EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000060748 (Gene tree)
Gene ID: 567785
Gene Symbol: tsfm
Alias: zgc:158429
Full Name: Ts translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 5889 bases
Position: chr6:39897543-39903431
Accession: ZDB-GENE-061215-17
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000080380	EF_TS	PF00889.19	5.6e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000085945	-	1680	-	ENSDARP00000080380	303 (aa)	-	F1Q963
ENSDART00000149794	-	905	-	-	- (aa)	-	-
ENSDART00000148612	-	922	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000060748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000060748's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000060748	tsfm	96	45.075	ENSG00000123297	TSFM	100	59.155	Homo_sapiens
ENSDARG00000060748	tsfm	99	68.212	ENSAPOG00000014844	tsfm	98	68.212	Acanthochromis_polyacanthus
ENSDARG00000060748	tsfm	87	51.460	ENSAMEG00000005452	TSFM	85	51.799	Ailuropoda_melanoleuca
ENSDARG00000060748	tsfm	99	65.781	ENSACIG00000001066	tsfm	97	66.107	Amphilophus_citrinellus
ENSDARG00000060748	tsfm	99	67.219	ENSAOCG00000007132	tsfm	98	67.219	Amphiprion_ocellaris
ENSDARG00000060748	tsfm	99	67.219	ENSAPEG00000015755	tsfm	98	67.219	Amphiprion_percula
ENSDARG00000060748	tsfm	99	66.887	ENSATEG00000001497	tsfm	98	66.887	Anabas_testudineus
ENSDARG00000060748	tsfm	98	50.325	ENSACAG00000013044	TSFM	94	50.325	Anolis_carolinensis
ENSDARG00000060748	tsfm	96	45.808	ENSANAG00000038019	TSFM	97	46.154	Aotus_nancymaae
ENSDARG00000060748	tsfm	98	66.890	ENSACLG00000000139	tsfm	97	66.890	Astatotilapia_calliptera
ENSDARG00000060748	tsfm	99	69.103	ENSAMXG00000001713	tsfm	98	69.103	Astyanax_mexicanus
ENSDARG00000060748	tsfm	87	50.916	ENSBTAG00000016912	TSFM	72	50.719	Bos_taurus
ENSDARG00000060748	tsfm	87	34.589	WBGene00010094	tsfm-1	91	34.589	Caenorhabditis_elegans
ENSDARG00000060748	tsfm	89	50.355	ENSCJAG00000006600	TSFM	83	55.357	Callithrix_jacchus
ENSDARG00000060748	tsfm	50	42.038	ENSCAFG00000007218	-	92	42.857	Canis_familiaris
ENSDARG00000060748	tsfm	89	51.429	ENSCAFG00000000293	-	87	51.761	Canis_familiaris
ENSDARG00000060748	tsfm	89	51.429	ENSCAFG00020022844	TSFM	68	51.761	Canis_lupus_dingo
ENSDARG00000060748	tsfm	87	50.916	ENSCHIG00000013850	TSFM	97	47.634	Capra_hircus
ENSDARG00000060748	tsfm	75	50.211	ENSTSYG00000028892	TSFM	90	50.628	Carlito_syrichta
ENSDARG00000060748	tsfm	61	40.741	ENSCAPG00000007733	-	95	41.451	Cavia_aperea
ENSDARG00000060748	tsfm	87	52.555	ENSCPOG00000037732	TSFM	84	52.878	Cavia_porcellus
ENSDARG00000060748	tsfm	89	51.064	ENSCCAG00000033254	TSFM	87	51.399	Cebus_capucinus
ENSDARG00000060748	tsfm	96	47.452	ENSCATG00000016867	TSFM	99	49.500	Cercocebus_atys
ENSDARG00000060748	tsfm	89	49.286	ENSCLAG00000009226	TSFM	87	49.648	Chinchilla_lanigera
ENSDARG00000060748	tsfm	87	51.838	ENSCSAG00000004601	TSFM	84	52.174	Chlorocebus_sabaeus
ENSDARG00000060748	tsfm	53	68.571	ENSCHOG00000002360	TSFM	65	66.372	Choloepus_hoffmanni
ENSDARG00000060748	tsfm	97	52.131	ENSCPBG00000018147	TSFM	91	52.131	Chrysemys_picta_bellii
ENSDARG00000060748	tsfm	88	34.459	ENSCING00000001275	-	89	34.459	Ciona_intestinalis
ENSDARG00000060748	tsfm	68	35.211	ENSCSAVG00000007722	-	99	35.211	Ciona_savignyi
ENSDARG00000060748	tsfm	82	48.638	ENSCANG00000030298	TSFM	91	49.042	Colobus_angolensis_palliatus
ENSDARG00000060748	tsfm	96	50.498	ENSCGRG00001023000	TSFM	94	50.163	Cricetulus_griseus_chok1gshd
ENSDARG00000060748	tsfm	96	50.498	ENSCGRG00000006566	TSFM	94	50.163	Cricetulus_griseus_crigri
ENSDARG00000060748	tsfm	79	66.250	ENSCSEG00000003376	tsfm	84	66.250	Cynoglossus_semilaevis
ENSDARG00000060748	tsfm	99	64.901	ENSCVAG00000001340	tsfm	98	64.901	Cyprinodon_variegatus
ENSDARG00000060748	tsfm	87	50.741	ENSDNOG00000049415	TSFM	86	50.538	Dasypus_novemcinctus
ENSDARG00000060748	tsfm	77	51.440	ENSDORG00000007272	Tsfm	91	51.440	Dipodomys_ordii
ENSDARG00000060748	tsfm	89	37.993	FBgn0032646	mEFTs	87	37.993	Drosophila_melanogaster
ENSDARG00000060748	tsfm	90	51.408	ENSETEG00000002686	-	87	51.748	Echinops_telfairi
ENSDARG00000060748	tsfm	87	50.730	ENSEASG00005007292	TSFM	67	51.079	Equus_asinus_asinus
ENSDARG00000060748	tsfm	87	51.095	ENSECAG00000010520	TSFM	75	51.439	Equus_caballus
ENSDARG00000060748	tsfm	57	51.872	ENSEEUG00000004147	-	99	51.872	Erinaceus_europaeus
ENSDARG00000060748	tsfm	98	71.333	ENSELUG00000015481	tsfm	97	71.333	Esox_lucius
ENSDARG00000060748	tsfm	89	50.709	ENSFCAG00000023794	TSFM	87	51.049	Felis_catus
ENSDARG00000060748	tsfm	91	50.871	ENSFDAG00000016548	TSFM	88	50.871	Fukomys_damarensis
ENSDARG00000060748	tsfm	99	66.556	ENSFHEG00000013458	tsfm	98	66.556	Fundulus_heteroclitus
ENSDARG00000060748	tsfm	97	64.068	ENSGMOG00000000868	tsfm	100	64.068	Gadus_morhua
ENSDARG00000060748	tsfm	98	66.779	ENSGAFG00000021764	tsfm	97	66.779	Gambusia_affinis
ENSDARG00000060748	tsfm	95	67.698	ENSGACG00000000697	tsfm	94	67.698	Gasterosteus_aculeatus
ENSDARG00000060748	tsfm	89	53.381	ENSGAGG00000020897	TSFM	84	53.381	Gopherus_agassizii
ENSDARG00000060748	tsfm	96	48.089	ENSGGOG00000001415	TSFM	97	48.428	Gorilla_gorilla
ENSDARG00000060748	tsfm	98	66.555	ENSHBUG00000021738	tsfm	97	66.555	Haplochromis_burtoni
ENSDARG00000060748	tsfm	89	52.878	ENSHGLG00000008559	TSFM	97	49.686	Heterocephalus_glaber_female
ENSDARG00000060748	tsfm	89	52.878	ENSHGLG00100005643	TSFM	97	49.686	Heterocephalus_glaber_male
ENSDARG00000060748	tsfm	99	66.007	ENSHCOG00000021049	tsfm	98	66.007	Hippocampus_comes
ENSDARG00000060748	tsfm	89	52.593	ENSIPUG00000019836	tsfm	79	52.593	Ictalurus_punctatus
ENSDARG00000060748	tsfm	87	52.381	ENSSTOG00000001159	TSFM	84	51.812	Ictidomys_tridecemlineatus
ENSDARG00000060748	tsfm	89	51.071	ENSJJAG00000012907	Tsfm	85	51.071	Jaculus_jaculus
ENSDARG00000060748	tsfm	99	65.232	ENSKMAG00000018906	tsfm	99	64.590	Kryptolebias_marmoratus
ENSDARG00000060748	tsfm	99	65.563	ENSLBEG00000019779	tsfm	98	65.563	Labrus_bergylta
ENSDARG00000060748	tsfm	97	51.485	ENSLACG00000018125	TSFM	94	51.485	Latimeria_chalumnae
ENSDARG00000060748	tsfm	98	46.885	ENSLOCG00000006608	tsfm	96	47.213	Lepisosteus_oculatus
ENSDARG00000060748	tsfm	91	51.568	ENSLAFG00000015177	TSFM	88	51.568	Loxodonta_africana
ENSDARG00000060748	tsfm	96	47.452	ENSMFAG00000036132	TSFM	99	49.500	Macaca_fascicularis
ENSDARG00000060748	tsfm	96	47.452	ENSMMUG00000005893	TSFM	99	49.500	Macaca_mulatta
ENSDARG00000060748	tsfm	96	47.452	ENSMNEG00000026351	TSFM	99	49.500	Macaca_nemestrina
ENSDARG00000060748	tsfm	96	47.452	ENSMLEG00000029811	TSFM	99	49.500	Mandrillus_leucophaeus
ENSDARG00000060748	tsfm	100	64.918	ENSMAMG00000002230	tsfm	99	64.918	Mastacembelus_armatus
ENSDARG00000060748	tsfm	98	66.555	ENSMZEG00005008170	tsfm	97	66.555	Maylandia_zebra
ENSDARG00000060748	tsfm	97	50.993	ENSMAUG00000011705	Tsfm	92	50.993	Mesocricetus_auratus
ENSDARG00000060748	tsfm	86	51.685	ENSMICG00000003812	TSFM	85	51.812	Microcebus_murinus
ENSDARG00000060748	tsfm	96	50.000	ENSMOCG00000006104	Tsfm	92	50.166	Microtus_ochrogaster
ENSDARG00000060748	tsfm	99	65.894	ENSMMOG00000021854	tsfm	98	65.894	Mola_mola
ENSDARG00000060748	tsfm	98	51.466	ENSMODG00000021351	TSFM	93	51.466	Monodelphis_domestica
ENSDARG00000060748	tsfm	99	66.225	ENSMALG00000015046	tsfm	98	66.225	Monopterus_albus
ENSDARG00000060748	tsfm	98	50.633	MGP_CAROLIEiJ_G0015873	Tsfm	97	50.633	Mus_caroli
ENSDARG00000060748	tsfm	98	50.476	ENSMUSG00000040521	Tsfm	98	54.497	Mus_musculus
ENSDARG00000060748	tsfm	97	51.333	MGP_PahariEiJ_G0031212	Tsfm	90	56.322	Mus_pahari
ENSDARG00000060748	tsfm	98	50.949	MGP_SPRETEiJ_G0016699	Tsfm	98	55.026	Mus_spretus
ENSDARG00000060748	tsfm	87	51.095	ENSMPUG00000002051	TSFM	85	51.439	Mustela_putorius_furo
ENSDARG00000060748	tsfm	87	52.555	ENSMLUG00000005940	TSFM	86	52.878	Myotis_lucifugus
ENSDARG00000060748	tsfm	87	50.916	ENSNGAG00000014356	Tsfm	87	50.000	Nannospalax_galili
ENSDARG00000060748	tsfm	98	66.555	ENSNBRG00000016413	tsfm	97	66.555	Neolamprologus_brichardi
ENSDARG00000060748	tsfm	96	48.089	ENSNLEG00000017178	TSFM	97	48.428	Nomascus_leucogenys
ENSDARG00000060748	tsfm	67	65.000	ENSMEUG00000004047	TSFM	61	65.000	Notamacropus_eugenii
ENSDARG00000060748	tsfm	92	46.602	ENSOPRG00000006670	TSFM	88	46.945	Ochotona_princeps
ENSDARG00000060748	tsfm	88	53.430	ENSODEG00000001882	TSFM	85	53.405	Octodon_degus
ENSDARG00000060748	tsfm	98	59.667	ENSONIG00000019100	tsfm	96	59.667	Oreochromis_niloticus
ENSDARG00000060748	tsfm	86	48.110	ENSOCUG00000012512	TSFM	78	45.317	Oryctolagus_cuniculus
ENSDARG00000060748	tsfm	99	60.927	ENSORLG00000030201	tsfm	97	60.927	Oryzias_latipes
ENSDARG00000060748	tsfm	93	63.509	ENSORLG00020004740	tsfm	97	60.927	Oryzias_latipes_hni
ENSDARG00000060748	tsfm	93	63.158	ENSORLG00015022703	tsfm	97	60.596	Oryzias_latipes_hsok
ENSDARG00000060748	tsfm	99	64.262	ENSOMEG00000008934	tsfm	97	64.262	Oryzias_melastigma
ENSDARG00000060748	tsfm	97	48.580	ENSOGAG00000012235	TSFM	97	48.580	Otolemur_garnettii
ENSDARG00000060748	tsfm	87	51.282	ENSOARG00000005095	TSFM	82	51.079	Ovis_aries
ENSDARG00000060748	tsfm	96	47.771	ENSPPAG00000043428	TSFM	97	48.113	Pan_paniscus
ENSDARG00000060748	tsfm	89	50.709	ENSPPRG00000009667	TSFM	87	51.049	Panthera_pardus
ENSDARG00000060748	tsfm	89	50.709	ENSPTIG00000015290	TSFM	87	51.049	Panthera_tigris_altaica
ENSDARG00000060748	tsfm	96	47.771	ENSPTRG00000005152	TSFM	97	48.113	Pan_troglodytes
ENSDARG00000060748	tsfm	96	45.373	ENSPANG00000007866	TSFM	99	49.500	Papio_anubis
ENSDARG00000060748	tsfm	99	63.696	ENSPKIG00000008495	tsfm	94	63.696	Paramormyrops_kingsleyae
ENSDARG00000060748	tsfm	64	46.829	ENSPSIG00000015776	TSFM	94	46.829	Pelodiscus_sinensis
ENSDARG00000060748	tsfm	99	65.232	ENSPMGG00000007022	tsfm	98	65.232	Periophthalmus_magnuspinnatus
ENSDARG00000060748	tsfm	96	50.498	ENSPEMG00000000414	Tsfm	94	50.000	Peromyscus_maniculatus_bairdii
ENSDARG00000060748	tsfm	90	51.601	ENSPCIG00000023619	TSFM	88	51.601	Phascolarctos_cinereus
ENSDARG00000060748	tsfm	98	66.107	ENSPFOG00000010782	tsfm	97	66.107	Poecilia_formosa
ENSDARG00000060748	tsfm	99	65.781	ENSPLAG00000008105	tsfm	98	65.781	Poecilia_latipinna
ENSDARG00000060748	tsfm	98	66.107	ENSPMEG00000002567	tsfm	97	66.107	Poecilia_mexicana
ENSDARG00000060748	tsfm	98	65.772	ENSPREG00000016696	tsfm	97	65.772	Poecilia_reticulata
ENSDARG00000060748	tsfm	96	48.408	ENSPPYG00000004708	TSFM	83	48.742	Pongo_abelii
ENSDARG00000060748	tsfm	88	51.056	ENSPCAG00000003789	TSFM	85	51.049	Procavia_capensis
ENSDARG00000060748	tsfm	89	52.158	ENSPCOG00000021606	TSFM	86	52.482	Propithecus_coquereli
ENSDARG00000060748	tsfm	89	49.645	ENSPVAG00000012141	TSFM	97	47.799	Pteropus_vampyrus
ENSDARG00000060748	tsfm	98	66.555	ENSPNYG00000001230	tsfm	97	66.555	Pundamilia_nyererei
ENSDARG00000060748	tsfm	99	70.333	ENSPNAG00000003241	tsfm	98	70.333	Pygocentrus_nattereri
ENSDARG00000060748	tsfm	94	48.630	ENSRNOG00000048843	Tsfm	91	48.630	Rattus_norvegicus
ENSDARG00000060748	tsfm	89	51.064	ENSRBIG00000037278	TSFM	83	55.952	Rhinopithecus_bieti
ENSDARG00000060748	tsfm	96	48.726	ENSRROG00000031769	TSFM	99	51.500	Rhinopithecus_roxellana
ENSDARG00000060748	tsfm	89	44.286	ENSSBOG00000021465	TSFM	87	44.718	Saimiri_boliviensis_boliviensis
ENSDARG00000060748	tsfm	88	53.261	ENSSHAG00000009664	TSFM	80	53.261	Sarcophilus_harrisii
ENSDARG00000060748	tsfm	98	65.781	ENSSFOG00015014457	tsfm	97	65.781	Scleropages_formosus
ENSDARG00000060748	tsfm	99	67.881	ENSSMAG00000002467	tsfm	98	67.881	Scophthalmus_maximus
ENSDARG00000060748	tsfm	97	68.350	ENSSDUG00000006833	tsfm	96	68.350	Seriola_dumerili
ENSDARG00000060748	tsfm	97	69.463	ENSSLDG00000000715	tsfm	96	69.463	Seriola_lalandi_dorsalis
ENSDARG00000060748	tsfm	69	48.438	ENSSARG00000000785	-	68	48.718	Sorex_araneus
ENSDARG00000060748	tsfm	86	51.481	ENSSPUG00000006435	TSFM	97	51.481	Sphenodon_punctatus
ENSDARG00000060748	tsfm	99	64.901	ENSSPAG00000002548	tsfm	98	64.901	Stegastes_partitus
ENSDARG00000060748	tsfm	89	51.799	ENSSSCG00000037767	TSFM	73	52.143	Sus_scrofa
ENSDARG00000060748	tsfm	96	66.781	ENSTRUG00000003081	tsfm	97	66.781	Takifugu_rubripes
ENSDARG00000060748	tsfm	98	66.216	ENSTNIG00000014578	tsfm	97	66.216	Tetraodon_nigroviridis
ENSDARG00000060748	tsfm	77	65.217	ENSTBEG00000011603	TSFM	70	65.217	Tupaia_belangeri
ENSDARG00000060748	tsfm	89	51.079	ENSTTRG00000008351	TSFM	97	47.368	Tursiops_truncatus
ENSDARG00000060748	tsfm	87	51.460	ENSUAMG00000013142	TSFM	97	49.371	Ursus_americanus
ENSDARG00000060748	tsfm	87	51.460	ENSUMAG00000020123	TSFM	97	49.371	Ursus_maritimus
ENSDARG00000060748	tsfm	67	67.089	ENSVPAG00000000209	TSFM	63	67.089	Vicugna_pacos
ENSDARG00000060748	tsfm	86	50.741	ENSVVUG00000016735	TSFM	87	51.095	Vulpes_vulpes
ENSDARG00000060748	tsfm	92	51.903	ENSXETG00000009653	tsfm	98	51.903	Xenopus_tropicalis
ENSDARG00000060748	tsfm	98	65.772	ENSXMAG00000018468	tsfm	97	65.772	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003746	translation elongation factor activity	21873635.	IBA	Function
GO:0003746	translation elongation factor activity	-	IEA	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0005759	mitochondrial matrix	21873635.	IBA	Component
GO:0006412	translation	-	IEA	Process
GO:0006414	translational elongation	-	IEA	Process
GO:0070125	mitochondrial translational elongation	21873635.	IBA	Process