EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000060411 (Gene tree)
Gene ID: 768189
Gene Symbol: ddx28
Alias: zgc:153386
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 1907 bases
Position: chr7:34963748-34965654
Accession: ZDB-GENE-061013-64
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000079522	ResIII	PF04851.15	3.9e-05	1	1
ENSDARP00000079522	DEAD	PF00270.29	7.5e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000085087	-	1907	-	ENSDARP00000079522	558 (aa)	-	F1R080

Gene Model

Click here to download ENSDARG00000060411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000060411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000060411	ddx28	60	32.239	ENSDARG00000061338	ddx6	70	30.495
ENSDARG00000060411	ddx28	66	33.086	ENSDARG00000035507	ddx31	53	32.918
ENSDARG00000060411	ddx28	61	39.655	ENSDARG00000032117	ddx1	52	39.655
ENSDARG00000060411	ddx28	69	31.579	ENSDARG00000022614	ddx43	51	31.579
ENSDARG00000060411	ddx28	67	30.343	ENSDARG00000010873	DDX17	54	30.343
ENSDARG00000060411	ddx28	50	30.667	ENSDARG00000005774	ddx3xb	96	30.667
ENSDARG00000060411	ddx28	61	30.000	ENSDARG00000030789	ddx18	50	30.000
ENSDARG00000060411	ddx28	68	31.443	ENSDARG00000100505	ddx52	60	31.088

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000060411	ddx28	92	48.952	ENSG00000182810	DDX28	95	48.952	Homo_sapiens
ENSDARG00000060411	ddx28	99	60.771	ENSAPOG00000000991	ddx28	98	60.771	Acanthochromis_polyacanthus
ENSDARG00000060411	ddx28	89	49.216	ENSAMEG00000019426	DDX28	93	49.216	Ailuropoda_melanoleuca
ENSDARG00000060411	ddx28	98	62.679	ENSACIG00000021615	ddx28	98	62.679	Amphilophus_citrinellus
ENSDARG00000060411	ddx28	99	62.522	ENSAOCG00000004610	ddx28	98	62.522	Amphiprion_ocellaris
ENSDARG00000060411	ddx28	99	62.347	ENSAPEG00000002143	ddx28	98	62.347	Amphiprion_percula
ENSDARG00000060411	ddx28	98	62.167	ENSATEG00000018691	ddx28	98	62.167	Anabas_testudineus
ENSDARG00000060411	ddx28	93	44.972	ENSACAG00000009755	DDX28	96	44.972	Anolis_carolinensis
ENSDARG00000060411	ddx28	98	59.821	ENSACLG00000012984	ddx28	98	59.821	Astatotilapia_calliptera
ENSDARG00000060411	ddx28	99	65.499	ENSAMXG00000005878	ddx28	99	65.499	Astyanax_mexicanus
ENSDARG00000060411	ddx28	92	48.571	ENSBTAG00000004290	DDX28	94	48.571	Bos_taurus
ENSDARG00000060411	ddx28	88	48.611	ENSCAFG00000020327	DDX28	93	48.611	Canis_familiaris
ENSDARG00000060411	ddx28	88	48.611	ENSCAFG00020019785	DDX28	93	48.611	Canis_lupus_dingo
ENSDARG00000060411	ddx28	90	49.805	ENSCHIG00000009658	DDX28	92	49.805	Capra_hircus
ENSDARG00000060411	ddx28	92	47.901	ENSCPOG00000013746	DDX28	96	47.901	Cavia_porcellus
ENSDARG00000060411	ddx28	92	48.571	ENSCSAG00000018472	DDX28	94	49.143	Chlorocebus_sabaeus
ENSDARG00000060411	ddx28	83	50.426	ENSCPBG00000012105	DDX28	86	51.034	Chrysemys_picta_bellii
ENSDARG00000060411	ddx28	64	39.669	ENSCSAVG00000006341	-	94	39.394	Ciona_savignyi
ENSDARG00000060411	ddx28	87	49.299	ENSCGRG00001024412	Ddx28	93	49.499	Cricetulus_griseus_chok1gshd
ENSDARG00000060411	ddx28	98	59.253	ENSCSEG00000011651	ddx28	99	59.253	Cynoglossus_semilaevis
ENSDARG00000060411	ddx28	98	60.971	ENSCVAG00000004044	ddx28	99	60.971	Cyprinodon_variegatus
ENSDARG00000060411	ddx28	63	54.270	ENSDNOG00000033593	DDX28	98	54.270	Dasypus_novemcinctus
ENSDARG00000060411	ddx28	85	49.385	ENSDORG00000028868	Ddx28	94	48.450	Dipodomys_ordii
ENSDARG00000060411	ddx28	84	33.684	FBgn0086130	Dbp21E2	82	33.917	Drosophila_melanogaster
ENSDARG00000060411	ddx28	90	49.708	ENSETEG00000001062	-	93	49.708	Echinops_telfairi
ENSDARG00000060411	ddx28	74	45.213	ENSEBUG00000004791	ddx28	79	44.762	Eptatretus_burgeri
ENSDARG00000060411	ddx28	90	49.315	ENSEASG00005020387	DDX28	93	49.315	Equus_asinus_asinus
ENSDARG00000060411	ddx28	90	49.805	ENSECAG00000006451	DDX28	93	49.805	Equus_caballus
ENSDARG00000060411	ddx28	74	44.262	ENSEEUG00000005017	DDX28	96	44.681	Erinaceus_europaeus
ENSDARG00000060411	ddx28	95	64.804	ENSELUG00000005302	ddx28	97	65.957	Esox_lucius
ENSDARG00000060411	ddx28	90	49.119	ENSFCAG00000012858	DDX28	93	49.119	Felis_catus
ENSDARG00000060411	ddx28	98	60.971	ENSFHEG00000012573	ddx28	98	60.971	Fundulus_heteroclitus
ENSDARG00000060411	ddx28	91	60.845	ENSGMOG00000017045	ddx28	97	61.036	Gadus_morhua
ENSDARG00000060411	ddx28	91	43.212	ENSGALG00000048700	DDX28	89	43.321	Gallus_gallus
ENSDARG00000060411	ddx28	98	59.858	ENSGAFG00000009249	ddx28	98	59.858	Gambusia_affinis
ENSDARG00000060411	ddx28	90	64.356	ENSGACG00000016367	ddx28	93	64.356	Gasterosteus_aculeatus
ENSDARG00000060411	ddx28	80	48.230	ENSGAGG00000004565	DDX28	98	48.230	Gopherus_agassizii
ENSDARG00000060411	ddx28	90	50.000	ENSGGOG00000001220	DDX28	93	50.000	Gorilla_gorilla
ENSDARG00000060411	ddx28	98	62.143	ENSHBUG00000001016	ddx28	98	62.143	Haplochromis_burtoni
ENSDARG00000060411	ddx28	98	60.252	ENSHCOG00000017590	ddx28	98	60.252	Hippocampus_comes
ENSDARG00000060411	ddx28	92	69.844	ENSIPUG00000017350	Ddx28	91	69.844	Ictalurus_punctatus
ENSDARG00000060411	ddx28	90	48.343	ENSSTOG00000002064	DDX28	93	48.343	Ictidomys_tridecemlineatus
ENSDARG00000060411	ddx28	90	47.860	ENSJJAG00000012460	-	93	47.860	Jaculus_jaculus
ENSDARG00000060411	ddx28	91	63.495	ENSKMAG00000018183	ddx28	90	63.495	Kryptolebias_marmoratus
ENSDARG00000060411	ddx28	90	64.833	ENSLBEG00000006072	ddx28	89	64.833	Labrus_bergylta
ENSDARG00000060411	ddx28	91	57.476	ENSLACG00000005578	DDX28	88	57.476	Latimeria_chalumnae
ENSDARG00000060411	ddx28	91	62.305	ENSLOCG00000017604	ddx28	91	62.305	Lepisosteus_oculatus
ENSDARG00000060411	ddx28	90	50.000	ENSLAFG00000031239	DDX28	94	50.000	Loxodonta_africana
ENSDARG00000060411	ddx28	92	48.762	ENSMMUG00000010836	DDX28	94	49.333	Macaca_mulatta
ENSDARG00000060411	ddx28	90	64.637	ENSMAMG00000020220	ddx28	89	64.637	Mastacembelus_armatus
ENSDARG00000060411	ddx28	98	62.500	ENSMZEG00005009292	ddx28	98	62.500	Maylandia_zebra
ENSDARG00000060411	ddx28	89	41.339	ENSMICG00000012346	-	92	40.945	Microcebus_murinus
ENSDARG00000060411	ddx28	90	49.902	ENSMOCG00000009815	Ddx28	93	49.902	Microtus_ochrogaster
ENSDARG00000060411	ddx28	99	61.250	ENSMMOG00000000270	ddx28	99	61.250	Mola_mola
ENSDARG00000060411	ddx28	90	48.330	ENSMODG00000005303	DDX28	91	48.330	Monodelphis_domestica
ENSDARG00000060411	ddx28	93	62.667	ENSMALG00000008864	ddx28	92	62.667	Monopterus_albus
ENSDARG00000060411	ddx28	90	49.119	MGP_CAROLIEiJ_G0031510	Ddx28	93	49.119	Mus_caroli
ENSDARG00000060411	ddx28	90	49.511	ENSMUSG00000045538	Ddx28	93	49.511	Mus_musculus
ENSDARG00000060411	ddx28	90	49.511	MGP_PahariEiJ_G0023110	Ddx28	93	49.511	Mus_pahari
ENSDARG00000060411	ddx28	90	49.511	MGP_SPRETEiJ_G0032628	Ddx28	93	49.511	Mus_spretus
ENSDARG00000060411	ddx28	69	49.873	ENSMPUG00000006915	DDX28	98	49.873	Mustela_putorius_furo
ENSDARG00000060411	ddx28	88	49.105	ENSMLUG00000005899	DDX28	92	49.105	Myotis_lucifugus
ENSDARG00000060411	ddx28	91	49.614	ENSNGAG00000015762	Ddx28	94	49.614	Nannospalax_galili
ENSDARG00000060411	ddx28	98	62.321	ENSNBRG00000001337	ddx28	99	62.321	Neolamprologus_brichardi
ENSDARG00000060411	ddx28	99	62.411	ENSONIG00000020597	ddx28	99	62.411	Oreochromis_niloticus
ENSDARG00000060411	ddx28	85	50.826	ENSOCUG00000023074	DDX28	93	49.805	Oryctolagus_cuniculus
ENSDARG00000060411	ddx28	90	62.648	ENSORLG00000011968	ddx28	90	62.648	Oryzias_latipes
ENSDARG00000060411	ddx28	90	63.241	ENSORLG00020001951	ddx28	91	63.241	Oryzias_latipes_hni
ENSDARG00000060411	ddx28	90	63.043	ENSORLG00015023030	ddx28	91	63.043	Oryzias_latipes_hsok
ENSDARG00000060411	ddx28	99	61.268	ENSOMEG00000012445	ddx28	100	61.268	Oryzias_melastigma
ENSDARG00000060411	ddx28	90	50.292	ENSOGAG00000016895	DDX28	93	50.292	Otolemur_garnettii
ENSDARG00000060411	ddx28	78	48.330	ENSOARG00000003313	DDX28	99	48.330	Ovis_aries
ENSDARG00000060411	ddx28	92	46.756	ENSPPAG00000036971	DDX28	95	46.756	Pan_paniscus
ENSDARG00000060411	ddx28	90	49.315	ENSPPRG00000018322	DDX28	93	49.315	Panthera_pardus
ENSDARG00000060411	ddx28	90	48.141	ENSPTIG00000006444	DDX28	93	48.141	Panthera_tigris_altaica
ENSDARG00000060411	ddx28	92	49.046	ENSPTRG00000008258	DDX28	95	49.046	Pan_troglodytes
ENSDARG00000060411	ddx28	90	67.653	ENSPKIG00000021200	ddx28	93	67.653	Paramormyrops_kingsleyae
ENSDARG00000060411	ddx28	51	56.842	ENSPSIG00000001127	DDX28	93	57.348	Pelodiscus_sinensis
ENSDARG00000060411	ddx28	93	59.693	ENSPMGG00000007908	ddx28	91	59.693	Periophthalmus_magnuspinnatus
ENSDARG00000060411	ddx28	90	49.027	ENSPEMG00000003395	Ddx28	93	49.027	Peromyscus_maniculatus_bairdii
ENSDARG00000060411	ddx28	98	61.181	ENSPFOG00000020952	ddx28	98	61.181	Poecilia_formosa
ENSDARG00000060411	ddx28	99	60.420	ENSPFOG00000020838	DDX28	99	61.181	Poecilia_formosa
ENSDARG00000060411	ddx28	98	61.002	ENSPLAG00000016292	ddx28	98	61.002	Poecilia_latipinna
ENSDARG00000060411	ddx28	99	60.420	ENSPMEG00000011311	ddx28	98	60.420	Poecilia_mexicana
ENSDARG00000060411	ddx28	99	59.895	ENSPREG00000002899	ddx28	98	59.895	Poecilia_reticulata
ENSDARG00000060411	ddx28	92	48.000	ENSPPYG00000007481	DDX28	96	48.000	Pongo_abelii
ENSDARG00000060411	ddx28	90	49.609	ENSPCOG00000024632	DDX28	93	49.609	Propithecus_coquereli
ENSDARG00000060411	ddx28	98	62.500	ENSPNYG00000018804	ddx28	98	62.500	Pundamilia_nyererei
ENSDARG00000060411	ddx28	92	70.328	ENSPNAG00000014597	ddx28	96	70.328	Pygocentrus_nattereri
ENSDARG00000060411	ddx28	91	49.225	ENSRNOG00000019817	Ddx28	94	49.225	Rattus_norvegicus
ENSDARG00000060411	ddx28	91	63.707	ENSSFOG00015010181	ddx28	93	63.707	Scleropages_formosus
ENSDARG00000060411	ddx28	88	65.594	ENSSMAG00000006831	ddx28	92	65.594	Scophthalmus_maximus
ENSDARG00000060411	ddx28	98	62.923	ENSSDUG00000003257	ddx28	98	62.923	Seriola_dumerili
ENSDARG00000060411	ddx28	98	62.745	ENSSLDG00000004513	ddx28	98	62.745	Seriola_lalandi_dorsalis
ENSDARG00000060411	ddx28	90	50.884	ENSSARG00000014169	DDX28	93	50.884	Sorex_araneus
ENSDARG00000060411	ddx28	98	62.989	ENSSPAG00000000988	ddx28	98	62.989	Stegastes_partitus
ENSDARG00000060411	ddx28	85	50.311	ENSSSCG00000026038	DDX28	93	49.414	Sus_scrofa
ENSDARG00000060411	ddx28	90	63.636	ENSTRUG00000007815	ddx28	91	63.636	Takifugu_rubripes
ENSDARG00000060411	ddx28	90	62.055	ENSTNIG00000011352	ddx28	99	62.055	Tetraodon_nigroviridis
ENSDARG00000060411	ddx28	76	59.174	ENSTBEG00000017695	DDX28	77	59.174	Tupaia_belangeri
ENSDARG00000060411	ddx28	89	49.804	ENSUAMG00000016116	DDX28	93	49.804	Ursus_americanus
ENSDARG00000060411	ddx28	77	50.797	ENSUMAG00000019200	DDX28	88	50.797	Ursus_maritimus
ENSDARG00000060411	ddx28	72	44.660	ENSVVUG00000012876	DDX28	79	44.660	Vulpes_vulpes
ENSDARG00000060411	ddx28	90	47.222	ENSXETG00000005435	ddx28	98	47.222	Xenopus_tropicalis
ENSDARG00000060411	ddx28	97	60.791	ENSXCOG00000012364	ddx28	98	60.791	Xiphophorus_couchianus
ENSDARG00000060411	ddx28	90	64.612	ENSXMAG00000019603	ddx28	91	64.612	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function