EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000061124 (Gene tree)
Gene ID: 569063
Gene Symbol: srpra
Alias: id:ibd1064|srpr|wu:fd12f02
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 21683 bases
Position: chr18:44826173-44847855
Accession: ZDB-GENE-030219-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000081257	SRP54	PF00448.22	7.2e-48	1	1
ENSDARP00000081257	SRP54_N	PF02881.19	1.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000086823	-	3061	XM_692426	ENSDARP00000081257	650 (aa)	XP_697518	E7EZW6

Gene Model

Click here to download ENSDARG00000061124's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000061124's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000061124	srpra	100	66.616	ENSG00000182934	SRPRA	100	67.071	Homo_sapiens
ENSDARG00000061124	srpra	100	79.237	ENSAPOG00000017588	srpra	100	79.237	Acanthochromis_polyacanthus
ENSDARG00000061124	srpra	100	66.616	ENSAMEG00000000117	SRPRA	100	66.463	Ailuropoda_melanoleuca
ENSDARG00000061124	srpra	100	77.454	ENSACIG00000021588	srpra	100	77.454	Amphilophus_citrinellus
ENSDARG00000061124	srpra	100	79.389	ENSAOCG00000018884	srpra	100	79.389	Amphiprion_ocellaris
ENSDARG00000061124	srpra	100	79.389	ENSAPEG00000022286	srpra	100	74.923	Amphiprion_percula
ENSDARG00000061124	srpra	100	77.863	ENSATEG00000023578	srpra	94	91.463	Anabas_testudineus
ENSDARG00000061124	srpra	94	67.863	ENSAPLG00000016079	SRPRA	99	66.613	Anas_platyrhynchos
ENSDARG00000061124	srpra	100	68.237	ENSACAG00000000108	SRPRA	100	67.519	Anolis_carolinensis
ENSDARG00000061124	srpra	100	66.313	ENSANAG00000020346	SRPRA	100	66.768	Aotus_nancymaae
ENSDARG00000061124	srpra	100	78.387	ENSACLG00000000518	srpra	100	79.542	Astatotilapia_calliptera
ENSDARG00000061124	srpra	100	74.501	ENSAMXG00000009975	srpra	100	74.501	Astyanax_mexicanus
ENSDARG00000061124	srpra	100	65.361	ENSBTAG00000014105	SRPRA	100	66.465	Bos_taurus
ENSDARG00000061124	srpra	99	49.014	WBGene00009521	F38A1.8	99	48.862	Caenorhabditis_elegans
ENSDARG00000061124	srpra	100	66.413	ENSCJAG00000008752	SRPRA	100	66.869	Callithrix_jacchus
ENSDARG00000061124	srpra	100	64.733	ENSCAFG00000010474	SRPRA	100	64.733	Canis_familiaris
ENSDARG00000061124	srpra	100	66.313	ENSCAFG00020010608	SRPRA	100	66.412	Canis_lupus_dingo
ENSDARG00000061124	srpra	100	67.018	ENSCHIG00000012423	SRPRA	100	66.465	Capra_hircus
ENSDARG00000061124	srpra	80	79.501	ENSTSYG00000005187	SRPRA	96	84.084	Carlito_syrichta
ENSDARG00000061124	srpra	95	63.768	ENSCAPG00000007098	SRPRA	91	89.474	Cavia_aperea
ENSDARG00000061124	srpra	100	66.717	ENSCPOG00000014976	SRPRA	91	89.474	Cavia_porcellus
ENSDARG00000061124	srpra	100	66.313	ENSCCAG00000025602	SRPRA	100	65.961	Cebus_capucinus
ENSDARG00000061124	srpra	100	67.021	ENSCATG00000039354	SRPRA	100	67.375	Cercocebus_atys
ENSDARG00000061124	srpra	100	66.717	ENSCLAG00000016839	SRPRA	100	67.173	Chinchilla_lanigera
ENSDARG00000061124	srpra	100	66.920	ENSCSAG00000002271	SRPRA	100	67.375	Chlorocebus_sabaeus
ENSDARG00000061124	srpra	53	86.224	ENSCHOG00000010015	-	73	86.224	Choloepus_hoffmanni
ENSDARG00000061124	srpra	100	68.237	ENSCPBG00000011128	SRPRA	100	67.776	Chrysemys_picta_bellii
ENSDARG00000061124	srpra	99	58.499	ENSCING00000008954	-	100	58.752	Ciona_intestinalis
ENSDARG00000061124	srpra	99	58.610	ENSCSAVG00000005602	-	100	58.725	Ciona_savignyi
ENSDARG00000061124	srpra	100	66.869	ENSCANG00000032337	SRPRA	100	67.223	Colobus_angolensis_palliatus
ENSDARG00000061124	srpra	100	67.173	ENSCGRG00001017670	Srpr	100	67.424	Cricetulus_griseus_chok1gshd
ENSDARG00000061124	srpra	100	67.173	ENSCGRG00000009892	Srpr	90	90.370	Cricetulus_griseus_crigri
ENSDARG00000061124	srpra	100	78.116	ENSCSEG00000002374	srpra	100	79.027	Cynoglossus_semilaevis
ENSDARG00000061124	srpra	100	75.495	ENSCVAG00000019881	srpra	100	76.408	Cyprinodon_variegatus
ENSDARG00000061124	srpra	100	66.365	ENSDNOG00000010821	SRPRA	100	66.365	Dasypus_novemcinctus
ENSDARG00000061124	srpra	100	67.021	ENSDORG00000016719	Srpr	100	67.372	Dipodomys_ordii
ENSDARG00000061124	srpra	99	50.917	FBgn0010391	Gtp-bp	100	51.529	Drosophila_melanogaster
ENSDARG00000061124	srpra	100	64.857	ENSETEG00000013956	SRPRA	100	64.857	Echinops_telfairi
ENSDARG00000061124	srpra	50	80.923	ENSEBUG00000002602	srpra	92	66.276	Eptatretus_burgeri
ENSDARG00000061124	srpra	100	66.718	ENSEASG00005022980	SRPRA	100	66.718	Equus_asinus_asinus
ENSDARG00000061124	srpra	100	66.565	ENSECAG00000014692	SRPRA	100	66.565	Equus_caballus
ENSDARG00000061124	srpra	100	61.927	ENSEEUG00000007920	SRPRA	100	61.621	Erinaceus_europaeus
ENSDARG00000061124	srpra	100	78.779	ENSELUG00000017643	srpra	100	79.268	Esox_lucius
ENSDARG00000061124	srpra	80	60.225	ENSFCAG00000030894	-	99	60.225	Felis_catus
ENSDARG00000061124	srpra	100	66.566	ENSFCAG00000011274	-	100	66.566	Felis_catus
ENSDARG00000061124	srpra	99	64.482	ENSFALG00000005048	SRPRA	99	63.872	Ficedula_albicollis
ENSDARG00000061124	srpra	100	66.768	ENSFDAG00000016229	SRPRA	92	85.315	Fukomys_damarensis
ENSDARG00000061124	srpra	100	77.863	ENSFHEG00000016959	srpra	100	77.863	Fundulus_heteroclitus
ENSDARG00000061124	srpra	100	75.643	ENSGMOG00000013244	srpra	100	76.220	Gadus_morhua
ENSDARG00000061124	srpra	100	67.976	ENSGALG00000030759	SRPRA	100	67.970	Gallus_gallus
ENSDARG00000061124	srpra	100	77.405	ENSGAFG00000000453	srpra	100	78.015	Gambusia_affinis
ENSDARG00000061124	srpra	100	74.885	ENSGACG00000006550	srpra	100	75.191	Gasterosteus_aculeatus
ENSDARG00000061124	srpra	100	67.933	ENSGAGG00000021157	SRPRA	100	67.322	Gopherus_agassizii
ENSDARG00000061124	srpra	100	66.616	ENSGGOG00000012962	SRPRA	100	67.071	Gorilla_gorilla
ENSDARG00000061124	srpra	100	78.539	ENSHBUG00000000119	srpra	100	79.695	Haplochromis_burtoni
ENSDARG00000061124	srpra	100	67.173	ENSHGLG00000001597	SRPR	94	90.909	Heterocephalus_glaber_female
ENSDARG00000061124	srpra	100	67.173	ENSHGLG00100006449	SRPR	94	90.909	Heterocephalus_glaber_male
ENSDARG00000061124	srpra	100	77.017	ENSHCOG00000010749	srpra	100	77.930	Hippocampus_comes
ENSDARG00000061124	srpra	94	76.961	ENSIPUG00000000867	srpra	99	76.961	Ictalurus_punctatus
ENSDARG00000061124	srpra	100	66.616	ENSSTOG00000009897	SRPRA	100	67.171	Ictidomys_tridecemlineatus
ENSDARG00000061124	srpra	100	66.920	ENSJJAG00000020272	Srpr	100	66.516	Jaculus_jaculus
ENSDARG00000061124	srpra	100	77.217	ENSKMAG00000002280	srpra	100	78.135	Kryptolebias_marmoratus
ENSDARG00000061124	srpra	100	77.710	ENSLBEG00000009608	srpra	100	77.710	Labrus_bergylta
ENSDARG00000061124	srpra	100	67.421	ENSLACG00000017781	SRPRA	100	69.127	Latimeria_chalumnae
ENSDARG00000061124	srpra	100	75.038	ENSLOCG00000002733	srpra	100	74.734	Lepisosteus_oculatus
ENSDARG00000061124	srpra	100	64.697	ENSLAFG00000010252	SRPRA	100	65.658	Loxodonta_africana
ENSDARG00000061124	srpra	100	66.920	ENSMFAG00000032606	SRPRA	100	67.375	Macaca_fascicularis
ENSDARG00000061124	srpra	100	66.920	ENSMMUG00000007938	SRPRA	100	67.375	Macaca_mulatta
ENSDARG00000061124	srpra	100	66.920	ENSMNEG00000030709	SRPRA	100	67.375	Macaca_nemestrina
ENSDARG00000061124	srpra	100	67.021	ENSMLEG00000043404	SRPRA	100	67.375	Mandrillus_leucophaeus
ENSDARG00000061124	srpra	100	77.252	ENSMAMG00000000473	srpra	100	77.439	Mastacembelus_armatus
ENSDARG00000061124	srpra	100	78.387	ENSMZEG00005013432	srpra	100	79.542	Maylandia_zebra
ENSDARG00000061124	srpra	94	67.045	ENSMGAG00000000732	SRPRA	100	66.882	Meleagris_gallopavo
ENSDARG00000061124	srpra	100	67.375	ENSMAUG00000015648	Srpr	100	67.523	Mesocricetus_auratus
ENSDARG00000061124	srpra	100	66.464	ENSMICG00000015981	SRPRA	100	67.424	Microcebus_murinus
ENSDARG00000061124	srpra	100	66.768	ENSMOCG00000008311	Srpr	100	67.678	Microtus_ochrogaster
ENSDARG00000061124	srpra	100	73.425	ENSMMOG00000005019	srpra	100	72.866	Mola_mola
ENSDARG00000061124	srpra	100	65.198	ENSMODG00000004576	-	100	65.701	Monodelphis_domestica
ENSDARG00000061124	srpra	100	77.405	ENSMALG00000011343	srpra	100	77.744	Monopterus_albus
ENSDARG00000061124	srpra	100	66.364	MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	Mus_caroli
ENSDARG00000061124	srpra	100	67.474	ENSMUSG00000032042	Srpr	86	90.909	Mus_musculus
ENSDARG00000061124	srpra	100	66.768	MGP_PahariEiJ_G0014816	Srpr	86	90.909	Mus_pahari
ENSDARG00000061124	srpra	100	63.663	MGP_SPRETEiJ_G0033075	Srpr	100	64.502	Mus_spretus
ENSDARG00000061124	srpra	100	67.121	ENSMPUG00000006626	SRPRA	100	66.970	Mustela_putorius_furo
ENSDARG00000061124	srpra	100	66.667	ENSMLUG00000017334	SRPRA	100	67.121	Myotis_lucifugus
ENSDARG00000061124	srpra	100	67.173	ENSNGAG00000015686	Srpr	100	67.629	Nannospalax_galili
ENSDARG00000061124	srpra	100	77.879	ENSNBRG00000017311	srpra	100	79.027	Neolamprologus_brichardi
ENSDARG00000061124	srpra	99	63.359	ENSNLEG00000007467	SRPRA	100	66.614	Nomascus_leucogenys
ENSDARG00000061124	srpra	94	63.768	ENSMEUG00000004956	SRPRA	100	64.297	Notamacropus_eugenii
ENSDARG00000061124	srpra	100	63.150	ENSOPRG00000013160	SRPRA	100	63.150	Ochotona_princeps
ENSDARG00000061124	srpra	100	66.870	ENSODEG00000004730	SRPRA	100	66.768	Octodon_degus
ENSDARG00000061124	srpra	100	78.234	ENSONIG00000005324	srpra	100	79.389	Oreochromis_niloticus
ENSDARG00000061124	srpra	100	66.565	ENSOCUG00000017057	SRPRA	100	67.021	Oryctolagus_cuniculus
ENSDARG00000061124	srpra	84	93.968	ENSORLG00000014676	srpra	94	93.558	Oryzias_latipes
ENSDARG00000061124	srpra	100	77.727	ENSORLG00020009240	srpra	100	77.727	Oryzias_latipes_hni
ENSDARG00000061124	srpra	100	77.573	ENSORLG00015015405	srpra	100	77.573	Oryzias_latipes_hsok
ENSDARG00000061124	srpra	100	77.266	ENSOMEG00000005872	srpra	100	77.266	Oryzias_melastigma
ENSDARG00000061124	srpra	100	66.566	ENSOGAG00000008926	SRPRA	100	66.566	Otolemur_garnettii
ENSDARG00000061124	srpra	100	63.444	ENSOARG00000012397	SRPRA	100	63.691	Ovis_aries
ENSDARG00000061124	srpra	100	66.616	ENSPPAG00000030813	SRPRA	100	67.071	Pan_paniscus
ENSDARG00000061124	srpra	100	66.566	ENSPPRG00000001542	SRPRA	100	66.566	Panthera_pardus
ENSDARG00000061124	srpra	100	66.415	ENSPTIG00000006989	SRPRA	100	66.415	Panthera_tigris_altaica
ENSDARG00000061124	srpra	100	66.616	ENSPTRG00000028360	SRPRA	100	67.071	Pan_troglodytes
ENSDARG00000061124	srpra	100	66.920	ENSPANG00000010858	SRPRA	100	67.375	Papio_anubis
ENSDARG00000061124	srpra	100	75.799	ENSPKIG00000016106	srpra	100	77.017	Paramormyrops_kingsleyae
ENSDARG00000061124	srpra	94	67.851	ENSPSIG00000012009	SRPRA	100	67.581	Pelodiscus_sinensis
ENSDARG00000061124	srpra	100	76.723	ENSPMGG00000001393	srpra	100	76.110	Periophthalmus_magnuspinnatus
ENSDARG00000061124	srpra	100	67.021	ENSPEMG00000018279	Srpr	100	67.625	Peromyscus_maniculatus_bairdii
ENSDARG00000061124	srpra	99	59.451	ENSPMAG00000009559	srpra	99	60.213	Petromyzon_marinus
ENSDARG00000061124	srpra	100	64.036	ENSPCIG00000010207	SRPRA	100	65.701	Phascolarctos_cinereus
ENSDARG00000061124	srpra	100	77.252	ENSPFOG00000003114	srpra	100	78.473	Poecilia_formosa
ENSDARG00000061124	srpra	100	77.252	ENSPLAG00000007323	srpra	100	78.473	Poecilia_latipinna
ENSDARG00000061124	srpra	100	77.099	ENSPMEG00000015658	srpra	100	78.321	Poecilia_mexicana
ENSDARG00000061124	srpra	100	77.710	ENSPREG00000004937	srpra	100	77.710	Poecilia_reticulata
ENSDARG00000061124	srpra	89	86.842	ENSPPYG00000004045	SRPRA	100	86.842	Pongo_abelii
ENSDARG00000061124	srpra	61	90.698	ENSPCAG00000003801	-	62	90.698	Procavia_capensis
ENSDARG00000061124	srpra	100	66.516	ENSPCOG00000025726	SRPRA	100	67.071	Propithecus_coquereli
ENSDARG00000061124	srpra	100	66.921	ENSPVAG00000000993	SRPRA	100	67.226	Pteropus_vampyrus
ENSDARG00000061124	srpra	100	78.387	ENSPNYG00000012371	srpra	100	79.542	Pundamilia_nyererei
ENSDARG00000061124	srpra	100	80.154	ENSPNAG00000013476	srpra	100	81.538	Pygocentrus_nattereri
ENSDARG00000061124	srpra	100	66.717	ENSRNOG00000010543	Srpra	100	67.474	Rattus_norvegicus
ENSDARG00000061124	srpra	100	67.474	ENSRBIG00000008702	SRPRA	100	67.474	Rhinopithecus_bieti
ENSDARG00000061124	srpra	100	66.818	ENSRROG00000029494	SRPRA	100	67.273	Rhinopithecus_roxellana
ENSDARG00000061124	srpra	50	42.733	YDR292C	-	74	35.714	Saccharomyces_cerevisiae
ENSDARG00000061124	srpra	100	66.313	ENSSBOG00000035892	SRPRA	100	66.768	Saimiri_boliviensis_boliviensis
ENSDARG00000061124	srpra	94	64.205	ENSSHAG00000009168	SRPRA	100	64.895	Sarcophilus_harrisii
ENSDARG00000061124	srpra	100	72.308	ENSSFOG00015008837	srpra	100	72.308	Scleropages_formosus
ENSDARG00000061124	srpra	100	71.385	ENSSMAG00000002783	srpra	100	72.308	Scophthalmus_maximus
ENSDARG00000061124	srpra	100	77.508	ENSSDUG00000013920	srpra	100	73.692	Seriola_dumerili
ENSDARG00000061124	srpra	100	77.626	ENSSLDG00000008601	srpra	93	78.082	Seriola_lalandi_dorsalis
ENSDARG00000061124	srpra	82	80.488	ENSSARG00000012434	SRPRA	86	80.488	Sorex_araneus
ENSDARG00000061124	srpra	100	66.314	ENSSPUG00000018221	SRPRA	100	66.921	Sphenodon_punctatus
ENSDARG00000061124	srpra	100	79.148	ENSSPAG00000005103	srpra	100	79.148	Stegastes_partitus
ENSDARG00000061124	srpra	100	65.961	ENSSSCG00000015227	SRPRA	100	66.565	Sus_scrofa
ENSDARG00000061124	srpra	94	64.839	ENSTGUG00000000815	SRPRA	100	64.194	Taeniopygia_guttata
ENSDARG00000061124	srpra	100	76.876	ENSTRUG00000006856	srpra	100	77.029	Takifugu_rubripes
ENSDARG00000061124	srpra	100	73.083	ENSTNIG00000010316	srpra	100	73.083	Tetraodon_nigroviridis
ENSDARG00000061124	srpra	100	66.465	ENSTTRG00000001558	SRPRA	100	66.161	Tursiops_truncatus
ENSDARG00000061124	srpra	100	66.313	ENSUAMG00000005510	SRPRA	100	66.260	Ursus_americanus
ENSDARG00000061124	srpra	96	60.876	ENSUMAG00000002269	SRPRA	100	60.945	Ursus_maritimus
ENSDARG00000061124	srpra	69	90.698	ENSVPAG00000001077	SRPRA	75	90.698	Vicugna_pacos
ENSDARG00000061124	srpra	100	66.565	ENSVVUG00000020094	SRPRA	100	66.565	Vulpes_vulpes
ENSDARG00000061124	srpra	100	58.359	ENSXETG00000003920	srpra	100	59.545	Xenopus_tropicalis
ENSDARG00000061124	srpra	84	92.698	ENSXCOG00000001286	srpra	100	91.291	Xiphophorus_couchianus
ENSDARG00000061124	srpra	100	78.015	ENSXMAG00000028401	srpra	100	78.321	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005047	signal recognition particle binding	21873635.	IBA	Function
GO:0005047	signal recognition particle binding	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005785	signal recognition particle receptor complex	-	IEA	Component
GO:0005789	endoplasmic reticulum membrane	21873635.	IBA	Component
GO:0006605	protein targeting	21873635.	IBA	Process
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	-	IEA	Process
GO:0006886	intracellular protein transport	-	IEA	Process
GO:0016020	membrane	21873635.	IBA	Component
GO:0045047	protein targeting to ER	21873635.	IBA	Process