EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000059768 (Gene tree)
Gene ID: 565404
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G patch domain containing 8
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 37549 bases
Position: chr3:37662444-37699992
Accession: ZDB-GENE-030131-6966
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000155610	zf-C2H2_jaz	PF12171.8	4.6e-06	1	1
ENSDARP00000125720	zf-C2H2_jaz	PF12171.8	4.8e-06	1	1
ENSDARP00000125720	G-patch	PF01585.23	2.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000151745	-	572	-	-	- (aa)	-	-
ENSDART00000151810	-	569	-	ENSDARP00000126277	46 (aa)	-	I3ITK6
ENSDART00000185858	-	4393	XM_005164156	ENSDARP00000155610	1435 (aa)	XP_005164213	A0A2R8RXW4
ENSDART00000151369	-	421	-	-	- (aa)	-	-
ENSDART00000151193	-	7025	-	ENSDARP00000125720	1498 (aa)	-	I3IS56

Gene Model

Click here to download ENSDARG00000059768's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000059768's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000059768	gpatch8	56	59.703	ENSAPOG00000023938	gpatch8	100	64.253	Acanthochromis_polyacanthus
ENSDARG00000059768	gpatch8	56	60.417	ENSAOCG00000018102	gpatch8	100	64.295	Amphiprion_ocellaris
ENSDARG00000059768	gpatch8	56	60.532	ENSAPEG00000016776	gpatch8	100	64.444	Amphiprion_percula
ENSDARG00000059768	gpatch8	56	59.400	ENSATEG00000003247	gpatch8	100	63.796	Anabas_testudineus
ENSDARG00000059768	gpatch8	56	61.343	ENSACLG00000004165	gpatch8	100	64.128	Astatotilapia_calliptera
ENSDARG00000059768	gpatch8	59	65.892	ENSAMXG00000041683	gpatch8	100	69.090	Astyanax_mexicanus
ENSDARG00000059768	gpatch8	55	59.390	ENSCSEG00000021277	gpatch8	100	62.736	Cynoglossus_semilaevis
ENSDARG00000059768	gpatch8	56	61.047	ENSCVAG00000013477	gpatch8	100	63.312	Cyprinodon_variegatus
ENSDARG00000059768	gpatch8	96	58.694	ENSELUG00000019920	gpatch8	100	61.661	Esox_lucius
ENSDARG00000059768	gpatch8	56	58.995	ENSFHEG00000005791	gpatch8	100	62.370	Fundulus_heteroclitus
ENSDARG00000059768	gpatch8	55	60.397	ENSGAFG00000018138	gpatch8	100	63.761	Gambusia_affinis
ENSDARG00000059768	gpatch8	56	62.153	ENSHBUG00000002669	gpatch8	100	64.146	Haplochromis_burtoni
ENSDARG00000059768	gpatch8	74	58.591	ENSHGLG00100010738	GPATCH8	87	58.204	Heterocephalus_glaber_male
ENSDARG00000059768	gpatch8	60	67.495	ENSIPUG00000015431	gpatch8	100	69.380	Ictalurus_punctatus
ENSDARG00000059768	gpatch8	56	60.070	ENSLBEG00000023352	gpatch8	100	63.388	Labrus_bergylta
ENSDARG00000059768	gpatch8	56	60.895	ENSMAMG00000001618	gpatch8	100	64.145	Mastacembelus_armatus
ENSDARG00000059768	gpatch8	56	61.574	ENSMZEG00005022584	gpatch8	100	64.062	Maylandia_zebra
ENSDARG00000059768	gpatch8	56	59.447	ENSMMOG00000020472	gpatch8	100	64.740	Mola_mola
ENSDARG00000059768	gpatch8	56	62.065	ENSMALG00000004204	gpatch8	100	63.553	Monopterus_albus
ENSDARG00000059768	gpatch8	50	63.006	ENSMLUG00000013840	GPATCH8	53	62.048	Myotis_lucifugus
ENSDARG00000059768	gpatch8	56	61.432	ENSNBRG00000016402	gpatch8	100	63.867	Neolamprologus_brichardi
ENSDARG00000059768	gpatch8	56	58.953	ENSONIG00000001292	gpatch8	100	61.209	Oreochromis_niloticus
ENSDARG00000059768	gpatch8	56	58.514	ENSORLG00000028497	gpatch8	100	61.578	Oryzias_latipes
ENSDARG00000059768	gpatch8	57	59.046	ENSORLG00020006656	gpatch8	100	60.779	Oryzias_latipes_hni
ENSDARG00000059768	gpatch8	56	58.057	ENSORLG00015019797	gpatch8	100	61.154	Oryzias_latipes_hsok
ENSDARG00000059768	gpatch8	56	58.276	ENSOMEG00000023809	gpatch8	100	61.809	Oryzias_melastigma
ENSDARG00000059768	gpatch8	52	55.250	ENSPKIG00000018753	gpatch8	56	54.032	Paramormyrops_kingsleyae
ENSDARG00000059768	gpatch8	50	66.957	ENSPSIG00000006255	GPATCH8	70	53.502	Pelodiscus_sinensis
ENSDARG00000059768	gpatch8	55	59.929	ENSPFOG00000014833	gpatch8	100	63.144	Poecilia_formosa
ENSDARG00000059768	gpatch8	55	60.165	ENSPLAG00000001035	gpatch8	100	63.144	Poecilia_latipinna
ENSDARG00000059768	gpatch8	55	60.142	ENSPMEG00000024032	gpatch8	100	64.081	Poecilia_mexicana
ENSDARG00000059768	gpatch8	55	60.539	ENSPREG00000008911	gpatch8	61	59.072	Poecilia_reticulata
ENSDARG00000059768	gpatch8	56	61.690	ENSPNYG00000009426	gpatch8	100	64.016	Pundamilia_nyererei
ENSDARG00000059768	gpatch8	59	69.499	ENSPNAG00000016200	gpatch8	96	67.862	Pygocentrus_nattereri
ENSDARG00000059768	gpatch8	87	61.710	ENSSFOG00015004299	GPATCH8	94	61.338	Scleropages_formosus
ENSDARG00000059768	gpatch8	55	55.128	ENSSFOG00015021377	-	55	55.336	Scleropages_formosus
ENSDARG00000059768	gpatch8	54	58.500	ENSSDUG00000018065	gpatch8	100	63.080	Seriola_dumerili
ENSDARG00000059768	gpatch8	56	61.789	ENSSLDG00000009225	gpatch8	100	64.932	Seriola_lalandi_dorsalis
ENSDARG00000059768	gpatch8	56	59.127	ENSSPAG00000011368	gpatch8	100	64.141	Stegastes_partitus
ENSDARG00000059768	gpatch8	56	56.407	ENSTRUG00000020474	gpatch8	100	61.104	Takifugu_rubripes
ENSDARG00000059768	gpatch8	61	61.338	ENSTBEG00000009486	GPATCH8	59	59.925	Tupaia_belangeri
ENSDARG00000059768	gpatch8	55	60.441	ENSXCOG00000016680	gpatch8	100	63.114	Xiphophorus_couchianus
ENSDARG00000059768	gpatch8	55	60.768	ENSXMAG00000009217	gpatch8	100	63.154	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function