EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000061091 (Gene tree)
Gene ID: 563225
Gene Symbol: gtpbp6
Alias: fc56b07|wu:fc56b07|wu:fl82e09
Full Name: GTP binding protein 6 (putative)
Gene Type: protein_coding
Species: Danio_rerio
Status: confidence
Strand: Plus strand
Length: 13122 bases
Position: chr6:37441789-37454910
Accession: ZDB-GENE-031118-62
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000128458	MMR_HSR1	PF01926.23	5.9e-13	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
28381614	Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition	preZGA & embryo	2017 Apr 5	Despic V	DOI: 10.1101/gr.215954.116
28381614	Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition	ZGA & embryo	2017 Apr 5	Despic V	DOI: 10.1101/gr.215954.116

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000157317	-	1991	XM_009302524	ENSDARP00000128458	543 (aa)	XP_009300799	X1WE07

Gene Model

Click here to download ENSDARG00000061091's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000061091's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000061091	gtpbp6	79	62.877	ENSG00000178605	GTPBP6	96	57.831	Homo_sapiens
ENSDARG00000061091	gtpbp6	81	75.626	ENSAPOG00000001396	gtpbp6	95	68.811	Acanthochromis_polyacanthus
ENSDARG00000061091	gtpbp6	77	60.238	ENSAMEG00000001958	GTPBP6	95	58.186	Ailuropoda_melanoleuca
ENSDARG00000061091	gtpbp6	82	71.588	ENSACIG00000001694	gtpbp6	90	68.607	Amphilophus_citrinellus
ENSDARG00000061091	gtpbp6	81	75.909	ENSAOCG00000014817	gtpbp6	90	72.050	Amphiprion_ocellaris
ENSDARG00000061091	gtpbp6	81	76.136	ENSAPEG00000017894	gtpbp6	90	72.257	Amphiprion_percula
ENSDARG00000061091	gtpbp6	81	77.221	ENSATEG00000012768	gtpbp6	84	76.562	Anabas_testudineus
ENSDARG00000061091	gtpbp6	75	66.585	ENSAPLG00000005592	GTPBP6	99	66.585	Anas_platyrhynchos
ENSDARG00000061091	gtpbp6	80	68.276	ENSACAG00000011834	GTPBP6	89	65.310	Anolis_carolinensis
ENSDARG00000061091	gtpbp6	94	69.202	ENSACLG00000002216	gtpbp6	97	69.202	Astatotilapia_calliptera
ENSDARG00000061091	gtpbp6	98	72.826	ENSAMXG00000012493	gtpbp6	97	80.249	Astyanax_mexicanus
ENSDARG00000061091	gtpbp6	79	58.701	ENSBTAG00000054315	GTPBP6	91	54.367	Bos_taurus
ENSDARG00000061091	gtpbp6	65	62.429	ENSCJAG00000013056	GTPBP6	100	62.429	Callithrix_jacchus
ENSDARG00000061091	gtpbp6	77	60.714	ENSCAFG00000010931	GTPBP6	86	57.930	Canis_familiaris
ENSDARG00000061091	gtpbp6	77	60.476	ENSCAFG00020001279	-	86	57.709	Canis_lupus_dingo
ENSDARG00000061091	gtpbp6	77	60.714	ENSCAFG00020010766	-	86	57.930	Canis_lupus_dingo
ENSDARG00000061091	gtpbp6	79	58.933	ENSCHIG00000000121	GTPBP6	89	56.466	Capra_hircus
ENSDARG00000061091	gtpbp6	79	60.557	ENSCCAG00000032874	GTPBP6	97	54.739	Cebus_capucinus
ENSDARG00000061091	gtpbp6	79	61.949	ENSCATG00000024945	GTPBP6	90	59.615	Cercocebus_atys
ENSDARG00000061091	gtpbp6	51	63.669	ENSCLAG00000000054	-	87	66.409	Chinchilla_lanigera
ENSDARG00000061091	gtpbp6	77	68.333	ENSCPBG00000007520	GTPBP6	85	66.368	Chrysemys_picta_bellii
ENSDARG00000061091	gtpbp6	82	39.254	ENSCING00000012867	-	86	39.254	Ciona_intestinalis
ENSDARG00000061091	gtpbp6	66	40.050	ENSCSAVG00000009232	-	91	40.050	Ciona_savignyi
ENSDARG00000061091	gtpbp6	78	58.216	ENSCGRG00001022411	Gtpbp6	97	52.590	Cricetulus_griseus_chok1gshd
ENSDARG00000061091	gtpbp6	76	58.596	ENSCGRG00000007715	Gtpbp6	95	58.596	Cricetulus_griseus_crigri
ENSDARG00000061091	gtpbp6	83	68.433	ENSCSEG00000007271	gtpbp6	89	68.433	Cynoglossus_semilaevis
ENSDARG00000061091	gtpbp6	88	71.933	ENSCVAG00000015417	gtpbp6	94	71.933	Cyprinodon_variegatus
ENSDARG00000061091	gtpbp6	61	51.057	ENSDNOG00000039508	GTPBP6	82	48.219	Dasypus_novemcinctus
ENSDARG00000061091	gtpbp6	77	39.041	FBgn0039339	CG5116	81	38.375	Drosophila_melanogaster
ENSDARG00000061091	gtpbp6	85	48.696	ENSEBUG00000000404	gtpbp6	82	48.696	Eptatretus_burgeri
ENSDARG00000061091	gtpbp6	72	61.282	ENSEASG00005007092	-	53	58.294	Equus_asinus_asinus
ENSDARG00000061091	gtpbp6	79	60.047	ENSECAG00000032734	GTPBP6	87	57.298	Equus_caballus
ENSDARG00000061091	gtpbp6	84	75.000	ENSELUG00000016376	gtpbp6	84	74.840	Esox_lucius
ENSDARG00000061091	gtpbp6	77	54.502	ENSFCAG00000013263	-	88	51.836	Felis_catus
ENSDARG00000061091	gtpbp6	78	54.717	ENSFCAG00000010310	-	93	56.652	Felis_catus
ENSDARG00000061091	gtpbp6	80	63.594	ENSFALG00000004133	GTPBP6	93	63.063	Ficedula_albicollis
ENSDARG00000061091	gtpbp6	87	72.917	ENSFHEG00000012018	gtpbp6	92	72.917	Fundulus_heteroclitus
ENSDARG00000061091	gtpbp6	73	75.750	ENSGMOG00000004778	gtpbp6	99	75.750	Gadus_morhua
ENSDARG00000061091	gtpbp6	74	66.000	ENSGALG00000016717	GTPBP6	99	66.000	Gallus_gallus
ENSDARG00000061091	gtpbp6	80	75.115	ENSGAFG00000018158	gtpbp6	84	71.102	Gambusia_affinis
ENSDARG00000061091	gtpbp6	74	73.333	ENSGACG00000013857	gtpbp6	99	73.333	Gasterosteus_aculeatus
ENSDARG00000061091	gtpbp6	77	68.660	ENSGAGG00000021606	GTPBP6	84	66.136	Gopherus_agassizii
ENSDARG00000061091	gtpbp6	53	65.157	ENSGGOG00000002792	-	100	65.157	Gorilla_gorilla
ENSDARG00000061091	gtpbp6	94	69.392	ENSHBUG00000013113	gtpbp6	97	69.392	Haplochromis_burtoni
ENSDARG00000061091	gtpbp6	79	56.410	ENSHGLG00000000207	GTPBP6	87	55.211	Heterocephalus_glaber_female
ENSDARG00000061091	gtpbp6	66	56.863	ENSHGLG00100000320	GTPBP6	99	56.863	Heterocephalus_glaber_male
ENSDARG00000061091	gtpbp6	80	55.862	ENSHCOG00000012544	gtpbp6	91	70.877	Hippocampus_comes
ENSDARG00000061091	gtpbp6	80	82.529	ENSIPUG00000022531	gtpbp6	99	70.236	Ictalurus_punctatus
ENSDARG00000061091	gtpbp6	81	73.982	ENSKMAG00000016464	gtpbp6	87	72.807	Kryptolebias_marmoratus
ENSDARG00000061091	gtpbp6	81	74.886	ENSLBEG00000024203	gtpbp6	87	73.026	Labrus_bergylta
ENSDARG00000061091	gtpbp6	81	72.109	ENSLACG00000012754	GTPBP6	81	71.652	Latimeria_chalumnae
ENSDARG00000061091	gtpbp6	87	70.894	ENSLOCG00000008009	gtpbp6	100	70.894	Lepisosteus_oculatus
ENSDARG00000061091	gtpbp6	88	56.426	ENSMFAG00000041568	GTPBP6	96	56.426	Macaca_fascicularis
ENSDARG00000061091	gtpbp6	79	52.436	ENSMNEG00000039609	GTPBP6	95	48.193	Macaca_nemestrina
ENSDARG00000061091	gtpbp6	81	76.538	ENSMAMG00000012631	gtpbp6	85	75.893	Mastacembelus_armatus
ENSDARG00000061091	gtpbp6	94	69.011	ENSMZEG00005002869	gtpbp6	97	69.011	Maylandia_zebra
ENSDARG00000061091	gtpbp6	71	64.416	ENSMGAG00000014752	GTPBP6	95	64.416	Meleagris_gallopavo
ENSDARG00000061091	gtpbp6	86	69.263	ENSMMOG00000005950	gtpbp6	91	69.263	Mola_mola
ENSDARG00000061091	gtpbp6	77	67.857	ENSMODG00000000326	GTPBP6	97	63.774	Monodelphis_domestica
ENSDARG00000061091	gtpbp6	81	74.715	ENSMALG00000014993	gtpbp6	84	74.107	Monopterus_albus
ENSDARG00000061091	gtpbp6	78	52.844	MGP_CAROLIEiJ_G0027536	Gtpbp6	94	48.963	Mus_caroli
ENSDARG00000061091	gtpbp6	78	54.265	ENSMUSG00000033434	Gtpbp6	98	48.467	Mus_musculus
ENSDARG00000061091	gtpbp6	78	54.028	MGP_SPRETEiJ_G0028534	Gtpbp6	98	48.276	Mus_spretus
ENSDARG00000061091	gtpbp6	78	58.294	ENSMPUG00000001536	GTPBP6	88	58.294	Mustela_putorius_furo
ENSDARG00000061091	gtpbp6	77	60.000	ENSNGAG00000011609	Gtpbp6	87	57.965	Nannospalax_galili
ENSDARG00000061091	gtpbp6	94	69.772	ENSNBRG00000017629	gtpbp6	97	69.772	Neolamprologus_brichardi
ENSDARG00000061091	gtpbp6	52	69.751	ENSMEUG00000001355	-	83	65.287	Notamacropus_eugenii
ENSDARG00000061091	gtpbp6	76	56.386	ENSODEG00000001052	GTPBP6	95	51.959	Octodon_degus
ENSDARG00000061091	gtpbp6	87	73.486	ENSONIG00000007330	gtpbp6	91	73.486	Oreochromis_niloticus
ENSDARG00000061091	gtpbp6	78	52.448	ENSOANG00000007007	-	93	52.448	Ornithorhynchus_anatinus
ENSDARG00000061091	gtpbp6	79	57.809	ENSOCUG00000008245	GTPBP6	87	55.921	Oryctolagus_cuniculus
ENSDARG00000061091	gtpbp6	86	73.150	ENSORLG00000016077	gtpbp6	90	73.150	Oryzias_latipes
ENSDARG00000061091	gtpbp6	82	75.561	ENSORLG00020018687	gtpbp6	85	75.561	Oryzias_latipes_hni
ENSDARG00000061091	gtpbp6	82	75.112	ENSORLG00015014255	gtpbp6	85	75.112	Oryzias_latipes_hsok
ENSDARG00000061091	gtpbp6	82	75.561	ENSOMEG00000004496	gtpbp6	85	75.561	Oryzias_melastigma
ENSDARG00000061091	gtpbp6	79	61.163	ENSOGAG00000011327	GTPBP6	99	59.821	Otolemur_garnettii
ENSDARG00000061091	gtpbp6	74	57.213	ENSOARG00000000946	GTPBP6	99	57.213	Ovis_aries
ENSDARG00000061091	gtpbp6	66	64.444	ENSPPAG00000028400	-	79	64.444	Pan_paniscus
ENSDARG00000061091	gtpbp6	77	53.066	ENSPPRG00000004932	-	97	48.207	Panthera_pardus
ENSDARG00000061091	gtpbp6	78	47.430	ENSPPRG00000006710	-	89	45.474	Panthera_pardus
ENSDARG00000061091	gtpbp6	79	63.109	ENSPTRG00000050696	GTPBP6	96	58.032	Pan_troglodytes
ENSDARG00000061091	gtpbp6	79	58.701	ENSPANG00000011580	GTPBP6	87	57.582	Papio_anubis
ENSDARG00000061091	gtpbp6	83	72.727	ENSPKIG00000022514	gtpbp6	81	72.727	Paramormyrops_kingsleyae
ENSDARG00000061091	gtpbp6	74	68.828	ENSPSIG00000013117	GTPBP6	99	68.828	Pelodiscus_sinensis
ENSDARG00000061091	gtpbp6	73	54.135	ENSPMAG00000006496	gtpbp6	99	54.135	Petromyzon_marinus
ENSDARG00000061091	gtpbp6	77	68.974	ENSPCIG00000016456	GTPBP6	87	66.075	Phascolarctos_cinereus
ENSDARG00000061091	gtpbp6	80	75.576	ENSPFOG00000015695	gtpbp6	99	76.515	Poecilia_formosa
ENSDARG00000061091	gtpbp6	80	76.037	ENSPLAG00000015495	gtpbp6	99	68.472	Poecilia_latipinna
ENSDARG00000061091	gtpbp6	80	76.728	ENSPMEG00000000859	gtpbp6	93	72.050	Poecilia_mexicana
ENSDARG00000061091	gtpbp6	80	76.498	ENSPREG00000017643	gtpbp6	99	68.726	Poecilia_reticulata
ENSDARG00000061091	gtpbp6	51	65.818	ENSPPYG00000020075	-	100	65.818	Pongo_abelii
ENSDARG00000061091	gtpbp6	92	70.254	ENSPNYG00000000521	gtpbp6	92	70.254	Pundamilia_nyererei
ENSDARG00000061091	gtpbp6	87	80.544	ENSPNAG00000002094	gtpbp6	87	80.544	Pygocentrus_nattereri
ENSDARG00000061091	gtpbp6	79	52.914	ENSRNOG00000037426	Gtpbp6	92	50.636	Rattus_norvegicus
ENSDARG00000061091	gtpbp6	79	52.914	ENSRNOG00000048168	Gtpbp6	92	50.636	Rattus_norvegicus
ENSDARG00000061091	gtpbp6	79	62.413	ENSRBIG00000027538	GTPBP6	87	61.099	Rhinopithecus_bieti
ENSDARG00000061091	gtpbp6	79	62.181	ENSRROG00000033503	GTPBP6	87	60.879	Rhinopithecus_roxellana
ENSDARG00000061091	gtpbp6	77	69.431	ENSSHAG00000015570	GTPBP6	86	67.333	Sarcophilus_harrisii
ENSDARG00000061091	gtpbp6	82	75.561	ENSSFOG00015004098	gtpbp6	79	75.561	Scleropages_formosus
ENSDARG00000061091	gtpbp6	81	74.603	ENSSMAG00000019520	gtpbp6	92	69.512	Scophthalmus_maximus
ENSDARG00000061091	gtpbp6	87	70.165	ENSSDUG00000002202	gtpbp6	90	70.988	Seriola_dumerili
ENSDARG00000061091	gtpbp6	86	71.250	ENSSLDG00000023633	gtpbp6	99	71.250	Seriola_lalandi_dorsalis
ENSDARG00000061091	gtpbp6	79	66.822	ENSSPUG00000005537	GTPBP6	88	63.834	Sphenodon_punctatus
ENSDARG00000061091	gtpbp6	53	74.476	ENSSPAG00000017331	gtpbp6	95	74.476	Stegastes_partitus
ENSDARG00000061091	gtpbp6	80	76.430	ENSSPAG00000017406	gtpbp6	84	74.945	Stegastes_partitus
ENSDARG00000061091	gtpbp6	79	60.606	ENSSSCG00000033858	-	86	59.292	Sus_scrofa
ENSDARG00000061091	gtpbp6	79	60.606	ENSSSCG00000037491	-	86	59.292	Sus_scrofa
ENSDARG00000061091	gtpbp6	82	62.754	ENSTGUG00000010642	-	98	62.754	Taeniopygia_guttata
ENSDARG00000061091	gtpbp6	82	76.126	ENSTRUG00000011175	gtpbp6	88	75.276	Takifugu_rubripes
ENSDARG00000061091	gtpbp6	81	72.235	ENSTNIG00000010659	gtpbp6	99	73.412	Tetraodon_nigroviridis
ENSDARG00000061091	gtpbp6	74	61.443	ENSUMAG00000018848	GTPBP6	99	61.443	Ursus_maritimus
ENSDARG00000061091	gtpbp6	70	60.105	ENSVVUG00000008199	GTPBP6	71	57.108	Vulpes_vulpes
ENSDARG00000061091	gtpbp6	77	66.905	ENSXETG00000004125	gtpbp6	85	63.938	Xenopus_tropicalis
ENSDARG00000061091	gtpbp6	54	82.653	ENSXCOG00000006281	gtpbp6	69	75.953	Xiphophorus_couchianus
ENSDARG00000061091	gtpbp6	80	76.037	ENSXMAG00000015980	gtpbp6	93	71.933	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005525	GTP binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0043022	ribosome binding	21873635.	IBA	Function