EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000059887 (Gene tree)
Gene ID: 569087
Gene Symbol: eral1
Alias: si:ch211-207c6.1
Full Name: Era-like 12S mitochondrial rRNA chaperone 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 11112 bases
Position: chr5:42258994-42270105
Accession: ZDB-GENE-060526-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000078213	KH_2	PF07650.17	2.2e-07	1	1
ENSDARP00000078213	MMR_HSR1	PF01926.23	3.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000140295	-	527	-	-	- (aa)	-	-
ENSDART00000143738	-	601	-	-	- (aa)	-	-
ENSDART00000083778	-	1754	-	ENSDARP00000078213	447 (aa)	-	B0S6U7
ENSDART00000138908	-	810	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000059887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000059887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000059887	eral1	87	51.671	ENSG00000132591	ERAL1	99	48.101	Homo_sapiens
ENSDARG00000059887	eral1	100	57.424	ENSAPOG00000000093	eral1	100	57.424	Acanthochromis_polyacanthus
ENSDARG00000059887	eral1	84	51.862	ENSAMEG00000004602	ERAL1	83	51.862	Ailuropoda_melanoleuca
ENSDARG00000059887	eral1	89	62.935	ENSACIG00000011545	eral1	90	62.935	Amphilophus_citrinellus
ENSDARG00000059887	eral1	100	58.043	ENSAOCG00000014398	eral1	100	58.043	Amphiprion_ocellaris
ENSDARG00000059887	eral1	100	58.478	ENSAPEG00000015466	eral1	100	58.478	Amphiprion_percula
ENSDARG00000059887	eral1	100	56.926	ENSATEG00000005857	eral1	100	56.926	Anabas_testudineus
ENSDARG00000059887	eral1	75	50.806	ENSAPLG00000014894	ERAL1	99	50.806	Anas_platyrhynchos
ENSDARG00000059887	eral1	86	49.871	ENSANAG00000022216	-	82	50.266	Aotus_nancymaae
ENSDARG00000059887	eral1	50	50.602	ENSANAG00000020670	-	99	50.602	Aotus_nancymaae
ENSDARG00000059887	eral1	100	60.398	ENSACLG00000006437	eral1	100	60.398	Astatotilapia_calliptera
ENSDARG00000059887	eral1	100	58.672	ENSAMXG00000037957	eral1	100	59.740	Astyanax_mexicanus
ENSDARG00000059887	eral1	84	53.704	ENSBTAG00000015639	ERAL1	83	53.704	Bos_taurus
ENSDARG00000059887	eral1	84	51.862	ENSCJAG00000045605	ERAL1	83	51.862	Callithrix_jacchus
ENSDARG00000059887	eral1	86	51.157	ENSCAFG00000018813	ERAL1	85	51.157	Canis_familiaris
ENSDARG00000059887	eral1	86	51.157	ENSCAFG00020011718	ERAL1	85	51.157	Canis_lupus_dingo
ENSDARG00000059887	eral1	84	54.450	ENSCHIG00000021850	ERAL1	83	54.450	Capra_hircus
ENSDARG00000059887	eral1	86	50.518	ENSTSYG00000007492	ERAL1	85	50.518	Carlito_syrichta
ENSDARG00000059887	eral1	87	50.643	ENSCPOG00000009576	ERAL1	86	50.643	Cavia_porcellus
ENSDARG00000059887	eral1	56	49.206	ENSCCAG00000031032	-	99	47.619	Cebus_capucinus
ENSDARG00000059887	eral1	84	51.862	ENSCCAG00000036226	-	83	51.862	Cebus_capucinus
ENSDARG00000059887	eral1	87	51.671	ENSCATG00000041378	ERAL1	85	51.671	Cercocebus_atys
ENSDARG00000059887	eral1	77	51.895	ENSCLAG00000004778	ERAL1	99	60.448	Chinchilla_lanigera
ENSDARG00000059887	eral1	86	52.208	ENSCSAG00000007105	ERAL1	84	52.208	Chlorocebus_sabaeus
ENSDARG00000059887	eral1	93	50.109	ENSCPBG00000020222	ERAL1	88	50.109	Chrysemys_picta_bellii
ENSDARG00000059887	eral1	73	32.722	ENSCING00000003676	-	89	32.722	Ciona_intestinalis
ENSDARG00000059887	eral1	87	51.928	ENSCANG00000028131	ERAL1	85	51.928	Colobus_angolensis_palliatus
ENSDARG00000059887	eral1	87	51.421	ENSCGRG00001016601	Eral1	85	51.421	Cricetulus_griseus_chok1gshd
ENSDARG00000059887	eral1	87	51.421	ENSCGRG00000002004	Eral1	85	51.421	Cricetulus_griseus_crigri
ENSDARG00000059887	eral1	89	54.271	ENSCSEG00000016147	eral1	93	54.271	Cynoglossus_semilaevis
ENSDARG00000059887	eral1	99	59.211	ENSCVAG00000013714	eral1	99	59.211	Cyprinodon_variegatus
ENSDARG00000059887	eral1	87	52.442	ENSDNOG00000044554	ERAL1	85	52.442	Dasypus_novemcinctus
ENSDARG00000059887	eral1	87	51.399	ENSDORG00000011319	Eral1	86	51.145	Dipodomys_ordii
ENSDARG00000059887	eral1	75	32.641	FBgn0038106	CG7488	83	32.641	Drosophila_melanogaster
ENSDARG00000059887	eral1	60	50.554	ENSETEG00000011551	ERAL1	80	50.554	Echinops_telfairi
ENSDARG00000059887	eral1	81	44.504	ENSEBUG00000004405	eral1	81	44.504	Eptatretus_burgeri
ENSDARG00000059887	eral1	86	51.662	ENSEASG00005009864	ERAL1	85	51.662	Equus_asinus_asinus
ENSDARG00000059887	eral1	86	51.429	ENSECAG00000013325	ERAL1	85	51.429	Equus_caballus
ENSDARG00000059887	eral1	64	50.871	ENSEEUG00000005568	ERAL1	63	50.871	Erinaceus_europaeus
ENSDARG00000059887	eral1	99	54.409	ENSELUG00000021860	eral1	99	54.409	Esox_lucius
ENSDARG00000059887	eral1	87	52.196	ENSFCAG00000005232	ERAL1	85	52.196	Felis_catus
ENSDARG00000059887	eral1	81	52.308	ENSFALG00000006357	ERAL1	99	52.308	Ficedula_albicollis
ENSDARG00000059887	eral1	77	52.770	ENSFDAG00000001767	ERAL1	99	63.433	Fukomys_damarensis
ENSDARG00000059887	eral1	100	57.709	ENSFHEG00000012028	eral1	100	57.709	Fundulus_heteroclitus
ENSDARG00000059887	eral1	64	70.833	ENSGMOG00000014198	eral1	85	68.571	Gadus_morhua
ENSDARG00000059887	eral1	82	49.254	ENSGALG00000003995	ERAL1	87	49.254	Gallus_gallus
ENSDARG00000059887	eral1	100	58.370	ENSGAFG00000013837	eral1	100	58.370	Gambusia_affinis
ENSDARG00000059887	eral1	79	62.079	ENSGACG00000020251	eral1	100	72.857	Gasterosteus_aculeatus
ENSDARG00000059887	eral1	83	52.139	ENSGAGG00000023159	ERAL1	97	52.139	Gopherus_agassizii
ENSDARG00000059887	eral1	65	51.195	ENSGGOG00000015953	ERAL1	75	51.370	Gorilla_gorilla
ENSDARG00000059887	eral1	100	60.398	ENSHBUG00000022014	eral1	100	60.398	Haplochromis_burtoni
ENSDARG00000059887	eral1	81	51.359	ENSHGLG00000009773	ERAL1	80	51.359	Heterocephalus_glaber_female
ENSDARG00000059887	eral1	81	51.359	ENSHGLG00100018820	ERAL1	80	51.359	Heterocephalus_glaber_male
ENSDARG00000059887	eral1	89	57.921	ENSHCOG00000009314	eral1	94	57.921	Hippocampus_comes
ENSDARG00000059887	eral1	99	58.747	ENSIPUG00000013409	eral1	99	58.747	Ictalurus_punctatus
ENSDARG00000059887	eral1	87	50.388	ENSSTOG00000003459	ERAL1	85	50.388	Ictidomys_tridecemlineatus
ENSDARG00000059887	eral1	64	49.655	ENSJJAG00000014664	-	95	49.655	Jaculus_jaculus
ENSDARG00000059887	eral1	100	57.048	ENSKMAG00000012520	eral1	100	57.048	Kryptolebias_marmoratus
ENSDARG00000059887	eral1	100	58.242	ENSLBEG00000016447	eral1	100	58.772	Labrus_bergylta
ENSDARG00000059887	eral1	88	54.458	ENSLACG00000012328	ERAL1	99	54.458	Latimeria_chalumnae
ENSDARG00000059887	eral1	100	52.688	ENSLOCG00000003302	eral1	100	52.688	Lepisosteus_oculatus
ENSDARG00000059887	eral1	84	52.128	ENSLAFG00000005438	ERAL1	83	52.128	Loxodonta_africana
ENSDARG00000059887	eral1	87	51.928	ENSMFAG00000000501	ERAL1	85	51.928	Macaca_fascicularis
ENSDARG00000059887	eral1	87	51.671	ENSMMUG00000002776	ERAL1	72	51.804	Macaca_mulatta
ENSDARG00000059887	eral1	87	51.671	ENSMNEG00000039112	ERAL1	85	51.671	Macaca_nemestrina
ENSDARG00000059887	eral1	87	51.671	ENSMLEG00000040246	ERAL1	85	51.671	Mandrillus_leucophaeus
ENSDARG00000059887	eral1	100	57.642	ENSMAMG00000006623	eral1	100	57.642	Mastacembelus_armatus
ENSDARG00000059887	eral1	100	60.398	ENSMZEG00005000255	eral1	100	60.398	Maylandia_zebra
ENSDARG00000059887	eral1	79	49.485	ENSMGAG00000012769	ERAL1	99	49.485	Meleagris_gallopavo
ENSDARG00000059887	eral1	59	51.698	ENSMAUG00000001516	Eral1	78	51.698	Mesocricetus_auratus
ENSDARG00000059887	eral1	87	50.000	ENSMICG00000005345	ERAL1	85	50.000	Microcebus_murinus
ENSDARG00000059887	eral1	87	51.163	ENSMOCG00000022786	Eral1	84	51.571	Microtus_ochrogaster
ENSDARG00000059887	eral1	89	56.404	ENSMMOG00000005143	eral1	99	56.404	Mola_mola
ENSDARG00000059887	eral1	81	51.944	ENSMODG00000019305	ERAL1	83	51.944	Monodelphis_domestica
ENSDARG00000059887	eral1	89	56.618	ENSMALG00000013394	eral1	99	58.524	Monopterus_albus
ENSDARG00000059887	eral1	85	50.260	MGP_CAROLIEiJ_G0016788	Eral1	84	50.524	Mus_caroli
ENSDARG00000059887	eral1	85	50.785	ENSMUSG00000020832	Eral1	84	50.785	Mus_musculus
ENSDARG00000059887	eral1	87	46.272	MGP_PahariEiJ_G0017925	Eral1	83	46.615	Mus_pahari
ENSDARG00000059887	eral1	85	50.521	MGP_SPRETEiJ_G0017631	Eral1	84	50.785	Mus_spretus
ENSDARG00000059887	eral1	86	51.938	ENSMPUG00000014146	ERAL1	85	51.938	Mustela_putorius_furo
ENSDARG00000059887	eral1	85	52.083	ENSMLUG00000013467	ERAL1	84	52.083	Myotis_lucifugus
ENSDARG00000059887	eral1	88	51.899	ENSNGAG00000019318	Eral1	87	51.899	Nannospalax_galili
ENSDARG00000059887	eral1	100	60.177	ENSNBRG00000015799	eral1	100	60.177	Neolamprologus_brichardi
ENSDARG00000059887	eral1	87	51.928	ENSNLEG00000002994	ERAL1	85	51.928	Nomascus_leucogenys
ENSDARG00000059887	eral1	90	50.245	ENSMEUG00000015582	ERAL1	97	50.245	Notamacropus_eugenii
ENSDARG00000059887	eral1	87	53.985	ENSOPRG00000014488	ERAL1	85	53.985	Ochotona_princeps
ENSDARG00000059887	eral1	77	48.397	ENSODEG00000011337	ERAL1	99	52.239	Octodon_degus
ENSDARG00000059887	eral1	89	64.000	ENSONIG00000012792	eral1	97	64.000	Oreochromis_niloticus
ENSDARG00000059887	eral1	84	52.660	ENSOCUG00000005572	ERAL1	82	52.660	Oryctolagus_cuniculus
ENSDARG00000059887	eral1	100	56.416	ENSORLG00000011440	eral1	100	56.416	Oryzias_latipes
ENSDARG00000059887	eral1	100	56.195	ENSORLG00020018272	eral1	100	56.195	Oryzias_latipes_hni
ENSDARG00000059887	eral1	100	56.195	ENSORLG00015001511	eral1	100	56.195	Oryzias_latipes_hsok
ENSDARG00000059887	eral1	100	57.942	ENSOMEG00000007662	eral1	100	57.942	Oryzias_melastigma
ENSDARG00000059887	eral1	87	51.157	ENSOGAG00000011082	ERAL1	85	51.157	Otolemur_garnettii
ENSDARG00000059887	eral1	84	53.457	ENSOARG00000004456	ERAL1	76	53.457	Ovis_aries
ENSDARG00000059887	eral1	55	50.201	ENSPPAG00000033864	-	91	50.201	Pan_paniscus
ENSDARG00000059887	eral1	87	52.713	ENSPPRG00000006097	ERAL1	85	52.713	Panthera_pardus
ENSDARG00000059887	eral1	87	52.196	ENSPTIG00000013961	ERAL1	85	52.196	Panthera_tigris_altaica
ENSDARG00000059887	eral1	87	51.928	ENSPTRG00000008938	ERAL1	85	51.928	Pan_troglodytes
ENSDARG00000059887	eral1	87	51.928	ENSPANG00000023400	ERAL1	85	51.928	Papio_anubis
ENSDARG00000059887	eral1	100	51.957	ENSPKIG00000016278	eral1	99	51.957	Paramormyrops_kingsleyae
ENSDARG00000059887	eral1	88	48.843	ENSPSIG00000007018	ERAL1	99	48.843	Pelodiscus_sinensis
ENSDARG00000059887	eral1	88	60.750	ENSPMGG00000007387	eral1	92	60.750	Periophthalmus_magnuspinnatus
ENSDARG00000059887	eral1	87	51.680	ENSPEMG00000000668	Eral1	85	51.680	Peromyscus_maniculatus_bairdii
ENSDARG00000059887	eral1	77	46.839	ENSPMAG00000008076	eral1	98	46.839	Petromyzon_marinus
ENSDARG00000059887	eral1	89	60.546	ENSPFOG00000018592	eral1	99	60.546	Poecilia_formosa
ENSDARG00000059887	eral1	100	57.048	ENSPLAG00000022753	eral1	100	57.048	Poecilia_latipinna
ENSDARG00000059887	eral1	100	56.828	ENSPMEG00000018207	eral1	100	56.828	Poecilia_mexicana
ENSDARG00000059887	eral1	94	58.824	ENSPREG00000006895	eral1	97	58.824	Poecilia_reticulata
ENSDARG00000059887	eral1	87	52.185	ENSPPYG00000008113	ERAL1	85	52.185	Pongo_abelii
ENSDARG00000059887	eral1	84	52.381	ENSPCAG00000003013	ERAL1	83	52.381	Procavia_capensis
ENSDARG00000059887	eral1	87	51.538	ENSPCOG00000023179	ERAL1	85	51.538	Propithecus_coquereli
ENSDARG00000059887	eral1	86	51.554	ENSPVAG00000001796	ERAL1	85	51.804	Pteropus_vampyrus
ENSDARG00000059887	eral1	100	59.956	ENSPNYG00000017330	eral1	100	59.956	Pundamilia_nyererei
ENSDARG00000059887	eral1	99	60.394	ENSPNAG00000009960	eral1	99	60.394	Pygocentrus_nattereri
ENSDARG00000059887	eral1	85	51.302	ENSRNOG00000010673	Eral1	84	51.302	Rattus_norvegicus
ENSDARG00000059887	eral1	87	52.196	ENSRBIG00000006150	ERAL1	85	52.196	Rhinopithecus_bieti
ENSDARG00000059887	eral1	87	51.938	ENSRROG00000026778	ERAL1	85	51.938	Rhinopithecus_roxellana
ENSDARG00000059887	eral1	81	52.762	ENSSHAG00000014995	ERAL1	93	52.762	Sarcophilus_harrisii
ENSDARG00000059887	eral1	79	59.016	ENSSFOG00015015511	eral1	90	59.016	Scleropages_formosus
ENSDARG00000059887	eral1	89	61.787	ENSSMAG00000000305	eral1	90	61.787	Scophthalmus_maximus
ENSDARG00000059887	eral1	89	63.275	ENSSDUG00000017121	eral1	90	63.275	Seriola_dumerili
ENSDARG00000059887	eral1	89	63.366	ENSSLDG00000019349	eral1	90	63.366	Seriola_lalandi_dorsalis
ENSDARG00000059887	eral1	93	47.619	ENSSARG00000010129	ERAL1	98	47.619	Sorex_araneus
ENSDARG00000059887	eral1	82	52.589	ENSSPUG00000005676	ERAL1	100	57.627	Sphenodon_punctatus
ENSDARG00000059887	eral1	100	58.553	ENSSPAG00000018370	eral1	100	58.553	Stegastes_partitus
ENSDARG00000059887	eral1	84	52.394	ENSSSCG00000017776	ERAL1	83	52.394	Sus_scrofa
ENSDARG00000059887	eral1	79	44.675	ENSTGUG00000006210	ERAL1	99	44.703	Taeniopygia_guttata
ENSDARG00000059887	eral1	97	56.180	ENSTRUG00000000660	eral1	90	59.057	Takifugu_rubripes
ENSDARG00000059887	eral1	74	54.062	ENSTNIG00000008531	eral1	98	72.519	Tetraodon_nigroviridis
ENSDARG00000059887	eral1	86	47.150	ENSTBEG00000007215	ERAL1	85	47.150	Tupaia_belangeri
ENSDARG00000059887	eral1	84	52.910	ENSTTRG00000004107	ERAL1	83	52.910	Tursiops_truncatus
ENSDARG00000059887	eral1	84	51.852	ENSUAMG00000015904	ERAL1	83	51.852	Ursus_americanus
ENSDARG00000059887	eral1	84	52.116	ENSUMAG00000011679	ERAL1	83	52.116	Ursus_maritimus
ENSDARG00000059887	eral1	69	46.602	ENSVPAG00000006626	ERAL1	80	46.602	Vicugna_pacos
ENSDARG00000059887	eral1	86	51.414	ENSVVUG00000017651	ERAL1	85	51.414	Vulpes_vulpes
ENSDARG00000059887	eral1	83	56.452	ENSXETG00000019633	eral1	95	56.452	Xenopus_tropicalis
ENSDARG00000059887	eral1	87	62.814	ENSXCOG00000005705	eral1	91	62.531	Xiphophorus_couchianus
ENSDARG00000059887	eral1	99	58.352	ENSXMAG00000005455	eral1	99	58.150	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000028	ribosomal small subunit assembly	21873635.	IBA	Process
GO:0000028	ribosomal small subunit assembly	-	ISS	Process
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0005743	mitochondrial inner membrane	-	IEA	Component
GO:0005759	mitochondrial matrix	21873635.	IBA	Component
GO:0005759	mitochondrial matrix	-	ISS	Component
GO:0016020	membrane	-	IEA	Component
GO:0019843	rRNA binding	21873635.	IBA	Function
GO:0019843	rRNA binding	-	IEA	Function
GO:0019843	rRNA binding	-	ISS	Function
GO:0042254	ribosome biogenesis	-	IEA	Process
GO:0043024	ribosomal small subunit binding	21873635.	IBA	Function
GO:0043024	ribosomal small subunit binding	-	ISS	Function