EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000061040 (Gene tree)
Gene ID: 567494
Gene Symbol: pum2
Alias: si:ch1073-351m12.1
Full Name: pumilio RNA-binding family member 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 42318 bases
Position: chr20:6089507-6131824
Accession: ZDB-GENE-081031-76
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000139670	PUF	PF00806.19	5.3e-68	1	7
ENSDARP00000139670	PUF	PF00806.19	5.3e-68	2	7
ENSDARP00000139670	PUF	PF00806.19	5.3e-68	3	7
ENSDARP00000139670	PUF	PF00806.19	5.3e-68	4	7
ENSDARP00000139670	PUF	PF00806.19	5.3e-68	5	7
ENSDARP00000139670	PUF	PF00806.19	5.3e-68	6	7
ENSDARP00000139670	PUF	PF00806.19	5.3e-68	7	7
ENSDARP00000081013	PUF	PF00806.19	3.5e-63	1	6
ENSDARP00000081013	PUF	PF00806.19	3.5e-63	2	6
ENSDARP00000081013	PUF	PF00806.19	3.5e-63	3	6
ENSDARP00000081013	PUF	PF00806.19	3.5e-63	4	6
ENSDARP00000081013	PUF	PF00806.19	3.5e-63	5	6
ENSDARP00000081013	PUF	PF00806.19	3.5e-63	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000086578	-	3902	-	ENSDARP00000081013	1209 (aa)	-	F1R4Q6
ENSDART00000145964	-	1401	-	ENSDARP00000113580	422 (aa)	-	B8JLL6
ENSDART00000164090	-	3821	-	ENSDARP00000139670	1182 (aa)	-	A0A0R4IY44

Gene Model

Click here to download ENSDARG00000061040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000061040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000061040	pum2	94	64.342	ENSDARG00000099256	pum1	95	65.106

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000061040	pum2	79	91.304	ENSG00000055917	PUM2	100	76.471	Homo_sapiens
ENSDARG00000061040	pum2	90	97.317	ENSAPOG00000015756	pum2	100	76.735	Acanthochromis_polyacanthus
ENSDARG00000061040	pum2	90	74.977	ENSAMEG00000002823	PUM2	100	75.529	Ailuropoda_melanoleuca
ENSDARG00000061040	pum2	90	96.855	ENSACIG00000010646	pum2	96	96.881	Amphilophus_citrinellus
ENSDARG00000061040	pum2	99	84.796	ENSAOCG00000016619	pum2	99	85.520	Amphiprion_ocellaris
ENSDARG00000061040	pum2	100	87.091	ENSAPEG00000019924	pum2	100	87.762	Amphiprion_percula
ENSDARG00000061040	pum2	100	86.661	ENSATEG00000015030	pum2	100	87.248	Anabas_testudineus
ENSDARG00000061040	pum2	100	70.917	ENSAPLG00000010496	PUM2	100	72.190	Anas_platyrhynchos
ENSDARG00000061040	pum2	90	73.592	ENSACAG00000010491	PUM2	100	74.054	Anolis_carolinensis
ENSDARG00000061040	pum2	83	91.304	ENSANAG00000021807	PUM2	100	75.300	Aotus_nancymaae
ENSDARG00000061040	pum2	100	85.998	ENSACLG00000022532	pum2	100	86.661	Astatotilapia_calliptera
ENSDARG00000061040	pum2	90	74.517	ENSBTAG00000011155	PUM2	100	79.607	Bos_taurus
ENSDARG00000061040	pum2	83	91.304	ENSCJAG00000007450	PUM2	100	75.207	Callithrix_jacchus
ENSDARG00000061040	pum2	90	74.609	ENSCAFG00000003839	PUM2	100	75.161	Canis_familiaris
ENSDARG00000061040	pum2	90	74.630	ENSCAFG00020025689	PUM2	100	74.241	Canis_lupus_dingo
ENSDARG00000061040	pum2	90	74.609	ENSCHIG00000022180	PUM2	100	75.161	Capra_hircus
ENSDARG00000061040	pum2	90	75.069	ENSTSYG00000014463	PUM2	100	74.885	Carlito_syrichta
ENSDARG00000061040	pum2	89	86.774	ENSCAPG00000016888	PUM2	100	84.388	Cavia_aperea
ENSDARG00000061040	pum2	83	90.821	ENSCPOG00000031996	PUM2	100	75.115	Cavia_porcellus
ENSDARG00000061040	pum2	79	91.304	ENSCCAG00000037035	PUM2	100	75.300	Cebus_capucinus
ENSDARG00000061040	pum2	79	91.304	ENSCATG00000043826	PUM2	100	75.300	Cercocebus_atys
ENSDARG00000061040	pum2	90	78.420	ENSCLAG00000006048	PUM2	100	74.931	Chinchilla_lanigera
ENSDARG00000061040	pum2	90	75.392	ENSCSAG00000008087	PUM2	100	75.300	Chlorocebus_sabaeus
ENSDARG00000061040	pum2	65	90.747	ENSCHOG00000004575	PUM2	79	70.811	Choloepus_hoffmanni
ENSDARG00000061040	pum2	91	90.732	ENSCPBG00000019966	PUM2	99	90.580	Chrysemys_picta_bellii
ENSDARG00000061040	pum2	79	91.304	ENSCANG00000032797	PUM2	100	75.300	Colobus_angolensis_palliatus
ENSDARG00000061040	pum2	83	91.304	ENSCGRG00001025023	Pum2	100	75.207	Cricetulus_griseus_chok1gshd
ENSDARG00000061040	pum2	83	91.304	ENSCGRG00000001580	Pum2	100	75.392	Cricetulus_griseus_crigri
ENSDARG00000061040	pum2	100	85.415	ENSCSEG00000020899	pum2	100	86.421	Cynoglossus_semilaevis
ENSDARG00000061040	pum2	100	85.846	ENSCVAG00000002426	pum2	100	86.599	Cyprinodon_variegatus
ENSDARG00000061040	pum2	80	91.556	ENSDNOG00000006733	PUM2	100	72.802	Dasypus_novemcinctus
ENSDARG00000061040	pum2	90	70.876	ENSDORG00000011453	Pum2	100	71.324	Dipodomys_ordii
ENSDARG00000061040	pum2	78	91.459	ENSETEG00000017683	PUM2	79	91.459	Echinops_telfairi
ENSDARG00000061040	pum2	90	59.815	ENSEBUG00000004435	pum2	97	60.330	Eptatretus_burgeri
ENSDARG00000061040	pum2	63	59.281	ENSEBUG00000014828	pum2	96	58.513	Eptatretus_burgeri
ENSDARG00000061040	pum2	90	74.701	ENSEASG00005009429	PUM2	100	75.161	Equus_asinus_asinus
ENSDARG00000061040	pum2	90	74.701	ENSECAG00000021930	PUM2	100	79.607	Equus_caballus
ENSDARG00000061040	pum2	68	66.038	ENSEEUG00000003224	-	74	66.038	Erinaceus_europaeus
ENSDARG00000061040	pum2	100	84.487	ENSELUG00000014997	pum2	100	85.346	Esox_lucius
ENSDARG00000061040	pum2	90	74.631	ENSFCAG00000027520	PUM2	100	75.185	Felis_catus
ENSDARG00000061040	pum2	90	73.777	ENSFALG00000001759	PUM2	100	75.185	Ficedula_albicollis
ENSDARG00000061040	pum2	89	83.090	ENSFDAG00000019685	PUM2	100	74.449	Fukomys_damarensis
ENSDARG00000061040	pum2	90	97.317	ENSFHEG00000021596	pum2	100	84.710	Fundulus_heteroclitus
ENSDARG00000061040	pum2	90	83.179	ENSGMOG00000006903	pum2	100	83.272	Gadus_morhua
ENSDARG00000061040	pum2	79	90.976	ENSGALG00000016481	PUM2	92	90.821	Gallus_gallus
ENSDARG00000061040	pum2	100	86.169	ENSGAFG00000013691	pum2	100	87.008	Gambusia_affinis
ENSDARG00000061040	pum2	90	85.595	ENSGACG00000009670	pum2	100	85.887	Gasterosteus_aculeatus
ENSDARG00000061040	pum2	100	71.276	ENSGAGG00000020698	PUM2	100	75.046	Gopherus_agassizii
ENSDARG00000061040	pum2	79	91.304	ENSGGOG00000011374	PUM2	100	75.207	Gorilla_gorilla
ENSDARG00000061040	pum2	100	97.518	ENSHBUG00000016453	pum2	100	94.093	Haplochromis_burtoni
ENSDARG00000061040	pum2	90	73.641	ENSHGLG00000007892	PUM2	100	73.805	Heterocephalus_glaber_female
ENSDARG00000061040	pum2	90	73.665	ENSHGLG00100015510	PUM2	100	73.829	Heterocephalus_glaber_male
ENSDARG00000061040	pum2	100	85.427	ENSHCOG00000010119	pum2	100	86.181	Hippocampus_comes
ENSDARG00000061040	pum2	90	74.977	ENSSTOG00000006262	PUM2	100	75.184	Ictidomys_tridecemlineatus
ENSDARG00000061040	pum2	90	75.115	ENSJJAG00000020969	Pum2	100	75.023	Jaculus_jaculus
ENSDARG00000061040	pum2	100	85.678	ENSKMAG00000017216	pum2	100	86.421	Kryptolebias_marmoratus
ENSDARG00000061040	pum2	100	86.074	ENSLBEG00000020488	pum2	100	86.829	Labrus_bergylta
ENSDARG00000061040	pum2	100	72.313	ENSLACG00000008723	PUM2	100	73.835	Latimeria_chalumnae
ENSDARG00000061040	pum2	100	75.103	ENSLOCG00000017196	pum2	100	76.092	Lepisosteus_oculatus
ENSDARG00000061040	pum2	90	74.586	ENSLAFG00000009278	PUM2	100	75.046	Loxodonta_africana
ENSDARG00000061040	pum2	79	91.304	ENSMFAG00000000492	PUM2	100	75.300	Macaca_fascicularis
ENSDARG00000061040	pum2	83	91.304	ENSMMUG00000023181	PUM2	100	75.300	Macaca_mulatta
ENSDARG00000061040	pum2	83	91.304	ENSMNEG00000039659	PUM2	100	75.300	Macaca_nemestrina
ENSDARG00000061040	pum2	79	91.304	ENSMLEG00000039243	PUM2	100	75.300	Mandrillus_leucophaeus
ENSDARG00000061040	pum2	100	86.840	ENSMAMG00000006121	pum2	100	87.427	Mastacembelus_armatus
ENSDARG00000061040	pum2	100	85.833	ENSMZEG00005000791	pum2	100	86.495	Maylandia_zebra
ENSDARG00000061040	pum2	90	73.475	ENSMGAG00000014040	PUM2	100	74.885	Meleagris_gallopavo
ENSDARG00000061040	pum2	90	75.668	ENSMAUG00000000311	Pum2	100	75.576	Mesocricetus_auratus
ENSDARG00000061040	pum2	90	75.276	ENSMICG00000011647	PUM2	100	75.184	Microcebus_murinus
ENSDARG00000061040	pum2	90	75.138	ENSMOCG00000013663	Pum2	100	75.345	Microtus_ochrogaster
ENSDARG00000061040	pum2	90	86.111	ENSMMOG00000002975	pum2	100	86.667	Mola_mola
ENSDARG00000061040	pum2	90	73.781	ENSMODG00000009811	PUM2	100	73.229	Monodelphis_domestica
ENSDARG00000061040	pum2	90	97.073	ENSMALG00000022313	pum2	100	75.514	Monopterus_albus
ENSDARG00000061040	pum2	90	74.793	MGP_CAROLIEiJ_G0017603	Pum2	100	75.940	Mus_caroli
ENSDARG00000061040	pum2	90	74.793	ENSMUSG00000020594	Pum2	100	75.092	Mus_musculus
ENSDARG00000061040	pum2	83	91.304	MGP_PahariEiJ_G0029361	Pum2	100	75.940	Mus_pahari
ENSDARG00000061040	pum2	90	74.701	MGP_SPRETEiJ_G0018447	Pum2	100	75.564	Mus_spretus
ENSDARG00000061040	pum2	90	74.793	ENSMPUG00000013734	PUM2	100	75.345	Mustela_putorius_furo
ENSDARG00000061040	pum2	90	74.770	ENSMLUG00000007362	PUM2	100	75.322	Myotis_lucifugus
ENSDARG00000061040	pum2	90	74.770	ENSNGAG00000016665	-	100	74.701	Nannospalax_galili
ENSDARG00000061040	pum2	90	53.585	ENSNGAG00000016239	-	99	53.260	Nannospalax_galili
ENSDARG00000061040	pum2	82	91.288	ENSNBRG00000020737	pum2	100	67.685	Neolamprologus_brichardi
ENSDARG00000061040	pum2	79	91.304	ENSNLEG00000002509	PUM2	100	75.207	Nomascus_leucogenys
ENSDARG00000061040	pum2	84	71.938	ENSMEUG00000016567	PUM2	100	66.329	Notamacropus_eugenii
ENSDARG00000061040	pum2	68	67.253	ENSOPRG00000001963	PUM2	93	61.931	Ochotona_princeps
ENSDARG00000061040	pum2	90	78.988	ENSODEG00000007823	PUM2	100	74.540	Octodon_degus
ENSDARG00000061040	pum2	100	87.186	ENSONIG00000006119	pum2	100	87.772	Oreochromis_niloticus
ENSDARG00000061040	pum2	90	74.839	ENSOCUG00000017908	PUM2	100	75.390	Oryctolagus_cuniculus
ENSDARG00000061040	pum2	100	85.139	ENSORLG00000012611	pum2	100	85.558	Oryzias_latipes
ENSDARG00000061040	pum2	100	85.306	ENSORLG00020014452	pum2	100	85.726	Oryzias_latipes_hni
ENSDARG00000061040	pum2	100	85.474	ENSORLG00015009427	pum2	100	85.894	Oryzias_latipes_hsok
ENSDARG00000061040	pum2	85	91.537	ENSOMEG00000005889	pum2	100	76.139	Oryzias_melastigma
ENSDARG00000061040	pum2	90	74.472	ENSOARG00000017236	PUM2	100	75.023	Ovis_aries
ENSDARG00000061040	pum2	79	91.304	ENSPPAG00000023095	PUM2	100	75.207	Pan_paniscus
ENSDARG00000061040	pum2	90	74.631	ENSPPRG00000021443	PUM2	100	75.681	Panthera_pardus
ENSDARG00000061040	pum2	90	74.631	ENSPTIG00000018982	PUM2	100	75.185	Panthera_tigris_altaica
ENSDARG00000061040	pum2	79	91.304	ENSPTRG00000011692	PUM2	100	75.207	Pan_troglodytes
ENSDARG00000061040	pum2	90	65.451	ENSPANG00000009393	PUM2	100	87.324	Papio_anubis
ENSDARG00000061040	pum2	90	77.376	ENSPKIG00000023195	pum2	100	82.410	Paramormyrops_kingsleyae
ENSDARG00000061040	pum2	100	71.605	ENSPSIG00000011626	PUM2	99	72.944	Pelodiscus_sinensis
ENSDARG00000061040	pum2	90	75.000	ENSPEMG00000008357	Pum2	100	74.908	Peromyscus_maniculatus_bairdii
ENSDARG00000061040	pum2	90	62.805	ENSPMAG00000007038	pum2	100	60.960	Petromyzon_marinus
ENSDARG00000061040	pum2	90	72.452	ENSPCIG00000022139	PUM2	100	72.360	Phascolarctos_cinereus
ENSDARG00000061040	pum2	100	84.634	ENSPFOG00000019208	pum2	100	85.456	Poecilia_formosa
ENSDARG00000061040	pum2	100	86.337	ENSPLAG00000001826	pum2	100	87.175	Poecilia_latipinna
ENSDARG00000061040	pum2	100	86.337	ENSPMEG00000015766	pum2	100	88.530	Poecilia_mexicana
ENSDARG00000061040	pum2	90	75.484	ENSPPYG00000012617	PUM2	100	75.392	Pongo_abelii
ENSDARG00000061040	pum2	63	89.130	ENSPCAG00000008001	PUM2	70	89.130	Procavia_capensis
ENSDARG00000061040	pum2	89	75.419	ENSPCOG00000019636	PUM2	100	75.326	Propithecus_coquereli
ENSDARG00000061040	pum2	88	70.009	ENSPVAG00000002920	PUM2	100	70.467	Pteropus_vampyrus
ENSDARG00000061040	pum2	100	90.909	ENSPNYG00000022901	pum2	100	86.578	Pundamilia_nyererei
ENSDARG00000061040	pum2	98	89.102	ENSPNAG00000008025	pum2	99	89.102	Pygocentrus_nattereri
ENSDARG00000061040	pum2	90	74.288	ENSRNOG00000006180	Pum2	100	74.288	Rattus_norvegicus
ENSDARG00000061040	pum2	83	91.304	ENSRBIG00000044880	PUM2	100	75.802	Rhinopithecus_bieti
ENSDARG00000061040	pum2	79	91.304	ENSSBOG00000022007	PUM2	100	75.392	Saimiri_boliviensis_boliviensis
ENSDARG00000061040	pum2	90	71.559	ENSSHAG00000002778	PUM2	100	71.156	Sarcophilus_harrisii
ENSDARG00000061040	pum2	91	77.443	ENSSFOG00015003476	pum2	100	77.687	Scleropages_formosus
ENSDARG00000061040	pum2	100	85.163	ENSSMAG00000018236	pum2	100	86.253	Scophthalmus_maximus
ENSDARG00000061040	pum2	92	88.542	ENSSDUG00000001800	pum2	100	89.583	Seriola_dumerili
ENSDARG00000061040	pum2	100	87.008	ENSSLDG00000000981	pum2	100	88.097	Seriola_lalandi_dorsalis
ENSDARG00000061040	pum2	86	65.363	ENSSARG00000010992	PUM2	86	66.816	Sorex_araneus
ENSDARG00000061040	pum2	89	73.787	ENSSPUG00000017012	PUM2	99	74.651	Sphenodon_punctatus
ENSDARG00000061040	pum2	90	97.317	ENSSPAG00000022948	pum2	100	87.846	Stegastes_partitus
ENSDARG00000061040	pum2	90	74.149	ENSSSCG00000008600	PUM2	100	79.003	Sus_scrofa
ENSDARG00000061040	pum2	90	73.684	ENSTGUG00000013149	PUM2	100	75.092	Taeniopygia_guttata
ENSDARG00000061040	pum2	100	82.521	ENSTRUG00000018167	pum2	100	82.957	Takifugu_rubripes
ENSDARG00000061040	pum2	100	84.307	ENSTNIG00000003116	pum2	100	85.142	Tetraodon_nigroviridis
ENSDARG00000061040	pum2	69	86.653	ENSTBEG00000008729	PUM2	85	86.066	Tupaia_belangeri
ENSDARG00000061040	pum2	90	74.354	ENSTTRG00000004887	PUM2	100	74.908	Tursiops_truncatus
ENSDARG00000061040	pum2	64	80.903	ENSUAMG00000008120	PUM2	97	80.645	Ursus_americanus
ENSDARG00000061040	pum2	90	74.793	ENSUMAG00000023198	PUM2	100	75.345	Ursus_maritimus
ENSDARG00000061040	pum2	90	74.770	ENSVPAG00000005056	PUM2	100	75.322	Vicugna_pacos
ENSDARG00000061040	pum2	90	74.701	ENSVVUG00000014829	PUM2	100	75.253	Vulpes_vulpes
ENSDARG00000061040	pum2	100	68.395	ENSXETG00000008903	pum2	100	67.406	Xenopus_tropicalis
ENSDARG00000061040	pum2	94	87.278	ENSXCOG00000002556	pum2	100	88.321	Xiphophorus_couchianus
ENSDARG00000061040	pum2	100	86.169	ENSXMAG00000017682	pum2	100	87.008	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function