EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000060992 (Gene tree)
Gene ID: 565088
Gene Symbol: rpusd2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 7357 bases
Position: chr17:31205064-31212420
Accession: ZDB-GENE-120411-43
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000080946	PseudoU_synth_2	PF00849.22	2.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000086511	-	1995	-	ENSDARP00000080946	591 (aa)	-	E7FFJ5

Gene Model

Click here to download ENSDARG00000060992's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000060992's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000060992	rpusd2	81	58.385	ENSG00000166133	RPUSD2	93	51.875	Homo_sapiens
ENSDARG00000060992	rpusd2	91	63.187	ENSAPOG00000000817	rpusd2	93	63.187	Acanthochromis_polyacanthus
ENSDARG00000060992	rpusd2	86	55.206	ENSAMEG00000016996	RPUSD2	80	58.606	Ailuropoda_melanoleuca
ENSDARG00000060992	rpusd2	84	68.889	ENSACIG00000024029	rpusd2	95	68.485	Amphilophus_citrinellus
ENSDARG00000060992	rpusd2	93	62.434	ENSAOCG00000015237	rpusd2	96	62.610	Amphiprion_ocellaris
ENSDARG00000060992	rpusd2	93	62.081	ENSAPEG00000021763	rpusd2	96	62.257	Amphiprion_percula
ENSDARG00000060992	rpusd2	95	61.745	ENSATEG00000015242	rpusd2	97	61.307	Anabas_testudineus
ENSDARG00000060992	rpusd2	74	59.909	ENSAPLG00000004723	RPUSD2	99	59.410	Anas_platyrhynchos
ENSDARG00000060992	rpusd2	76	60.398	ENSACAG00000013893	RPUSD2	91	60.398	Anolis_carolinensis
ENSDARG00000060992	rpusd2	87	55.238	ENSANAG00000009691	RPUSD2	81	59.956	Aotus_nancymaae
ENSDARG00000060992	rpusd2	86	65.275	ENSACLG00000019531	rpusd2	91	66.034	Astatotilapia_calliptera
ENSDARG00000060992	rpusd2	84	69.318	ENSAMXG00000013376	rpusd2	87	68.750	Astyanax_mexicanus
ENSDARG00000060992	rpusd2	81	58.282	ENSBTAG00000003193	RPUSD2	79	58.422	Bos_taurus
ENSDARG00000060992	rpusd2	71	32.936	WBGene00019498	K07E8.7	97	32.697	Caenorhabditis_elegans
ENSDARG00000060992	rpusd2	87	54.528	ENSCJAG00000020841	RPUSD2	92	54.493	Callithrix_jacchus
ENSDARG00000060992	rpusd2	82	56.996	ENSCAFG00000009165	RPUSD2	79	58.388	Canis_familiaris
ENSDARG00000060992	rpusd2	82	56.996	ENSCAFG00020005849	RPUSD2	79	58.388	Canis_lupus_dingo
ENSDARG00000060992	rpusd2	81	58.351	ENSCHIG00000006152	RPUSD2	79	59.737	Capra_hircus
ENSDARG00000060992	rpusd2	92	52.867	ENSTSYG00000012844	RPUSD2	81	58.043	Carlito_syrichta
ENSDARG00000060992	rpusd2	82	57.637	ENSCPOG00000013201	RPUSD2	86	57.645	Cavia_porcellus
ENSDARG00000060992	rpusd2	87	55.238	ENSCCAG00000024378	RPUSD2	81	59.956	Cebus_capucinus
ENSDARG00000060992	rpusd2	81	58.969	ENSCATG00000043734	RPUSD2	81	60.480	Cercocebus_atys
ENSDARG00000060992	rpusd2	82	58.557	ENSCLAG00000011862	RPUSD2	81	59.657	Chinchilla_lanigera
ENSDARG00000060992	rpusd2	81	58.969	ENSCSAG00000007538	RPUSD2	86	60.480	Chlorocebus_sabaeus
ENSDARG00000060992	rpusd2	61	56.164	ENSCHOG00000004834	RPUSD2	63	54.945	Choloepus_hoffmanni
ENSDARG00000060992	rpusd2	79	60.000	ENSCPBG00000013419	RPUSD2	87	61.325	Chrysemys_picta_bellii
ENSDARG00000060992	rpusd2	81	59.175	ENSCANG00000003659	RPUSD2	81	60.699	Colobus_angolensis_palliatus
ENSDARG00000060992	rpusd2	82	56.883	ENSCGRG00001009839	Rpusd2	77	59.170	Cricetulus_griseus_chok1gshd
ENSDARG00000060992	rpusd2	82	56.883	ENSCGRG00000012348	Rpusd2	79	59.170	Cricetulus_griseus_crigri
ENSDARG00000060992	rpusd2	84	64.535	ENSCSEG00000001953	rpusd2	79	67.462	Cynoglossus_semilaevis
ENSDARG00000060992	rpusd2	84	69.819	ENSCVAG00000010848	rpusd2	87	69.495	Cyprinodon_variegatus
ENSDARG00000060992	rpusd2	96	50.346	ENSDNOG00000047745	RPUSD2	81	57.826	Dasypus_novemcinctus
ENSDARG00000060992	rpusd2	76	59.513	ENSDORG00000009092	Rpusd2	100	59.071	Dipodomys_ordii
ENSDARG00000060992	rpusd2	74	46.320	FBgn0051719	RluA-1	62	46.320	Drosophila_melanogaster
ENSDARG00000060992	rpusd2	81	44.792	FBgn0032256	RluA-2	77	46.437	Drosophila_melanogaster
ENSDARG00000060992	rpusd2	81	58.542	ENSETEG00000008581	RPUSD2	82	59.348	Echinops_telfairi
ENSDARG00000060992	rpusd2	73	34.318	ENSEBUG00000012149	rpusd2	54	38.686	Eptatretus_burgeri
ENSDARG00000060992	rpusd2	81	58.058	ENSEASG00005016463	RPUSD2	79	58.913	Equus_asinus_asinus
ENSDARG00000060992	rpusd2	81	57.645	ENSECAG00000024178	RPUSD2	79	58.747	Equus_caballus
ENSDARG00000060992	rpusd2	79	50.529	ENSEEUG00000005132	RPUSD2	83	50.985	Erinaceus_europaeus
ENSDARG00000060992	rpusd2	90	64.168	ENSELUG00000016786	rpusd2	97	64.168	Esox_lucius
ENSDARG00000060992	rpusd2	82	58.045	ENSFCAG00000040796	RPUSD2	79	59.957	Felis_catus
ENSDARG00000060992	rpusd2	75	61.798	ENSFALG00000001122	RPUSD2	96	62.198	Ficedula_albicollis
ENSDARG00000060992	rpusd2	86	55.577	ENSFDAG00000003070	RPUSD2	86	59.565	Fukomys_damarensis
ENSDARG00000060992	rpusd2	83	68.347	ENSFHEG00000007518	rpusd2	87	67.677	Fundulus_heteroclitus
ENSDARG00000060992	rpusd2	82	65.261	ENSGMOG00000011014	rpusd2	98	65.726	Gadus_morhua
ENSDARG00000060992	rpusd2	78	61.373	ENSGALG00000041216	RPUSD2	94	61.087	Gallus_gallus
ENSDARG00000060992	rpusd2	86	67.710	ENSGAFG00000003390	rpusd2	87	67.710	Gambusia_affinis
ENSDARG00000060992	rpusd2	82	67.000	ENSGACG00000008656	rpusd2	94	67.000	Gasterosteus_aculeatus
ENSDARG00000060992	rpusd2	79	61.181	ENSGAGG00000013098	RPUSD2	84	62.445	Gopherus_agassizii
ENSDARG00000060992	rpusd2	81	58.351	ENSGGOG00000006684	RPUSD2	80	59.002	Gorilla_gorilla
ENSDARG00000060992	rpusd2	84	67.465	ENSHBUG00000023777	rpusd2	87	68.263	Haplochromis_burtoni
ENSDARG00000060992	rpusd2	85	56.175	ENSHGLG00000012765	RPUSD2	80	59.081	Heterocephalus_glaber_female
ENSDARG00000060992	rpusd2	85	56.175	ENSHGLG00100006653	RPUSD2	80	59.081	Heterocephalus_glaber_male
ENSDARG00000060992	rpusd2	82	68.024	ENSHCOG00000015587	rpusd2	82	68.024	Hippocampus_comes
ENSDARG00000060992	rpusd2	85	71.765	ENSIPUG00000021006	rpusd2	85	71.373	Ictalurus_punctatus
ENSDARG00000060992	rpusd2	81	58.628	ENSSTOG00000025619	RPUSD2	79	60.044	Ictidomys_tridecemlineatus
ENSDARG00000060992	rpusd2	77	59.653	ENSJJAG00000023160	Rpusd2	98	52.364	Jaculus_jaculus
ENSDARG00000060992	rpusd2	83	68.072	ENSKMAG00000006618	rpusd2	85	66.992	Kryptolebias_marmoratus
ENSDARG00000060992	rpusd2	84	65.949	ENSLBEG00000021571	rpusd2	87	66.600	Labrus_bergylta
ENSDARG00000060992	rpusd2	77	60.907	ENSLACG00000017338	RPUSD2	100	60.480	Latimeria_chalumnae
ENSDARG00000060992	rpusd2	86	64.188	ENSLOCG00000014755	rpusd2	99	63.796	Lepisosteus_oculatus
ENSDARG00000060992	rpusd2	84	56.313	ENSLAFG00000015588	RPUSD2	82	58.553	Loxodonta_africana
ENSDARG00000060992	rpusd2	81	58.969	ENSMFAG00000045062	RPUSD2	81	60.480	Macaca_fascicularis
ENSDARG00000060992	rpusd2	81	58.969	ENSMMUG00000001483	RPUSD2	81	60.480	Macaca_mulatta
ENSDARG00000060992	rpusd2	81	51.423	ENSMNEG00000041429	RPUSD2	81	52.473	Macaca_nemestrina
ENSDARG00000060992	rpusd2	62	57.065	ENSMLEG00000036551	RPUSD2	82	56.986	Mandrillus_leucophaeus
ENSDARG00000060992	rpusd2	92	60.757	ENSMAMG00000001077	rpusd2	94	60.241	Mastacembelus_armatus
ENSDARG00000060992	rpusd2	82	68.496	ENSMZEG00005006947	rpusd2	94	68.889	Maylandia_zebra
ENSDARG00000060992	rpusd2	81	59.875	ENSMGAG00000003058	RPUSD2	97	60.870	Meleagris_gallopavo
ENSDARG00000060992	rpusd2	80	59.408	ENSMAUG00000020467	Rpusd2	79	59.395	Mesocricetus_auratus
ENSDARG00000060992	rpusd2	81	58.607	ENSMICG00000028637	RPUSD2	81	58.369	Microcebus_murinus
ENSDARG00000060992	rpusd2	82	57.764	ENSMOCG00000020061	Rpusd2	79	58.643	Microtus_ochrogaster
ENSDARG00000060992	rpusd2	84	67.273	ENSMMOG00000012020	rpusd2	86	67.273	Mola_mola
ENSDARG00000060992	rpusd2	85	56.287	ENSMODG00000000300	RPUSD2	81	59.519	Monodelphis_domestica
ENSDARG00000060992	rpusd2	84	64.990	ENSMALG00000010024	rpusd2	86	64.990	Monopterus_albus
ENSDARG00000060992	rpusd2	82	57.764	MGP_CAROLIEiJ_G0024130	Rpusd2	78	58.478	Mus_caroli
ENSDARG00000060992	rpusd2	82	57.350	ENSMUSG00000027324	Rpusd2	78	57.725	Mus_musculus
ENSDARG00000060992	rpusd2	82	58.678	MGP_PahariEiJ_G0025573	Rpusd2	78	60.262	Mus_pahari
ENSDARG00000060992	rpusd2	82	57.231	MGP_SPRETEiJ_G0025046	Rpusd2	79	57.918	Mus_spretus
ENSDARG00000060992	rpusd2	86	55.620	ENSMPUG00000008517	RPUSD2	79	59.477	Mustela_putorius_furo
ENSDARG00000060992	rpusd2	80	58.861	ENSMLUG00000007971	RPUSD2	87	58.874	Myotis_lucifugus
ENSDARG00000060992	rpusd2	82	58.436	ENSNGAG00000014126	Rpusd2	80	59.825	Nannospalax_galili
ENSDARG00000060992	rpusd2	86	66.603	ENSNBRG00000010070	rpusd2	91	66.411	Neolamprologus_brichardi
ENSDARG00000060992	rpusd2	87	55.198	ENSNLEG00000035735	RPUSD2	92	54.702	Nomascus_leucogenys
ENSDARG00000060992	rpusd2	82	57.938	ENSMEUG00000008500	RPUSD2	84	59.737	Notamacropus_eugenii
ENSDARG00000060992	rpusd2	86	55.534	ENSOPRG00000014177	-	89	55.513	Ochotona_princeps
ENSDARG00000060992	rpusd2	82	58.178	ENSODEG00000017193	RPUSD2	82	59.300	Octodon_degus
ENSDARG00000060992	rpusd2	84	68.687	ENSONIG00000020102	rpusd2	95	68.081	Oreochromis_niloticus
ENSDARG00000060992	rpusd2	81	57.557	ENSOCUG00000015745	RPUSD2	82	55.179	Oryctolagus_cuniculus
ENSDARG00000060992	rpusd2	83	68.209	ENSORLG00000015516	rpusd2	87	68.209	Oryzias_latipes
ENSDARG00000060992	rpusd2	83	67.959	ENSORLG00020010533	rpusd2	86	67.755	Oryzias_latipes_hni
ENSDARG00000060992	rpusd2	83	67.480	ENSORLG00015009206	rpusd2	86	67.683	Oryzias_latipes_hsok
ENSDARG00000060992	rpusd2	82	69.467	ENSOMEG00000007355	rpusd2	77	69.467	Oryzias_melastigma
ENSDARG00000060992	rpusd2	80	57.203	ENSOGAG00000004867	RPUSD2	84	57.826	Otolemur_garnettii
ENSDARG00000060992	rpusd2	77	60.000	ENSOARG00000020235	RPUSD2	80	58.696	Ovis_aries
ENSDARG00000060992	rpusd2	81	58.178	ENSPPAG00000032874	RPUSD2	80	59.565	Pan_paniscus
ENSDARG00000060992	rpusd2	86	56.445	ENSPPRG00000010446	RPUSD2	80	59.957	Panthera_pardus
ENSDARG00000060992	rpusd2	86	56.445	ENSPTIG00000013316	RPUSD2	80	59.957	Panthera_tigris_altaica
ENSDARG00000060992	rpusd2	81	58.385	ENSPTRG00000006924	RPUSD2	80	59.783	Pan_troglodytes
ENSDARG00000060992	rpusd2	81	58.969	ENSPANG00000019339	RPUSD2	81	60.480	Papio_anubis
ENSDARG00000060992	rpusd2	91	62.521	ENSPKIG00000023017	rpusd2	71	73.445	Paramormyrops_kingsleyae
ENSDARG00000060992	rpusd2	61	59.780	ENSPSIG00000012680	RPUSD2	99	59.780	Pelodiscus_sinensis
ENSDARG00000060992	rpusd2	72	75.833	ENSPMGG00000018165	rpusd2	82	75.833	Periophthalmus_magnuspinnatus
ENSDARG00000060992	rpusd2	79	59.831	ENSPEMG00000012878	Rpusd2	81	58.606	Peromyscus_maniculatus_bairdii
ENSDARG00000060992	rpusd2	84	55.800	ENSPCIG00000023199	RPUSD2	80	58.734	Phascolarctos_cinereus
ENSDARG00000060992	rpusd2	86	68.226	ENSPFOG00000006829	rpusd2	88	67.251	Poecilia_formosa
ENSDARG00000060992	rpusd2	84	69.539	ENSPLAG00000022914	rpusd2	96	68.537	Poecilia_latipinna
ENSDARG00000060992	rpusd2	86	68.031	ENSPMEG00000009835	rpusd2	96	68.337	Poecilia_mexicana
ENSDARG00000060992	rpusd2	86	68.102	ENSPREG00000016441	rpusd2	85	67.123	Poecilia_reticulata
ENSDARG00000060992	rpusd2	85	55.642	ENSPPYG00000006355	RPUSD2	80	59.737	Pongo_abelii
ENSDARG00000060992	rpusd2	95	52.105	ENSPCOG00000028019	RPUSD2	100	50.880	Propithecus_coquereli
ENSDARG00000060992	rpusd2	85	55.556	ENSPVAG00000001837	RPUSD2	90	55.992	Pteropus_vampyrus
ENSDARG00000060992	rpusd2	83	69.028	ENSPNYG00000021507	rpusd2	94	68.750	Pundamilia_nyererei
ENSDARG00000060992	rpusd2	80	58.861	ENSRNOG00000046797	Rpusd2	78	59.389	Rattus_norvegicus
ENSDARG00000060992	rpusd2	80	58.861	ENSRNOG00000010528	LOC100911166	78	59.389	Rattus_norvegicus
ENSDARG00000060992	rpusd2	81	59.175	ENSRBIG00000030813	RPUSD2	81	60.699	Rhinopithecus_bieti
ENSDARG00000060992	rpusd2	81	58.969	ENSRROG00000026664	RPUSD2	81	60.480	Rhinopithecus_roxellana
ENSDARG00000060992	rpusd2	81	58.836	ENSSBOG00000035031	RPUSD2	81	59.737	Saimiri_boliviensis_boliviensis
ENSDARG00000060992	rpusd2	62	55.342	ENSSHAG00000015108	RPUSD2	91	54.424	Sarcophilus_harrisii
ENSDARG00000060992	rpusd2	87	57.570	ENSSFOG00015019057	rpusd2	85	57.570	Scleropages_formosus
ENSDARG00000060992	rpusd2	82	69.000	ENSSMAG00000000903	rpusd2	94	68.000	Scophthalmus_maximus
ENSDARG00000060992	rpusd2	82	66.078	ENSSDUG00000019139	rpusd2	86	65.067	Seriola_dumerili
ENSDARG00000060992	rpusd2	82	65.949	ENSSLDG00000005938	rpusd2	86	64.740	Seriola_lalandi_dorsalis
ENSDARG00000060992	rpusd2	80	58.491	ENSSARG00000002792	RPUSD2	81	59.695	Sorex_araneus
ENSDARG00000060992	rpusd2	79	58.228	ENSSPUG00000001206	RPUSD2	88	59.002	Sphenodon_punctatus
ENSDARG00000060992	rpusd2	84	67.387	ENSSPAG00000003578	rpusd2	87	66.601	Stegastes_partitus
ENSDARG00000060992	rpusd2	81	58.038	ENSSSCG00000036700	RPUSD2	79	59.251	Sus_scrofa
ENSDARG00000060992	rpusd2	85	65.830	ENSTRUG00000025880	rpusd2	97	65.830	Takifugu_rubripes
ENSDARG00000060992	rpusd2	83	67.748	ENSTNIG00000017329	rpusd2	96	67.748	Tetraodon_nigroviridis
ENSDARG00000060992	rpusd2	82	51.646	ENSTBEG00000007933	RPUSD2	80	52.070	Tupaia_belangeri
ENSDARG00000060992	rpusd2	81	58.351	ENSTTRG00000010585	RPUSD2	80	59.783	Tursiops_truncatus
ENSDARG00000060992	rpusd2	86	55.118	ENSUAMG00000001470	RPUSD2	86	58.515	Ursus_americanus
ENSDARG00000060992	rpusd2	86	55.118	ENSUMAG00000012487	RPUSD2	71	58.515	Ursus_maritimus
ENSDARG00000060992	rpusd2	82	57.992	ENSVPAG00000003844	RPUSD2	81	59.395	Vicugna_pacos
ENSDARG00000060992	rpusd2	82	56.996	ENSVVUG00000026590	RPUSD2	79	58.388	Vulpes_vulpes
ENSDARG00000060992	rpusd2	81	59.375	ENSXETG00000015973	rpusd2	95	59.692	Xenopus_tropicalis
ENSDARG00000060992	rpusd2	84	69.215	ENSXMAG00000021821	rpusd2	96	69.014	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001522	pseudouridine synthesis	-	IEA	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0009451	RNA modification	-	IEA	Process
GO:0009982	pseudouridine synthase activity	-	IEA	Function