papio_anubis
ENSDARG00000059553	sympk	88	83.348	ENSPKIG00000017132	sympk	98	77.742	Paramormyrops_kingsleyae
ENSDARG00000059553	sympk	88	73.909	ENSPEMG00000007564	Sympk	88	71.889	Peromyscus_maniculatus_bairdii
ENSDARG00000059553	sympk	82	63.183	ENSPMAG00000004936	sympk	100	63.279	Petromyzon_marinus
ENSDARG00000059553	sympk	88	72.915	ENSPCIG00000024476	SYMPK	91	70.819	Phascolarctos_cinereus
ENSDARG00000059553	sympk	88	82.166	ENSPFOG00000001194	sympk	97	77.629	Poecilia_formosa
ENSDARG00000059553	sympk	88	82.166	ENSPLAG00000012995	sympk	97	77.326	Poecilia_latipinna
ENSDARG00000059553	sympk	88	82.166	ENSPMEG00000008099	sympk	97	77.126	Poecilia_mexicana
ENSDARG00000059553	sympk	87	82.629	ENSPREG00000006176	sympk	98	77.031	Poecilia_reticulata
ENSDARG00000059553	sympk	88	73.814	ENSPPYG00000010135	SYMPK	98	73.814	Pongo_abelii
ENSDARG00000059553	sympk	82	76.009	ENSPCAG00000005182	SYMPK	82	70.909	Procavia_capensis
ENSDARG00000059553	sympk	91	72.056	ENSPCOG00000023740	SYMPK	98	73.749	Propithecus_coquereli
ENSDARG00000059553	sympk	89	72.262	ENSPVAG00000001355	SYMPK	91	70.660	Pteropus_vampyrus
ENSDARG00000059553	sympk	89	82.358	ENSPNYG00000011455	sympk	98	77.504	Pundamilia_nyererei
ENSDARG00000059553	sympk	98	80.227	ENSPNAG00000016505	sympk	97	80.991	Pygocentrus_nattereri
ENSDARG00000059553	sympk	88	73.909	ENSRNOG00000014353	Sympk	85	73.909	Rattus_norvegicus
ENSDARG00000059553	sympk	91	72.290	ENSRBIG00000040963	SYMPK	98	74.357	Rhinopithecus_bieti
ENSDARG00000059553	sympk	88	74.182	ENSRROG00000024834	SYMPK	96	74.020	Rhinopithecus_roxellana
ENSDARG00000059553	sympk	88	74.182	ENSSBOG00000034497	SYMPK	95	72.428	Saimiri_boliviensis_boliviensis
ENSDARG00000059553	sympk	88	72.389	ENSSHAG00000003139	SYMPK	95	72.389	Sarcophilus_harrisii
ENSDARG00000059553	sympk	99	75.178	ENSSFOG00015006974	sympk	99	75.218	Scleropages_formosus
ENSDARG00000059553	sympk	95	78.378	ENSSMAG00000018130	sympk	77	78.086	Scophthalmus_maximus
ENSDARG00000059553	sympk	99	77.563	ENSSDUG00000007092	sympk	97	78.501	Seriola_dumerili
ENSDARG00000059553	sympk	99	77.724	ENSSLDG00000014774	sympk	96	81.067	Seriola_lalandi_dorsalis
ENSDARG00000059553	sympk	56	82.486	ENSSARG00000004274	-	60	78.462	Sorex_araneus
ENSDARG00000059553	sympk	89	72.207	ENSSPUG00000002789	SYMPK	85	72.207	Sphenodon_punctatus
ENSDARG00000059553	sympk	87	83.318	ENSSPAG00000000854	sympk	97	78.053	Stegastes_partitus
ENSDARG00000059553	sympk	89	73.250	ENSSSCG00000003093	SYMPK	89	71.701	Sus_scrofa
ENSDARG00000059553	sympk	97	76.039	ENSTRUG00000010202	sympk	96	76.725	Takifugu_rubripes
ENSDARG00000059553	sympk	87	81.768	ENSTNIG00000017855	sympk	99	79.332	Tetraodon_nigroviridis
ENSDARG00000059553	sympk	78	86.275	ENSTBEG00000000454	SYMPK	76	86.275	Tupaia_belangeri
ENSDARG00000059553	sympk	89	64.991	ENSTTRG00000014311	SYMPK	89	63.715	Tursiops_truncatus
ENSDARG00000059553	sympk	93	69.072	ENSUAMG00000022272	SYMPK	95	71.429	Ursus_americanus
ENSDARG00000059553	sympk	89	73.519	ENSUMAG00000023698	SYMPK	89	71.899	Ursus_maritimus
ENSDARG00000059553	sympk	89	73.429	ENSVVUG00000003024	SYMPK	96	73.429	Vulpes_vulpes
ENSDARG00000059553	sympk	88	67.000	ENSXETG00000024453	sympk	91	67.423	Xenopus_tropicalis
ENSDARG00000059553	sympk	86	81.406	ENSXCOG00000015368	sympk	100	81.406	Xiphophorus_couchianus
ENSDARG00000059553	sympk	93	78.351	ENSXMAG00000005737	sympk	99	76.144	Xiphophorus_maculatus