EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDARG00000059908 (Gene tree)
Gene ID: 559409
Gene Symbol: si:ch211-217k17.7
Alias: im:7155625
Full Name: si:ch211-217k17.7
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 9313 bases
Position: chr1:52452010-52461322
Accession: ZDB-GENE-061009-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000078271	Cgr1	PF03879.14	4.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000083836	-	1212	-	ENSDARP00000078271	283 (aa)	-	A2BG55

Gene Model

Click here to download ENSDARG00000059908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000059908's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000059908	si:ch211-217k17.7	58	64.535	ENSAPOG00000010968	si:ch211-217k17.7	91	50.714	Acanthochromis_polyacanthus
ENSDARG00000059908	si:ch211-217k17.7	90	47.940	ENSACIG00000020679	si:ch211-217k17.7	78	47.940	Amphilophus_citrinellus
ENSDARG00000059908	si:ch211-217k17.7	85	51.119	ENSAOCG00000006303	si:ch211-217k17.7	91	49.638	Amphiprion_ocellaris
ENSDARG00000059908	si:ch211-217k17.7	85	50.746	ENSAPEG00000015364	si:ch211-217k17.7	84	52.174	Amphiprion_percula
ENSDARG00000059908	si:ch211-217k17.7	86	51.550	ENSATEG00000016386	si:ch211-217k17.7	84	53.101	Anabas_testudineus
ENSDARG00000059908	si:ch211-217k17.7	60	66.082	ENSAMXG00000037666	si:ch211-217k17.7	75	66.082	Astyanax_mexicanus
ENSDARG00000059908	si:ch211-217k17.7	91	49.042	ENSCSEG00000002637	si:ch211-217k17.7	93	50.177	Cynoglossus_semilaevis
ENSDARG00000059908	si:ch211-217k17.7	87	50.186	ENSCVAG00000003135	si:ch211-217k17.7	88	51.145	Cyprinodon_variegatus
ENSDARG00000059908	si:ch211-217k17.7	90	53.763	ENSELUG00000022687	si:ch211-217k17.7	92	53.265	Esox_lucius
ENSDARG00000059908	si:ch211-217k17.7	89	45.977	ENSGMOG00000016242	-	88	46.743	Gadus_morhua
ENSDARG00000059908	si:ch211-217k17.7	85	48.649	ENSGAFG00000005681	si:ch211-217k17.7	85	52.191	Gambusia_affinis
ENSDARG00000059908	si:ch211-217k17.7	84	50.417	ENSGACG00000017630	si:ch211-217k17.7	99	49.802	Gasterosteus_aculeatus
ENSDARG00000059908	si:ch211-217k17.7	85	53.755	ENSHBUG00000010352	si:ch211-217k17.7	83	53.755	Haplochromis_burtoni
ENSDARG00000059908	si:ch211-217k17.7	52	54.110	ENSHGLG00100010685	CCDC86	59	54.110	Heterocephalus_glaber_male
ENSDARG00000059908	si:ch211-217k17.7	86	54.118	ENSLBEG00000020547	-	81	53.333	Labrus_bergylta
ENSDARG00000059908	si:ch211-217k17.7	94	49.310	ENSMAMG00000016395	si:ch211-217k17.7	93	48.814	Mastacembelus_armatus
ENSDARG00000059908	si:ch211-217k17.7	85	53.360	ENSMZEG00005019822	si:ch211-217k17.7	83	53.360	Maylandia_zebra
ENSDARG00000059908	si:ch211-217k17.7	89	52.652	ENSMMOG00000006446	si:ch211-217k17.7	86	50.746	Mola_mola
ENSDARG00000059908	si:ch211-217k17.7	57	64.417	ENSNBRG00000013330	-	86	75.728	Neolamprologus_brichardi
ENSDARG00000059908	si:ch211-217k17.7	93	49.281	ENSONIG00000017568	si:ch211-217k17.7	91	48.227	Oreochromis_niloticus
ENSDARG00000059908	si:ch211-217k17.7	83	55.510	ENSORLG00000006331	-	85	54.472	Oryzias_latipes
ENSDARG00000059908	si:ch211-217k17.7	83	55.144	ENSORLG00020021345	si:ch211-217k17.7	85	55.967	Oryzias_latipes_hni
ENSDARG00000059908	si:ch211-217k17.7	83	55.691	ENSORLG00015021538	si:ch211-217k17.7	85	54.065	Oryzias_latipes_hsok
ENSDARG00000059908	si:ch211-217k17.7	76	48.444	ENSOMEG00000007064	si:ch211-217k17.7	82	48.908	Oryzias_melastigma
ENSDARG00000059908	si:ch211-217k17.7	92	45.936	ENSPKIG00000016503	si:ch211-217k17.7	87	48.519	Paramormyrops_kingsleyae
ENSDARG00000059908	si:ch211-217k17.7	68	56.477	ENSPFOG00000011617	si:ch211-217k17.7	86	50.570	Poecilia_formosa
ENSDARG00000059908	si:ch211-217k17.7	68	56.477	ENSPLAG00000016122	si:ch211-217k17.7	87	50.570	Poecilia_latipinna
ENSDARG00000059908	si:ch211-217k17.7	85	50.566	ENSPMEG00000018535	si:ch211-217k17.7	85	51.550	Poecilia_mexicana
ENSDARG00000059908	si:ch211-217k17.7	88	47.273	ENSPREG00000005478	si:ch211-217k17.7	88	49.434	Poecilia_reticulata
ENSDARG00000059908	si:ch211-217k17.7	60	65.497	ENSPNAG00000010886	si:ch211-217k17.7	71	65.497	Pygocentrus_nattereri
ENSDARG00000059908	si:ch211-217k17.7	82	50.216	ENSSDUG00000002689	si:ch211-217k17.7	84	52.282	Seriola_dumerili
ENSDARG00000059908	si:ch211-217k17.7	87	51.417	ENSSLDG00000016681	si:ch211-217k17.7	82	54.331	Seriola_lalandi_dorsalis
ENSDARG00000059908	si:ch211-217k17.7	85	48.249	ENSXCOG00000011207	si:ch211-217k17.7	85	49.231	Xiphophorus_couchianus
ENSDARG00000059908	si:ch211-217k17.7	85	49.416	ENSXMAG00000005529	si:ch211-217k17.7	85	50.769	Xiphophorus_maculatus