EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000059711 (Gene tree)
Gene ID: 334362
Gene Symbol: nol6
Alias: wu:fi43b02
Full Name: nucleolar protein 6 (RNA-associated)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 30598 bases
Position: chr5:50869091-50899688
Accession: ZDB-GENE-030131-6294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000077729	Nrap	PF03813.14	1.9e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000128402	-	1335	-	ENSDARP00000105481	444 (aa)	-	E7F5S6
ENSDART00000083294	-	6414	-	ENSDARP00000077729	1153 (aa)	-	F1Q4S6

Gene Model

Click here to download ENSDARG00000059711's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000059711's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000059711	nol6	98	53.451	ENSG00000165271	NOL6	100	53.960	Homo_sapiens
ENSDARG00000059711	nol6	96	69.991	ENSAPOG00000002135	nol6	97	69.991	Acanthochromis_polyacanthus
ENSDARG00000059711	nol6	95	54.265	ENSAMEG00000007364	NOL6	97	53.280	Ailuropoda_melanoleuca
ENSDARG00000059711	nol6	98	69.850	ENSACIG00000018888	nol6	99	69.850	Amphilophus_citrinellus
ENSDARG00000059711	nol6	98	67.314	ENSAOCG00000006894	nol6	99	67.314	Amphiprion_ocellaris
ENSDARG00000059711	nol6	84	68.340	ENSAOCG00000002591	NOL6	97	71.221	Amphiprion_ocellaris
ENSDARG00000059711	nol6	95	69.573	ENSAPEG00000017733	nol6	100	69.573	Amphiprion_percula
ENSDARG00000059711	nol6	94	70.534	ENSATEG00000003713	nol6	98	70.534	Anabas_testudineus
ENSDARG00000059711	nol6	92	54.368	ENSAPLG00000003837	NOL6	100	54.368	Anas_platyrhynchos
ENSDARG00000059711	nol6	96	57.066	ENSACAG00000012749	-	100	56.327	Anolis_carolinensis
ENSDARG00000059711	nol6	98	53.457	ENSANAG00000019320	NOL6	99	53.457	Aotus_nancymaae
ENSDARG00000059711	nol6	98	69.673	ENSACLG00000006141	nol6	98	69.673	Astatotilapia_calliptera
ENSDARG00000059711	nol6	99	72.656	ENSAMXG00000007881	nol6	99	72.656	Astyanax_mexicanus
ENSDARG00000059711	nol6	98	53.014	ENSBTAG00000003323	NOL6	98	53.014	Bos_taurus
ENSDARG00000059711	nol6	99	53.122	ENSCJAG00000008222	NOL6	100	54.715	Callithrix_jacchus
ENSDARG00000059711	nol6	95	54.446	ENSCAFG00000001869	NOL6	98	53.915	Canis_familiaris
ENSDARG00000059711	nol6	95	54.208	ENSCAFG00020015767	NOL6	99	53.682	Canis_lupus_dingo
ENSDARG00000059711	nol6	98	52.660	ENSCHIG00000011813	NOL6	98	52.660	Capra_hircus
ENSDARG00000059711	nol6	98	53.684	ENSTSYG00000008125	NOL6	99	53.684	Carlito_syrichta
ENSDARG00000059711	nol6	95	49.093	ENSCAPG00000011587	NOL6	97	49.093	Cavia_aperea
ENSDARG00000059711	nol6	95	52.995	ENSCPOG00000012282	NOL6	96	52.995	Cavia_porcellus
ENSDARG00000059711	nol6	98	53.457	ENSCCAG00000022349	NOL6	98	53.457	Cebus_capucinus
ENSDARG00000059711	nol6	98	53.451	ENSCATG00000031690	NOL6	98	53.451	Cercocebus_atys
ENSDARG00000059711	nol6	86	55.956	ENSCLAG00000002096	NOL6	97	55.956	Chinchilla_lanigera
ENSDARG00000059711	nol6	98	53.363	ENSCSAG00000009990	NOL6	98	53.363	Chlorocebus_sabaeus
ENSDARG00000059711	nol6	99	56.294	ENSCPBG00000005864	NOL6	99	56.294	Chrysemys_picta_bellii
ENSDARG00000059711	nol6	95	36.109	ENSCSAVG00000003332	-	100	36.109	Ciona_savignyi
ENSDARG00000059711	nol6	97	53.381	ENSCANG00000017993	NOL6	98	53.381	Colobus_angolensis_palliatus
ENSDARG00000059711	nol6	96	52.788	ENSCGRG00001020245	Nol6	97	52.788	Cricetulus_griseus_chok1gshd
ENSDARG00000059711	nol6	88	56.066	ENSCGRG00000014588	Nol6	96	56.066	Cricetulus_griseus_crigri
ENSDARG00000059711	nol6	96	69.964	ENSCVAG00000019497	nol6	97	69.964	Cyprinodon_variegatus
ENSDARG00000059711	nol6	99	49.344	ENSDNOG00000003382	NOL6	98	49.344	Dasypus_novemcinctus
ENSDARG00000059711	nol6	99	52.460	ENSDORG00000006018	Nol6	99	52.460	Dipodomys_ordii
ENSDARG00000059711	nol6	94	31.467	FBgn0261286	Mat89Ba	88	31.867	Drosophila_melanogaster
ENSDARG00000059711	nol6	78	54.391	ENSETEG00000003875	NOL6	79	54.391	Echinops_telfairi
ENSDARG00000059711	nol6	88	36.471	ENSEBUG00000005711	nol6	92	36.601	Eptatretus_burgeri
ENSDARG00000059711	nol6	95	54.265	ENSEASG00005004206	NOL6	98	53.369	Equus_asinus_asinus
ENSDARG00000059711	nol6	95	54.265	ENSECAG00000007914	NOL6	98	53.369	Equus_caballus
ENSDARG00000059711	nol6	98	70.459	ENSELUG00000017818	nol6	99	70.459	Esox_lucius
ENSDARG00000059711	nol6	95	54.356	ENSFCAG00000006677	NOL6	96	54.356	Felis_catus
ENSDARG00000059711	nol6	84	57.306	ENSFALG00000009997	NOL6	100	57.306	Ficedula_albicollis
ENSDARG00000059711	nol6	98	52.305	ENSFDAG00000009930	NOL6	98	52.305	Fukomys_damarensis
ENSDARG00000059711	nol6	99	67.389	ENSFHEG00000007788	nol6	99	67.389	Fundulus_heteroclitus
ENSDARG00000059711	nol6	96	69.550	ENSGMOG00000000637	nol6	98	69.550	Gadus_morhua
ENSDARG00000059711	nol6	95	56.961	ENSGALG00000030730	NOL6	99	55.761	Gallus_gallus
ENSDARG00000059711	nol6	99	67.823	ENSGAFG00000009378	nol6	99	67.823	Gambusia_affinis
ENSDARG00000059711	nol6	98	67.785	ENSGACG00000010296	nol6	99	67.785	Gasterosteus_aculeatus
ENSDARG00000059711	nol6	98	56.206	ENSGAGG00000019996	NOL6	99	56.206	Gopherus_agassizii
ENSDARG00000059711	nol6	98	53.097	ENSGGOG00000003997	NOL6	98	53.097	Gorilla_gorilla
ENSDARG00000059711	nol6	98	69.673	ENSHBUG00000010058	nol6	98	69.673	Haplochromis_burtoni
ENSDARG00000059711	nol6	98	52.216	ENSHGLG00000009478	NOL6	97	52.216	Heterocephalus_glaber_female
ENSDARG00000059711	nol6	98	52.216	ENSHGLG00100014962	NOL6	97	52.216	Heterocephalus_glaber_male
ENSDARG00000059711	nol6	96	65.268	ENSHCOG00000020017	nol6	99	65.268	Hippocampus_comes
ENSDARG00000059711	nol6	99	74.566	ENSIPUG00000018266	nol6	99	74.566	Ictalurus_punctatus
ENSDARG00000059711	nol6	97	53.387	ENSSTOG00000015854	NOL6	97	53.387	Ictidomys_tridecemlineatus
ENSDARG00000059711	nol6	96	52.154	ENSJJAG00000024225	Nol6	99	51.576	Jaculus_jaculus
ENSDARG00000059711	nol6	97	69.616	ENSKMAG00000004749	nol6	99	69.616	Kryptolebias_marmoratus
ENSDARG00000059711	nol6	98	67.639	ENSLBEG00000006902	nol6	99	67.639	Labrus_bergylta
ENSDARG00000059711	nol6	72	48.862	ENSLACG00000006368	NOL6	99	48.862	Latimeria_chalumnae
ENSDARG00000059711	nol6	96	58.729	ENSLOCG00000004991	nol6	100	58.084	Lepisosteus_oculatus
ENSDARG00000059711	nol6	99	52.581	ENSLAFG00000004990	NOL6	98	52.581	Loxodonta_africana
ENSDARG00000059711	nol6	98	53.363	ENSMFAG00000040117	NOL6	98	53.363	Macaca_fascicularis
ENSDARG00000059711	nol6	98	53.363	ENSMMUG00000000389	NOL6	99	53.363	Macaca_mulatta
ENSDARG00000059711	nol6	98	53.451	ENSMNEG00000040252	NOL6	98	53.451	Macaca_nemestrina
ENSDARG00000059711	nol6	98	53.363	ENSMLEG00000043468	NOL6	98	53.363	Mandrillus_leucophaeus
ENSDARG00000059711	nol6	96	70.541	ENSMAMG00000011484	nol6	97	70.541	Mastacembelus_armatus
ENSDARG00000059711	nol6	98	69.761	ENSMZEG00005014058	nol6	98	69.761	Maylandia_zebra
ENSDARG00000059711	nol6	88	47.449	ENSMGAG00000016978	NOL6	100	47.449	Meleagris_gallopavo
ENSDARG00000059711	nol6	62	50.978	ENSMAUG00000010790	Nol6	100	50.978	Mesocricetus_auratus
ENSDARG00000059711	nol6	98	53.369	ENSMICG00000012157	NOL6	98	53.369	Microcebus_murinus
ENSDARG00000059711	nol6	99	52.548	ENSMOCG00000010981	Nol6	98	52.548	Microtus_ochrogaster
ENSDARG00000059711	nol6	99	69.878	ENSMMOG00000005625	nol6	99	69.878	Mola_mola
ENSDARG00000059711	nol6	96	53.501	ENSMODG00000003802	NOL6	95	53.501	Monodelphis_domestica
ENSDARG00000059711	nol6	99	68.142	ENSMALG00000009130	nol6	99	68.142	Monopterus_albus
ENSDARG00000059711	nol6	97	51.740	MGP_CAROLIEiJ_G0025907	Nol6	98	51.740	Mus_caroli
ENSDARG00000059711	nol6	97	51.740	ENSMUSG00000028430	Nol6	97	51.740	Mus_musculus
ENSDARG00000059711	nol6	97	52.186	MGP_PahariEiJ_G0024030	Nol6	98	52.186	Mus_pahari
ENSDARG00000059711	nol6	97	51.650	MGP_SPRETEiJ_G0026855	Nol6	97	51.650	Mus_spretus
ENSDARG00000059711	nol6	95	52.670	ENSMPUG00000003922	NOL6	97	51.933	Mustela_putorius_furo
ENSDARG00000059711	nol6	95	53.520	ENSMLUG00000003230	NOL6	97	52.879	Myotis_lucifugus
ENSDARG00000059711	nol6	97	52.542	ENSNGAG00000017803	Nol6	96	52.542	Nannospalax_galili
ENSDARG00000059711	nol6	96	70.514	ENSNBRG00000001435	nol6	97	70.514	Neolamprologus_brichardi
ENSDARG00000059711	nol6	95	51.755	ENSNLEG00000005056	NOL6	96	51.845	Nomascus_leucogenys
ENSDARG00000059711	nol6	98	51.862	ENSMEUG00000004232	NOL6	99	51.862	Notamacropus_eugenii
ENSDARG00000059711	nol6	98	51.152	ENSOPRG00000016817	NOL6	99	51.152	Ochotona_princeps
ENSDARG00000059711	nol6	97	52.305	ENSODEG00000015856	NOL6	97	52.305	Octodon_degus
ENSDARG00000059711	nol6	99	68.924	ENSONIG00000015951	nol6	99	68.924	Oreochromis_niloticus
ENSDARG00000059711	nol6	67	65.217	ENSOANG00000010217	-	97	43.131	Ornithorhynchus_anatinus
ENSDARG00000059711	nol6	95	54.083	ENSOCUG00000026918	NOL6	97	53.689	Oryctolagus_cuniculus
ENSDARG00000059711	nol6	96	68.468	ENSORLG00000010159	nol6	98	68.468	Oryzias_latipes
ENSDARG00000059711	nol6	96	68.378	ENSORLG00015023273	nol6	97	68.378	Oryzias_latipes_hsok
ENSDARG00000059711	nol6	96	69.640	ENSOMEG00000006877	nol6	97	69.640	Oryzias_melastigma
ENSDARG00000059711	nol6	98	53.216	ENSOGAG00000014354	NOL6	99	53.216	Otolemur_garnettii
ENSDARG00000059711	nol6	98	52.381	ENSOARG00000009424	NOL6	98	52.381	Ovis_aries
ENSDARG00000059711	nol6	98	53.363	ENSPPAG00000040840	NOL6	98	53.363	Pan_paniscus
ENSDARG00000059711	nol6	95	54.174	ENSPPRG00000003583	NOL6	96	54.174	Panthera_pardus
ENSDARG00000059711	nol6	95	54.083	ENSPTIG00000002752	NOL6	96	54.083	Panthera_tigris_altaica
ENSDARG00000059711	nol6	98	53.363	ENSPTRG00000020861	NOL6	98	53.363	Pan_troglodytes
ENSDARG00000059711	nol6	98	53.274	ENSPANG00000025310	NOL6	99	53.076	Papio_anubis
ENSDARG00000059711	nol6	100	67.990	ENSPKIG00000011418	nol6	100	67.990	Paramormyrops_kingsleyae
ENSDARG00000059711	nol6	96	54.874	ENSPSIG00000014763	NOL6	98	53.954	Pelodiscus_sinensis
ENSDARG00000059711	nol6	96	67.719	ENSPMGG00000015119	nol6	99	67.719	Periophthalmus_magnuspinnatus
ENSDARG00000059711	nol6	98	52.618	ENSPEMG00000011998	Nol6	97	52.618	Peromyscus_maniculatus_bairdii
ENSDARG00000059711	nol6	98	53.239	ENSPCIG00000029061	NOL6	99	53.239	Phascolarctos_cinereus
ENSDARG00000059711	nol6	99	67.216	ENSPFOG00000003825	nol6	99	67.216	Poecilia_formosa
ENSDARG00000059711	nol6	99	67.736	ENSPLAG00000001410	nol6	99	67.736	Poecilia_latipinna
ENSDARG00000059711	nol6	99	67.042	ENSPMEG00000021561	nol6	99	67.042	Poecilia_mexicana
ENSDARG00000059711	nol6	99	66.956	ENSPREG00000004807	nol6	99	66.956	Poecilia_reticulata
ENSDARG00000059711	nol6	98	53.045	ENSPPYG00000019133	NOL6	98	53.045	Pongo_abelii
ENSDARG00000059711	nol6	98	53.989	ENSPCOG00000019262	NOL6	98	53.989	Propithecus_coquereli
ENSDARG00000059711	nol6	99	50.527	ENSPVAG00000011487	NOL6	99	50.527	Pteropus_vampyrus
ENSDARG00000059711	nol6	96	70.631	ENSPNYG00000020726	nol6	97	70.631	Pundamilia_nyererei
ENSDARG00000059711	nol6	99	73.943	ENSPNAG00000028102	nol6	99	74.459	Pygocentrus_nattereri
ENSDARG00000059711	nol6	96	51.709	ENSRNOG00000010409	Nol6	97	51.709	Rattus_norvegicus
ENSDARG00000059711	nol6	98	50.920	ENSRBIG00000016646	NOL6	97	52.201	Rhinopithecus_bieti
ENSDARG00000059711	nol6	98	53.009	ENSRROG00000039046	NOL6	98	53.009	Rhinopithecus_roxellana
ENSDARG00000059711	nol6	98	53.812	ENSSBOG00000029525	NOL6	99	53.812	Saimiri_boliviensis_boliviensis
ENSDARG00000059711	nol6	98	53.462	ENSSHAG00000004050	NOL6	99	53.462	Sarcophilus_harrisii
ENSDARG00000059711	nol6	96	71.351	ENSSFOG00015016052	nol6	99	69.497	Scleropages_formosus
ENSDARG00000059711	nol6	97	70.072	ENSSMAG00000008757	nol6	99	68.975	Scophthalmus_maximus
ENSDARG00000059711	nol6	99	69.444	ENSSDUG00000016772	nol6	99	69.792	Seriola_dumerili
ENSDARG00000059711	nol6	99	69.271	ENSSLDG00000017046	nol6	99	69.618	Seriola_lalandi_dorsalis
ENSDARG00000059711	nol6	86	56.077	ENSSARG00000010381	NOL6	86	56.077	Sorex_araneus
ENSDARG00000059711	nol6	97	54.700	ENSSPUG00000008506	NOL6	97	54.700	Sphenodon_punctatus
ENSDARG00000059711	nol6	99	68.663	ENSSPAG00000005542	nol6	99	68.663	Stegastes_partitus
ENSDARG00000059711	nol6	98	53.169	ENSSSCG00000010990	NOL6	99	53.169	Sus_scrofa
ENSDARG00000059711	nol6	95	56.621	ENSTGUG00000001674	NOL6	99	56.557	Taeniopygia_guttata
ENSDARG00000059711	nol6	96	70.090	ENSTRUG00000005694	nol6	97	70.090	Takifugu_rubripes
ENSDARG00000059711	nol6	96	68.851	ENSTNIG00000003826	nol6	99	68.851	Tetraodon_nigroviridis
ENSDARG00000059711	nol6	83	49.948	ENSTBEG00000003239	NOL6	85	49.948	Tupaia_belangeri
ENSDARG00000059711	nol6	88	53.659	ENSTTRG00000010584	NOL6	90	53.659	Tursiops_truncatus
ENSDARG00000059711	nol6	98	53.322	ENSUAMG00000025594	NOL6	98	56.908	Ursus_americanus
ENSDARG00000059711	nol6	95	54.356	ENSUMAG00000006051	NOL6	98	53.922	Ursus_maritimus
ENSDARG00000059711	nol6	95	54.174	ENSVVUG00000021087	NOL6	97	53.648	Vulpes_vulpes
ENSDARG00000059711	nol6	99	50.699	ENSXETG00000002153	nol6	99	50.699	Xenopus_tropicalis
ENSDARG00000059711	nol6	99	67.446	ENSXMAG00000019408	nol6	99	67.841	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0006409	tRNA export from nucleus	21873635.	IBA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0032545	CURI complex	21873635.	IBA	Component
GO:0034456	UTP-C complex	21873635.	IBA	Component