EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000060103 (Gene tree)
Gene ID: 100005268
Gene Symbol: cpeb3
Alias: si:ch211-129m12.2
Full Name: cytoplasmic polyadenylation element binding protein 3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 65178 bases
Position: chr13:42406883-42472060
Accession: ZDB-GENE-090312-68
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000078789	RRM_1	PF00076.22	7.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000084354	-	1882	XM_005169516	ENSDARP00000078789	586 (aa)	XP_005169573	F1RE03

Gene Model

Click here to download ENSDARG00000060103's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre04114	Oocyte meiosis	KEGG
dre04914	Progesterone-mediated oocyte maturation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000060103's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000060103	cpeb3	72	78.271	ENSDARG00000100499	cpeb4b	82	64.250
ENSDARG00000060103	cpeb3	100	55.869	ENSDARG00000056691	cpeb4a	100	54.844
ENSDARG00000060103	cpeb3	70	75.895	ENSDARG00000052604	cpeb2	100	75.418

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000060103	cpeb3	100	66.619	ENSG00000107864	CPEB3	100	66.906	Homo_sapiens
ENSDARG00000060103	cpeb3	100	70.278	ENSAPOG00000003625	cpeb3	100	71.596	Acanthochromis_polyacanthus
ENSDARG00000060103	cpeb3	100	69.173	ENSAMEG00000014204	CPEB3	100	69.624	Ailuropoda_melanoleuca
ENSDARG00000060103	cpeb3	100	70.821	ENSACIG00000001933	cpeb3	100	71.848	Amphilophus_citrinellus
ENSDARG00000060103	cpeb3	100	71.472	ENSAOCG00000015423	cpeb3	100	72.838	Amphiprion_ocellaris
ENSDARG00000060103	cpeb3	100	73.333	ENSATEG00000010649	cpeb3	100	74.394	Anabas_testudineus
ENSDARG00000060103	cpeb3	51	91.148	ENSAPLG00000014437	CPEB4	98	91.362	Anas_platyrhynchos
ENSDARG00000060103	cpeb3	100	70.000	ENSACAG00000006335	CPEB3	100	70.441	Anolis_carolinensis
ENSDARG00000060103	cpeb3	100	66.525	ENSANAG00000037406	CPEB3	100	64.632	Aotus_nancymaae
ENSDARG00000060103	cpeb3	100	72.382	ENSACLG00000018590	cpeb3	89	72.838	Astatotilapia_calliptera
ENSDARG00000060103	cpeb3	100	68.156	ENSBTAG00000015450	CPEB3	92	95.946	Bos_taurus
ENSDARG00000060103	cpeb3	92	68.413	ENSCJAG00000008495	CPEB3	100	64.485	Callithrix_jacchus
ENSDARG00000060103	cpeb3	100	66.763	ENSCAFG00000007423	CPEB3	100	67.050	Canis_familiaris
ENSDARG00000060103	cpeb3	100	64.812	ENSCAFG00020001981	CPEB3	89	95.946	Canis_lupus_dingo
ENSDARG00000060103	cpeb3	100	65.738	ENSCHIG00000017337	CPEB3	100	66.156	Capra_hircus
ENSDARG00000060103	cpeb3	90	78.899	ENSTSYG00000003928	CPEB3	83	78.507	Carlito_syrichta
ENSDARG00000060103	cpeb3	100	66.620	ENSCCAG00000033267	CPEB3	100	63.649	Cebus_capucinus
ENSDARG00000060103	cpeb3	100	66.286	ENSCATG00000038447	CPEB3	100	65.429	Cercocebus_atys
ENSDARG00000060103	cpeb3	75	78.316	ENSCLAG00000011817	CPEB3	95	78.316	Chinchilla_lanigera
ENSDARG00000060103	cpeb3	100	66.381	ENSCSAG00000006579	CPEB3	100	65.522	Chlorocebus_sabaeus
ENSDARG00000060103	cpeb3	61	72.105	ENSCHOG00000000272	-	100	72.105	Choloepus_hoffmanni
ENSDARG00000060103	cpeb3	100	73.323	ENSCPBG00000023779	CPEB3	100	72.561	Chrysemys_picta_bellii
ENSDARG00000060103	cpeb3	100	66.476	ENSCANG00000040306	CPEB3	100	66.762	Colobus_angolensis_palliatus
ENSDARG00000060103	cpeb3	100	65.042	ENSCGRG00001003846	Cpeb3	100	65.460	Cricetulus_griseus_chok1gshd
ENSDARG00000060103	cpeb3	68	80.516	ENSCGRG00000002839	Cpeb3	100	80.282	Cricetulus_griseus_crigri
ENSDARG00000060103	cpeb3	91	72.052	ENSCSEG00000008423	cpeb3	100	71.729	Cynoglossus_semilaevis
ENSDARG00000060103	cpeb3	100	73.071	ENSCVAG00000005998	cpeb3	100	74.173	Cyprinodon_variegatus
ENSDARG00000060103	cpeb3	100	59.889	ENSDNOG00000048639	CPEB3	100	60.306	Dasypus_novemcinctus
ENSDARG00000060103	cpeb3	95	81.938	ENSDORG00000028940	Cpeb3	86	81.938	Dipodomys_ordii
ENSDARG00000060103	cpeb3	100	61.980	ENSETEG00000000111	CPEB3	100	62.554	Echinops_telfairi
ENSDARG00000060103	cpeb3	92	62.602	ENSEBUG00000010745	cpeb3	79	62.602	Eptatretus_burgeri
ENSDARG00000060103	cpeb3	100	65.369	ENSEASG00005011095	CPEB3	100	65.786	Equus_asinus_asinus
ENSDARG00000060103	cpeb3	100	65.460	ENSECAG00000000077	CPEB3	100	65.877	Equus_caballus
ENSDARG00000060103	cpeb3	100	76.535	ENSELUG00000019251	cpeb3	100	76.693	Esox_lucius
ENSDARG00000060103	cpeb3	100	66.859	ENSFCAG00000032380	CPEB3	100	67.147	Felis_catus
ENSDARG00000060103	cpeb3	100	73.030	ENSFALG00000007952	CPEB3	87	73.333	Ficedula_albicollis
ENSDARG00000060103	cpeb3	90	82.798	ENSFDAG00000016459	CPEB3	85	82.353	Fukomys_damarensis
ENSDARG00000060103	cpeb3	100	71.560	ENSFHEG00000021371	cpeb3	100	70.162	Fundulus_heteroclitus
ENSDARG00000060103	cpeb3	87	69.205	ENSGMOG00000008307	cpeb3	99	69.712	Gadus_morhua
ENSDARG00000060103	cpeb3	100	70.425	ENSGALG00000006912	CPEB3	100	70.717	Gallus_gallus
ENSDARG00000060103	cpeb3	99	70.074	ENSGACG00000002944	cpeb3	99	70.667	Gasterosteus_aculeatus
ENSDARG00000060103	cpeb3	100	73.466	ENSGAGG00000008528	CPEB3	100	72.699	Gopherus_agassizii
ENSDARG00000060103	cpeb3	100	65.369	ENSGGOG00000016441	CPEB3	100	65.786	Gorilla_gorilla
ENSDARG00000060103	cpeb3	100	71.366	ENSHBUG00000004097	cpeb3	93	71.806	Haplochromis_burtoni
ENSDARG00000060103	cpeb3	100	66.905	ENSHGLG00000014022	CPEB3	100	67.622	Heterocephalus_glaber_female
ENSDARG00000060103	cpeb3	100	65.224	ENSHGLG00100005200	CPEB3	100	66.811	Heterocephalus_glaber_male
ENSDARG00000060103	cpeb3	100	71.710	ENSHCOG00000005747	cpeb3	100	72.163	Hippocampus_comes
ENSDARG00000060103	cpeb3	100	72.496	ENSIPUG00000018571	cpeb3	100	75.113	Ictalurus_punctatus
ENSDARG00000060103	cpeb3	100	66.097	ENSSTOG00000028061	CPEB3	100	66.524	Ictidomys_tridecemlineatus
ENSDARG00000060103	cpeb3	68	80.751	ENSJJAG00000009135	Cpeb3	100	80.516	Jaculus_jaculus
ENSDARG00000060103	cpeb3	100	70.044	ENSLBEG00000025961	cpeb3	100	71.659	Labrus_bergylta
ENSDARG00000060103	cpeb3	100	76.415	ENSLACG00000011307	CPEB3	92	75.591	Latimeria_chalumnae
ENSDARG00000060103	cpeb3	100	76.000	ENSLOCG00000007131	cpeb3	100	76.154	Lepisosteus_oculatus
ENSDARG00000060103	cpeb3	100	70.242	ENSLAFG00000018716	CPEB3	94	83.921	Loxodonta_africana
ENSDARG00000060103	cpeb3	95	76.101	ENSMFAG00000025613	CPEB3	100	63.897	Macaca_fascicularis
ENSDARG00000060103	cpeb3	100	66.476	ENSMMUG00000015050	CPEB3	100	66.046	Macaca_mulatta
ENSDARG00000060103	cpeb3	100	66.191	ENSMNEG00000045465	CPEB3	100	65.335	Macaca_nemestrina
ENSDARG00000060103	cpeb3	100	65.496	ENSMLEG00000031794	CPEB3	100	64.733	Mandrillus_leucophaeus
ENSDARG00000060103	cpeb3	100	70.349	ENSMAMG00000012794	cpeb3	100	69.913	Mastacembelus_armatus
ENSDARG00000060103	cpeb3	100	71.114	ENSMZEG00005012068	cpeb3	100	71.554	Maylandia_zebra
ENSDARG00000060103	cpeb3	100	73.141	ENSMGAG00000009148	CPEB3	99	73.445	Meleagris_gallopavo
ENSDARG00000060103	cpeb3	100	65.857	ENSMAUG00000002789	Cpeb3	100	66.143	Mesocricetus_auratus
ENSDARG00000060103	cpeb3	100	65.315	ENSMICG00000026866	CPEB3	100	65.874	Microcebus_murinus
ENSDARG00000060103	cpeb3	100	64.910	ENSMOCG00000016486	Cpeb3	100	65.326	Microtus_ochrogaster
ENSDARG00000060103	cpeb3	96	70.597	ENSMMOG00000008209	cpeb3	88	72.484	Mola_mola
ENSDARG00000060103	cpeb3	100	81.136	ENSMODG00000006673	CPEB3	91	81.212	Monodelphis_domestica
ENSDARG00000060103	cpeb3	100	77.456	ENSMALG00000009305	cpeb3	90	96.053	Monopterus_albus
ENSDARG00000060103	cpeb3	100	67.000	MGP_CAROLIEiJ_G0022910	Cpeb3	100	80.516	Mus_caroli
ENSDARG00000060103	cpeb3	100	67.385	ENSMUSG00000039652	Cpeb3	100	80.516	Mus_musculus
ENSDARG00000060103	cpeb3	100	66.953	MGP_PahariEiJ_G0014405	Cpeb3	100	80.516	Mus_pahari
ENSDARG00000060103	cpeb3	100	67.096	MGP_SPRETEiJ_G0023829	Cpeb3	100	80.516	Mus_spretus
ENSDARG00000060103	cpeb3	100	67.914	ENSMPUG00000017227	CPEB3	100	68.345	Mustela_putorius_furo
ENSDARG00000060103	cpeb3	100	65.734	ENSNGAG00000015621	Cpeb3	100	66.154	Nannospalax_galili
ENSDARG00000060103	cpeb3	100	72.907	ENSNBRG00000018343	cpeb3	91	73.212	Neolamprologus_brichardi
ENSDARG00000060103	cpeb3	100	66.428	ENSNLEG00000012600	CPEB3	100	66.714	Nomascus_leucogenys
ENSDARG00000060103	cpeb3	80	81.818	ENSMEUG00000009948	-	74	81.818	Notamacropus_eugenii
ENSDARG00000060103	cpeb3	100	63.562	ENSODEG00000004591	CPEB3	100	63.562	Octodon_degus
ENSDARG00000060103	cpeb3	56	93.578	ENSOANG00000015723	-	99	93.578	Ornithorhynchus_anatinus
ENSDARG00000060103	cpeb3	100	65.363	ENSOCUG00000010454	CPEB3	100	65.922	Oryctolagus_cuniculus
ENSDARG00000060103	cpeb3	100	73.776	ENSORLG00000000726	cpeb3	100	72.670	Oryzias_latipes
ENSDARG00000060103	cpeb3	100	74.568	ENSORLG00020004475	cpeb3	100	74.097	Oryzias_latipes_hni
ENSDARG00000060103	cpeb3	100	74.568	ENSORLG00015011683	cpeb3	100	74.097	Oryzias_latipes_hsok
ENSDARG00000060103	cpeb3	100	75.353	ENSOMEG00000018265	cpeb3	93	74.097	Oryzias_melastigma
ENSDARG00000060103	cpeb3	100	66.141	ENSOGAG00000002002	CPEB3	100	66.571	Otolemur_garnettii
ENSDARG00000060103	cpeb3	100	67.003	ENSOARG00000016671	CPEB3	100	67.291	Ovis_aries
ENSDARG00000060103	cpeb3	100	63.215	ENSPPAG00000031528	CPEB3	100	63.086	Pan_paniscus
ENSDARG00000060103	cpeb3	100	66.859	ENSPPRG00000015654	CPEB3	100	67.147	Panthera_pardus
ENSDARG00000060103	cpeb3	72	77.582	ENSPTIG00000012018	CPEB3	97	96.194	Panthera_tigris_altaica
ENSDARG00000060103	cpeb3	100	65.369	ENSPTRG00000002753	CPEB3	100	65.786	Pan_troglodytes
ENSDARG00000060103	cpeb3	100	63.497	ENSPANG00000021561	CPEB3	100	63.217	Papio_anubis
ENSDARG00000060103	cpeb3	100	77.174	ENSPKIG00000015878	cpeb3	100	77.795	Paramormyrops_kingsleyae
ENSDARG00000060103	cpeb3	100	69.132	ENSPMGG00000022722	cpeb3	100	70.209	Periophthalmus_magnuspinnatus
ENSDARG00000060103	cpeb3	100	67.192	ENSPEMG00000008448	Cpeb3	100	67.622	Peromyscus_maniculatus_bairdii
ENSDARG00000060103	cpeb3	100	77.132	ENSPCIG00000017302	CPEB3	92	77.220	Phascolarctos_cinereus
ENSDARG00000060103	cpeb3	100	77.778	ENSPFOG00000011231	cpeb3	100	78.422	Poecilia_formosa
ENSDARG00000060103	cpeb3	100	70.877	ENSPLAG00000002852	cpeb3	100	71.174	Poecilia_latipinna
ENSDARG00000060103	cpeb3	100	72.048	ENSPMEG00000021572	cpeb3	100	72.727	Poecilia_mexicana
ENSDARG00000060103	cpeb3	100	72.173	ENSPREG00000003085	cpeb3	100	72.470	Poecilia_reticulata
ENSDARG00000060103	cpeb3	100	63.689	ENSPPYG00000002481	CPEB3	100	63.977	Pongo_abelii
ENSDARG00000060103	cpeb3	100	59.530	ENSPCAG00000012417	CPEB3	100	59.945	Procavia_capensis
ENSDARG00000060103	cpeb3	100	66.189	ENSPCOG00000023690	CPEB3	100	66.619	Propithecus_coquereli
ENSDARG00000060103	cpeb3	80	80.789	ENSPVAG00000007664	CPEB3	74	80.789	Pteropus_vampyrus
ENSDARG00000060103	cpeb3	100	71.366	ENSPNYG00000005300	cpeb3	100	71.806	Pundamilia_nyererei
ENSDARG00000060103	cpeb3	100	73.451	ENSPNAG00000012111	cpeb3	100	74.779	Pygocentrus_nattereri
ENSDARG00000060103	cpeb3	100	65.638	ENSRNOG00000020689	Cpeb3	82	71.635	Rattus_norvegicus
ENSDARG00000060103	cpeb3	100	65.508	ENSRBIG00000041079	CPEB3	100	64.812	Rhinopithecus_bieti
ENSDARG00000060103	cpeb3	100	66.667	ENSRROG00000031558	CPEB3	100	65.805	Rhinopithecus_roxellana
ENSDARG00000060103	cpeb3	72	82.028	ENSSBOG00000035843	CPEB3	100	82.028	Saimiri_boliviensis_boliviensis
ENSDARG00000060103	cpeb3	70	75.238	ENSSFOG00015018275	-	100	74.882	Scleropages_formosus
ENSDARG00000060103	cpeb3	100	73.893	ENSSFOG00015004974	cpeb3	100	73.435	Scleropages_formosus
ENSDARG00000060103	cpeb3	100	72.948	ENSSMAG00000013924	cpeb3	100	74.316	Scophthalmus_maximus
ENSDARG00000060103	cpeb3	100	70.982	ENSSDUG00000019766	cpeb3	100	71.726	Seriola_dumerili
ENSDARG00000060103	cpeb3	100	72.603	ENSSLDG00000021438	cpeb3	100	73.364	Seriola_lalandi_dorsalis
ENSDARG00000060103	cpeb3	61	81.316	ENSSARG00000001994	CPEB3	100	81.316	Sorex_araneus
ENSDARG00000060103	cpeb3	53	92.308	ENSSPUG00000003601	CPEB3	94	95.434	Sphenodon_punctatus
ENSDARG00000060103	cpeb3	100	69.540	ENSSPAG00000004725	cpeb3	100	70.546	Stegastes_partitus
ENSDARG00000060103	cpeb3	100	66.239	ENSSSCG00000010468	CPEB3	100	66.524	Sus_scrofa
ENSDARG00000060103	cpeb3	100	70.425	ENSTGUG00000008988	CPEB3	100	70.717	Taeniopygia_guttata
ENSDARG00000060103	cpeb3	70	72.018	ENSTBEG00000013125	-	60	72.018	Tupaia_belangeri
ENSDARG00000060103	cpeb3	100	60.724	ENSTTRG00000012334	CPEB3	100	61.142	Tursiops_truncatus
ENSDARG00000060103	cpeb3	100	64.615	ENSUAMG00000010827	CPEB3	87	91.525	Ursus_americanus
ENSDARG00000060103	cpeb3	53	91.290	ENSUMAG00000001870	-	96	96.479	Ursus_maritimus
ENSDARG00000060103	cpeb3	100	67.914	ENSVVUG00000021375	CPEB3	100	68.345	Vulpes_vulpes
ENSDARG00000060103	cpeb3	100	72.397	ENSXETG00000012190	cpeb3	98	73.817	Xenopus_tropicalis
ENSDARG00000060103	cpeb3	100	72.741	ENSXCOG00000006122	cpeb3	100	74.068	Xiphophorus_couchianus
ENSDARG00000060103	cpeb3	100	76.461	ENSXMAG00000007652	cpeb3	94	96.233	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000900	translation repressor activity, mRNA regulatory element binding	21873635.	IBA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003730	mRNA 3'-UTR binding	21873635.	IBA	Function
GO:0003730	mRNA 3'-UTR binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006417	regulation of translation	-	IEA	Process
GO:0008135	translation factor activity, RNA binding	21873635.	IBA	Function
GO:0043005	neuron projection	21873635.	IBA	Component
GO:0043022	ribosome binding	21873635.	IBA	Function
GO:0045182	translation regulator activity	-	IEA	Function
GO:0045202	synapse	21873635.	IBA	Component
GO:1990124	messenger ribonucleoprotein complex	21873635.	IBA	Component
GO:2000766	negative regulation of cytoplasmic translation	21873635.	IBA	Process