EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000060687 (Gene tree)
Gene ID: 569795
Gene Symbol: chd2
Alias: si:ch211-196l7.5
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 56108 bases
Position: chr18:24933473-24989580
Accession: ZDB-GENE-050419-256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000080170	ResIII	PF04851.15	1.5e-06	1	1
ENSDARP00000138660	ResIII	PF04851.15	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000163449	-	7596	XM_009293623	ENSDARP00000138660	1799 (aa)	XP_009291898	A0A0R4IR86
ENSDART00000085735	-	5084	-	ENSDARP00000080170	1694 (aa)	-	Q1LVN0
ENSDART00000136434	-	671	-	ENSDARP00000117007	148 (aa)	-	F1QRB9

Gene Model

Click here to download ENSDARG00000060687's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000060687's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000060687	chd2	100	71.470	ENSG00000173575	CHD2	87	96.939	Homo_sapiens
ENSDARG00000060687	chd2	100	82.794	ENSAPOG00000008913	chd2	100	81.121	Acanthochromis_polyacanthus
ENSDARG00000060687	chd2	68	74.036	ENSAMEG00000010805	-	94	75.413	Ailuropoda_melanoleuca
ENSDARG00000060687	chd2	100	80.903	ENSAOCG00000016332	chd2	76	83.690	Amphiprion_ocellaris
ENSDARG00000060687	chd2	100	82.775	ENSAPEG00000016676	chd2	100	80.828	Amphiprion_percula
ENSDARG00000060687	chd2	100	82.238	ENSATEG00000005246	chd2	100	80.272	Anabas_testudineus
ENSDARG00000060687	chd2	100	72.360	ENSAPLG00000011141	-	100	69.844	Anas_platyrhynchos
ENSDARG00000060687	chd2	98	69.258	ENSACAG00000000088	-	96	68.195	Anolis_carolinensis
ENSDARG00000060687	chd2	100	71.643	ENSANAG00000024017	-	96	70.406	Aotus_nancymaae
ENSDARG00000060687	chd2	96	78.833	ENSACLG00000021370	chd2	73	86.379	Astatotilapia_calliptera
ENSDARG00000060687	chd2	100	71.470	ENSCJAG00000020444	-	96	70.073	Callithrix_jacchus
ENSDARG00000060687	chd2	99	72.284	ENSCAFG00000010998	CHD2	97	72.148	Canis_familiaris
ENSDARG00000060687	chd2	99	70.527	ENSCHIG00000022261	-	96	69.465	Capra_hircus
ENSDARG00000060687	chd2	100	72.161	ENSTSYG00000003272	-	95	72.094	Carlito_syrichta
ENSDARG00000060687	chd2	93	73.493	ENSCPOG00000005800	-	94	75.111	Cavia_porcellus
ENSDARG00000060687	chd2	100	71.643	ENSCCAG00000035304	-	96	70.241	Cebus_capucinus
ENSDARG00000060687	chd2	100	71.354	ENSCATG00000031069	-	96	70.146	Cercocebus_atys
ENSDARG00000060687	chd2	100	71.486	ENSCLAG00000016269	-	96	69.978	Chinchilla_lanigera
ENSDARG00000060687	chd2	100	71.412	ENSCSAG00000017007	-	96	70.202	Chlorocebus_sabaeus
ENSDARG00000060687	chd2	78	72.148	ENSCHOG00000000608	-	76	78.689	Choloepus_hoffmanni
ENSDARG00000060687	chd2	80	77.410	ENSCPBG00000018049	-	95	82.360	Chrysemys_picta_bellii
ENSDARG00000060687	chd2	78	54.227	ENSCSAVG00000007580	-	94	58.236	Ciona_savignyi
ENSDARG00000060687	chd2	100	71.412	ENSCANG00000038126	-	96	70.146	Colobus_angolensis_palliatus
ENSDARG00000060687	chd2	100	72.062	ENSCGRG00001006649	Chd2	96	70.293	Cricetulus_griseus_chok1gshd
ENSDARG00000060687	chd2	100	72.062	ENSCGRG00000018154	Chd2	96	70.293	Cricetulus_griseus_crigri
ENSDARG00000060687	chd2	98	72.625	ENSCSEG00000003646	chd2	92	79.747	Cynoglossus_semilaevis
ENSDARG00000060687	chd2	100	75.687	ENSCVAG00000002427	chd2	100	73.789	Cyprinodon_variegatus
ENSDARG00000060687	chd2	99	72.062	ENSDNOG00000009796	-	96	70.552	Dasypus_novemcinctus
ENSDARG00000060687	chd2	58	68.943	ENSEBUG00000014994	chd2	79	72.340	Eptatretus_burgeri
ENSDARG00000060687	chd2	99	72.012	ENSEASG00005015526	-	97	76.824	Equus_asinus_asinus
ENSDARG00000060687	chd2	100	80.472	ENSELUG00000017981	chd2	97	93.103	Esox_lucius
ENSDARG00000060687	chd2	100	71.659	ENSFALG00000010369	-	96	70.740	Ficedula_albicollis
ENSDARG00000060687	chd2	100	71.371	ENSFDAG00000020651	-	96	69.921	Fukomys_damarensis
ENSDARG00000060687	chd2	95	81.173	ENSFHEG00000002119	chd2	100	78.541	Fundulus_heteroclitus
ENSDARG00000060687	chd2	100	78.837	ENSGMOG00000002890	chd2	99	78.883	Gadus_morhua
ENSDARG00000060687	chd2	100	71.855	ENSGALG00000006949	CHD2	100	69.189	Gallus_gallus
ENSDARG00000060687	chd2	99	75.633	ENSGAFG00000001905	chd2	96	79.250	Gambusia_affinis
ENSDARG00000060687	chd2	100	78.990	ENSGACG00000013246	chd2	99	78.675	Gasterosteus_aculeatus
ENSDARG00000060687	chd2	79	79.406	ENSGAGG00000013176	-	99	82.792	Gopherus_agassizii
ENSDARG00000060687	chd2	100	70.531	ENSGGOG00000015677	CHD2	94	71.661	Gorilla_gorilla
ENSDARG00000060687	chd2	100	83.256	ENSHBUG00000017947	chd2	100	81.496	Haplochromis_burtoni
ENSDARG00000060687	chd2	100	71.239	ENSHGLG00000004435	CHD2	96	69.786	Heterocephalus_glaber_female
ENSDARG00000060687	chd2	100	70.951	ENSHGLG00100016376	-	96	69.504	Heterocephalus_glaber_male
ENSDARG00000060687	chd2	99	71.859	ENSHCOG00000008855	chd2	94	76.623	Hippocampus_comes
ENSDARG00000060687	chd2	98	81.365	ENSIPUG00000000488	chd2	99	79.696	Ictalurus_punctatus
ENSDARG00000060687	chd2	100	72.037	ENSSTOG00000001270	-	96	70.235	Ictidomys_tridecemlineatus
ENSDARG00000060687	chd2	100	71.124	ENSJJAG00000000213	Chd2	96	69.955	Jaculus_jaculus
ENSDARG00000060687	chd2	82	80.581	ENSKMAG00000015849	chd2	99	78.567	Kryptolebias_marmoratus
ENSDARG00000060687	chd2	81	72.218	ENSLAFG00000016885	-	98	81.316	Loxodonta_africana
ENSDARG00000060687	chd2	100	71.412	ENSMFAG00000033343	-	96	70.202	Macaca_fascicularis
ENSDARG00000060687	chd2	100	71.412	ENSMMUG00000011782	-	96	70.202	Macaca_mulatta
ENSDARG00000060687	chd2	100	71.215	ENSMNEG00000036875	-	96	70.011	Macaca_nemestrina
ENSDARG00000060687	chd2	100	71.412	ENSMLEG00000035026	-	96	70.202	Mandrillus_leucophaeus
ENSDARG00000060687	chd2	100	83.460	ENSMAMG00000009082	chd2	100	81.569	Mastacembelus_armatus
ENSDARG00000060687	chd2	96	78.833	ENSMZEG00005021333	chd2	73	86.379	Maylandia_zebra
ENSDARG00000060687	chd2	99	71.877	ENSMGAG00000008966	-	97	70.335	Meleagris_gallopavo
ENSDARG00000060687	chd2	99	71.254	ENSMICG00000000332	-	96	69.399	Microcebus_murinus
ENSDARG00000060687	chd2	100	71.774	ENSMOCG00000015124	Chd2	96	70.141	Microtus_ochrogaster
ENSDARG00000060687	chd2	100	73.287	ENSMODG00000013158	-	100	70.307	Monodelphis_domestica
ENSDARG00000060687	chd2	95	79.635	ENSMALG00000007755	chd2	95	80.926	Monopterus_albus
ENSDARG00000060687	chd2	100	72.120	MGP_CAROLIEiJ_G0029860	Chd2	96	70.462	Mus_caroli
ENSDARG00000060687	chd2	100	71.717	ENSMUSG00000078671	Chd2	96	70.349	Mus_musculus
ENSDARG00000060687	chd2	100	71.906	MGP_PahariEiJ_G0013082	Chd2	96	70.479	Mus_pahari
ENSDARG00000060687	chd2	100	72.120	MGP_SPRETEiJ_G0030962	Chd2	96	70.406	Mus_spretus
ENSDARG00000060687	chd2	100	71.931	ENSMPUG00000017577	-	96	70.519	Mustela_putorius_furo
ENSDARG00000060687	chd2	100	70.497	ENSMLUG00000009292	-	96	69.582	Myotis_lucifugus
ENSDARG00000060687	chd2	100	70.778	ENSNGAG00000010792	Chd2	96	70.068	Nannospalax_galili
ENSDARG00000060687	chd2	95	80.825	ENSNBRG00000020591	chd2	97	81.326	Neolamprologus_brichardi
ENSDARG00000060687	chd2	100	69.297	ENSNLEG00000012349	-	95	68.758	Nomascus_leucogenys
ENSDARG00000060687	chd2	77	77.267	ENSMEUG00000001522	-	72	77.004	Notamacropus_eugenii
ENSDARG00000060687	chd2	100	70.735	ENSODEG00000016028	-	96	69.239	Octodon_degus
ENSDARG00000060687	chd2	100	83.488	ENSONIG00000015136	chd2	100	81.659	Oreochromis_niloticus
ENSDARG00000060687	chd2	86	71.642	ENSOANG00000004385	-	99	76.311	Ornithorhynchus_anatinus
ENSDARG00000060687	chd2	100	67.795	ENSOCUG00000001628	-	93	75.361	Oryctolagus_cuniculus
ENSDARG00000060687	chd2	100	80.820	ENSORLG00000008403	chd2	100	80.022	Oryzias_latipes
ENSDARG00000060687	chd2	100	80.972	ENSORLG00020004138	chd2	100	80.218	Oryzias_latipes_hni
ENSDARG00000060687	chd2	100	75.598	ENSOMEG00000005831	chd2	100	73.597	Oryzias_melastigma
ENSDARG00000060687	chd2	100	69.683	ENSOGAG00000010399	-	96	68.294	Otolemur_garnettii
ENSDARG00000060687	chd2	99	71.786	ENSOARG00000010343	-	95	69.933	Ovis_aries
ENSDARG00000060687	chd2	100	70.893	ENSPPAG00000030381	-	96	69.656	Pan_paniscus
ENSDARG00000060687	chd2	100	71.470	ENSPTRG00000007478	CHD2	96	70.258	Pan_troglodytes
ENSDARG00000060687	chd2	100	68.588	ENSPANG00000033355	-	96	67.606	Papio_anubis
ENSDARG00000060687	chd2	100	82.753	ENSPKIG00000000495	chd2	100	81.605	Paramormyrops_kingsleyae
ENSDARG00000060687	chd2	82	79.553	ENSPMGG00000009941	chd2	99	76.234	Periophthalmus_magnuspinnatus
ENSDARG00000060687	chd2	100	71.832	ENSPEMG00000019507	Chd2	96	70.180	Peromyscus_maniculatus_bairdii
ENSDARG00000060687	chd2	90	75.496	ENSPCIG00000009417	-	99	77.390	Phascolarctos_cinereus
ENSDARG00000060687	chd2	100	82.928	ENSPFOG00000007050	chd2	100	81.080	Poecilia_formosa
ENSDARG00000060687	chd2	100	83.140	ENSPLAG00000005067	chd2	100	81.277	Poecilia_latipinna
ENSDARG00000060687	chd2	100	82.928	ENSPMEG00000019628	chd2	100	81.080	Poecilia_mexicana
ENSDARG00000060687	chd2	100	70.202	ENSPPYG00000006799	-	96	69.024	Pongo_abelii
ENSDARG00000060687	chd2	100	71.947	ENSPCOG00000028084	-	96	70.310	Propithecus_coquereli
ENSDARG00000060687	chd2	96	78.878	ENSPNYG00000010273	chd2	73	86.540	Pundamilia_nyererei
ENSDARG00000060687	chd2	77	83.371	ENSPNAG00000016719	chd2	73	83.205	Pygocentrus_nattereri
ENSDARG00000060687	chd2	100	72.062	ENSRNOG00000012716	Chd2	96	70.349	Rattus_norvegicus
ENSDARG00000060687	chd2	100	69.919	ENSRBIG00000036875	-	96	68.673	Rhinopithecus_bieti
ENSDARG00000060687	chd2	100	71.527	ENSRROG00000041087	-	96	70.314	Rhinopithecus_roxellana
ENSDARG00000060687	chd2	100	71.643	ENSSBOG00000023754	-	96	70.241	Saimiri_boliviensis_boliviensis
ENSDARG00000060687	chd2	100	73.460	ENSSHAG00000012513	-	100	70.683	Sarcophilus_harrisii
ENSDARG00000060687	chd2	100	84.562	ENSSFOG00015023759	chd2	100	83.197	Scleropages_formosus
ENSDARG00000060687	chd2	100	81.535	ENSSMAG00000001726	chd2	98	82.278	Scophthalmus_maximus
ENSDARG00000060687	chd2	89	82.759	ENSSLDG00000001146	chd2	98	80.498	Seriola_lalandi_dorsalis
ENSDARG00000060687	chd2	80	81.667	ENSSARG00000014112	-	75	81.667	Sorex_araneus
ENSDARG00000060687	chd2	99	69.330	ENSSPUG00000011266	-	90	72.991	Sphenodon_punctatus
ENSDARG00000060687	chd2	100	72.005	ENSSSCG00000002266	-	99	72.028	Sus_scrofa
ENSDARG00000060687	chd2	100	71.280	ENSTGUG00000008540	-	96	70.314	Taeniopygia_guttata
ENSDARG00000060687	chd2	89	79.631	ENSTRUG00000008842	chd2	91	78.586	Takifugu_rubripes
ENSDARG00000060687	chd2	88	82.511	ENSTNIG00000010760	chd2	97	81.226	Tetraodon_nigroviridis
ENSDARG00000060687	chd2	77	69.604	ENSTBEG00000017730	-	74	68.421	Tupaia_belangeri
ENSDARG00000060687	chd2	90	73.256	ENSTTRG00000000430	-	90	71.881	Tursiops_truncatus
ENSDARG00000060687	chd2	100	70.792	ENSUMAG00000000083	-	96	69.859	Ursus_maritimus
ENSDARG00000060687	chd2	86	85.714	ENSVPAG00000009645	-	82	85.533	Vicugna_pacos
ENSDARG00000060687	chd2	89	68.790	ENSXETG00000024129	chd2	92	76.112	Xenopus_tropicalis
ENSDARG00000060687	chd2	96	81.014	ENSXCOG00000020255	chd2	98	79.296	Xiphophorus_couchianus
ENSDARG00000060687	chd2	100	82.339	ENSXMAG00000002707	chd2	100	80.960	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0040011	locomotion	24207121.	IMP	Process
GO:0043009	chordate embryonic development	24207121.	IMP	Process