EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000061370 (Gene tree)
Gene ID: 565995
Gene Symbol: tsen34
Alias: si:ch211-203b8.3
Full Name: TSEN34 tRNA splicing endonuclease subunit
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 4777 bases
Position: chr18:41542542-41547318
Accession: ZDB-GENE-050419-115
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000081879	tRNA_int_endo	PF01974.17	8.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000087445	-	1311	XM_005159232	ENSDARP00000081879	308 (aa)	XP_005159289	A2BIL9

Gene Model

Click here to download ENSDARG00000061370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000061370's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000061370	tsen34	89	39.172	ENSG00000170892	TSEN34	99	38.924	Homo_sapiens
ENSDARG00000061370	tsen34	84	54.373	ENSAPOG00000012557	-	87	53.612	Acanthochromis_polyacanthus
ENSDARG00000061370	tsen34	88	50.181	ENSAPOG00000008579	-	94	53.184	Acanthochromis_polyacanthus
ENSDARG00000061370	tsen34	89	54.577	ENSAPOG00000001248	tsen34	95	53.873	Acanthochromis_polyacanthus
ENSDARG00000061370	tsen34	77	39.568	ENSAMEG00000004585	TSEN34	95	39.568	Ailuropoda_melanoleuca
ENSDARG00000061370	tsen34	89	53.430	ENSACIG00000007110	tsen34	88	53.430	Amphilophus_citrinellus
ENSDARG00000061370	tsen34	89	54.577	ENSAOCG00000006905	tsen34	95	53.873	Amphiprion_ocellaris
ENSDARG00000061370	tsen34	89	54.225	ENSAPEG00000019171	tsen34	95	53.521	Amphiprion_percula
ENSDARG00000061370	tsen34	89	51.812	ENSATEG00000019800	tsen34	96	53.986	Anabas_testudineus
ENSDARG00000061370	tsen34	89	38.907	ENSACAG00000016189	TSEN34	99	39.228	Anolis_carolinensis
ENSDARG00000061370	tsen34	89	38.535	ENSANAG00000026113	TSEN34	99	38.217	Aotus_nancymaae
ENSDARG00000061370	tsen34	89	54.380	ENSACLG00000009661	tsen34	96	52.982	Astatotilapia_calliptera
ENSDARG00000061370	tsen34	89	65.125	ENSAMXG00000017568	tsen34	91	62.245	Astyanax_mexicanus
ENSDARG00000061370	tsen34	89	38.413	ENSBTAG00000006486	TSEN34	99	38.486	Bos_taurus
ENSDARG00000061370	tsen34	89	40.000	ENSCJAG00000001128	TSEN34	99	39.667	Callithrix_jacchus
ENSDARG00000061370	tsen34	89	37.304	ENSCAFG00000002675	TSEN34	99	38.365	Canis_familiaris
ENSDARG00000061370	tsen34	89	37.580	ENSCAFG00020018350	TSEN34	99	38.608	Canis_lupus_dingo
ENSDARG00000061370	tsen34	85	39.933	ENSCHIG00000020705	TSEN34	96	40.000	Capra_hircus
ENSDARG00000061370	tsen34	87	37.134	ENSTSYG00000028200	TSEN34	98	36.774	Carlito_syrichta
ENSDARG00000061370	tsen34	89	39.937	ENSCPOG00000012672	TSEN34	99	39.937	Cavia_porcellus
ENSDARG00000061370	tsen34	89	38.854	ENSCCAG00000036023	TSEN34	99	38.535	Cebus_capucinus
ENSDARG00000061370	tsen34	85	36.842	ENSCATG00000033390	TSEN34	94	36.842	Cercocebus_atys
ENSDARG00000061370	tsen34	89	39.414	ENSCLAG00000000618	TSEN34	99	39.088	Chinchilla_lanigera
ENSDARG00000061370	tsen34	89	38.291	ENSCSAG00000001891	TSEN34	99	38.291	Chlorocebus_sabaeus
ENSDARG00000061370	tsen34	89	40.063	ENSCANG00000040984	TSEN34	99	40.063	Colobus_angolensis_palliatus
ENSDARG00000061370	tsen34	89	37.304	ENSCGRG00001006296	Tsen34	99	36.677	Cricetulus_griseus_chok1gshd
ENSDARG00000061370	tsen34	92	51.379	ENSCSEG00000006278	tsen34	93	51.034	Cynoglossus_semilaevis
ENSDARG00000061370	tsen34	89	36.943	ENSDNOG00000039332	TSEN34	99	35.669	Dasypus_novemcinctus
ENSDARG00000061370	tsen34	89	36.977	ENSDORG00000029071	Tsen34	99	36.977	Dipodomys_ordii
ENSDARG00000061370	tsen34	89	37.188	ENSEASG00005021580	TSEN34	99	37.188	Equus_asinus_asinus
ENSDARG00000061370	tsen34	89	37.898	ENSECAG00000019651	TSEN34	86	37.975	Equus_caballus
ENSDARG00000061370	tsen34	68	32.227	ENSEEUG00000005692	TSEN34	64	32.673	Erinaceus_europaeus
ENSDARG00000061370	tsen34	89	60.915	ENSELUG00000006262	tsen34	92	60.915	Esox_lucius
ENSDARG00000061370	tsen34	89	39.172	ENSFCAG00000014045	TSEN34	99	39.241	Felis_catus
ENSDARG00000061370	tsen34	54	46.512	ENSFDAG00000017995	TSEN34	90	39.648	Fukomys_damarensis
ENSDARG00000061370	tsen34	93	50.340	ENSFHEG00000008791	tsen34	97	52.381	Fundulus_heteroclitus
ENSDARG00000061370	tsen34	64	57.071	ENSGMOG00000001961	tsen34	97	57.071	Gadus_morhua
ENSDARG00000061370	tsen34	94	50.680	ENSGAFG00000016880	tsen34	99	51.361	Gambusia_affinis
ENSDARG00000061370	tsen34	89	47.368	ENSGACG00000004800	tsen34	99	47.039	Gasterosteus_aculeatus
ENSDARG00000061370	tsen34	89	40.351	ENSGAGG00000008982	TSEN34	73	40.351	Gopherus_agassizii
ENSDARG00000061370	tsen34	89	39.172	ENSGGOG00000008197	TSEN34	99	38.924	Gorilla_gorilla
ENSDARG00000061370	tsen34	89	53.650	ENSHBUG00000016593	tsen34	83	55.109	Haplochromis_burtoni
ENSDARG00000061370	tsen34	89	38.065	ENSHGLG00000017619	TSEN34	99	37.821	Heterocephalus_glaber_female
ENSDARG00000061370	tsen34	89	51.812	ENSHCOG00000001368	tsen34	96	52.174	Hippocampus_comes
ENSDARG00000061370	tsen34	94	62.458	ENSIPUG00000008359	tsen34	93	62.458	Ictalurus_punctatus
ENSDARG00000061370	tsen34	85	37.954	ENSSTOG00000023816	TSEN34	96	37.624	Ictidomys_tridecemlineatus
ENSDARG00000061370	tsen34	89	37.421	ENSJJAG00000016301	Tsen34	99	37.107	Jaculus_jaculus
ENSDARG00000061370	tsen34	89	52.688	ENSKMAG00000007181	tsen34	92	53.041	Kryptolebias_marmoratus
ENSDARG00000061370	tsen34	89	53.430	ENSLBEG00000015001	tsen34	95	55.596	Labrus_bergylta
ENSDARG00000061370	tsen34	62	37.553	ENSLACG00000013346	-	99	37.553	Latimeria_chalumnae
ENSDARG00000061370	tsen34	90	53.191	ENSLOCG00000001887	tsen34	100	52.837	Lepisosteus_oculatus
ENSDARG00000061370	tsen34	89	36.875	ENSLAFG00000015215	TSEN34	99	36.562	Loxodonta_africana
ENSDARG00000061370	tsen34	89	38.291	ENSMFAG00000044825	TSEN34	99	38.291	Macaca_fascicularis
ENSDARG00000061370	tsen34	89	38.291	ENSMMUG00000016571	TSEN34	99	38.291	Macaca_mulatta
ENSDARG00000061370	tsen34	89	38.291	ENSMNEG00000045457	TSEN34	99	38.291	Macaca_nemestrina
ENSDARG00000061370	tsen34	99	50.000	ENSMAMG00000018407	tsen34	99	51.916	Mastacembelus_armatus
ENSDARG00000061370	tsen34	89	52.190	ENSMZEG00005002313	tsen34	93	55.109	Maylandia_zebra
ENSDARG00000061370	tsen34	70	31.008	ENSMAUG00000019716	Tsen34	81	30.620	Mesocricetus_auratus
ENSDARG00000061370	tsen34	89	38.535	ENSMICG00000002409	TSEN34	99	38.217	Microcebus_murinus
ENSDARG00000061370	tsen34	89	37.267	ENSMOCG00000022190	Tsen34	99	36.957	Microtus_ochrogaster
ENSDARG00000061370	tsen34	94	48.742	ENSMMOG00000009551	tsen34	96	52.239	Mola_mola
ENSDARG00000061370	tsen34	94	37.037	ENSMODG00000003984	-	80	39.198	Monodelphis_domestica
ENSDARG00000061370	tsen34	92	53.497	ENSMALG00000018918	tsen34	98	53.846	Monopterus_albus
ENSDARG00000061370	tsen34	89	37.778	MGP_CAROLIEiJ_G0029099	Tsen34	99	37.460	Mus_caroli
ENSDARG00000061370	tsen34	89	37.812	ENSMUSG00000035585	Tsen34	97	47.170	Mus_musculus
ENSDARG00000061370	tsen34	89	37.855	MGP_PahariEiJ_G0020968	Tsen34	99	37.539	Mus_pahari
ENSDARG00000061370	tsen34	89	37.812	MGP_SPRETEiJ_G0030152	Tsen34	99	37.500	Mus_spretus
ENSDARG00000061370	tsen34	89	37.898	ENSMPUG00000010373	TSEN34	99	37.975	Mustela_putorius_furo
ENSDARG00000061370	tsen34	89	38.413	ENSMLUG00000016894	TSEN34	99	38.486	Myotis_lucifugus
ENSDARG00000061370	tsen34	70	32.308	ENSNGAG00000016187	Tsen34	93	31.923	Nannospalax_galili
ENSDARG00000061370	tsen34	89	54.874	ENSNBRG00000008640	tsen34	98	54.945	Neolamprologus_brichardi
ENSDARG00000061370	tsen34	89	38.636	ENSNLEG00000006309	TSEN34	99	38.961	Nomascus_leucogenys
ENSDARG00000061370	tsen34	85	43.657	ENSMEUG00000002978	TSEN34	96	43.657	Notamacropus_eugenii
ENSDARG00000061370	tsen34	89	36.562	ENSODEG00000000096	TSEN34	99	36.562	Octodon_degus
ENSDARG00000061370	tsen34	89	54.015	ENSONIG00000017253	tsen34	99	54.745	Oreochromis_niloticus
ENSDARG00000061370	tsen34	62	36.744	ENSOANG00000014747	-	97	36.937	Ornithorhynchus_anatinus
ENSDARG00000061370	tsen34	92	54.386	ENSORLG00015012740	tsen34	98	54.386	Oryzias_latipes_hsok
ENSDARG00000061370	tsen34	94	53.425	ENSOMEG00000016771	tsen34	99	53.425	Oryzias_melastigma
ENSDARG00000061370	tsen34	89	38.854	ENSOGAG00000006966	TSEN34	99	38.608	Otolemur_garnettii
ENSDARG00000061370	tsen34	71	38.168	ENSOARG00000002763	TSEN34	79	38.298	Ovis_aries
ENSDARG00000061370	tsen34	89	38.854	ENSPPAG00000036935	TSEN34	99	38.608	Pan_paniscus
ENSDARG00000061370	tsen34	89	39.172	ENSPPRG00000011779	TSEN34	99	39.241	Panthera_pardus
ENSDARG00000061370	tsen34	89	39.172	ENSPTRG00000044768	-	99	38.924	Pan_troglodytes
ENSDARG00000061370	tsen34	89	39.172	ENSPTRG00000011448	TSEN34	99	38.924	Pan_troglodytes
ENSDARG00000061370	tsen34	89	38.291	ENSPANG00000012101	TSEN34	99	38.291	Papio_anubis
ENSDARG00000061370	tsen34	91	53.381	ENSPKIG00000014674	tsen34	96	53.381	Paramormyrops_kingsleyae
ENSDARG00000061370	tsen34	89	37.658	ENSPEMG00000014535	Tsen34	99	37.342	Peromyscus_maniculatus_bairdii
ENSDARG00000061370	tsen34	94	51.027	ENSPFOG00000008679	tsen34	99	51.712	Poecilia_formosa
ENSDARG00000061370	tsen34	95	52.862	ENSPLAG00000017309	tsen34	99	52.862	Poecilia_latipinna
ENSDARG00000061370	tsen34	94	51.027	ENSPMEG00000005235	tsen34	99	51.712	Poecilia_mexicana
ENSDARG00000061370	tsen34	89	55.872	ENSPREG00000021784	tsen34	94	55.516	Poecilia_reticulata
ENSDARG00000061370	tsen34	92	38.580	ENSPPYG00000010376	TSEN34	98	38.272	Pongo_abelii
ENSDARG00000061370	tsen34	85	38.614	ENSPCAG00000012359	TSEN34	96	38.284	Procavia_capensis
ENSDARG00000061370	tsen34	89	37.898	ENSPCOG00000013843	TSEN34	99	37.898	Propithecus_coquereli
ENSDARG00000061370	tsen34	89	39.103	ENSPVAG00000015570	TSEN34	96	40.532	Pteropus_vampyrus
ENSDARG00000061370	tsen34	89	54.015	ENSPNYG00000024090	tsen34	73	55.474	Pundamilia_nyererei
ENSDARG00000061370	tsen34	96	63.107	ENSPNAG00000028698	tsen34	94	63.107	Pygocentrus_nattereri
ENSDARG00000061370	tsen34	89	37.658	ENSRNOG00000055179	Tsen34	99	37.342	Rattus_norvegicus
ENSDARG00000061370	tsen34	89	37.658	ENSRNOG00000059572	Tsen34l1	99	37.342	Rattus_norvegicus
ENSDARG00000061370	tsen34	89	38.291	ENSRBIG00000034430	TSEN34	99	38.291	Rhinopithecus_bieti
ENSDARG00000061370	tsen34	89	38.291	ENSRROG00000024217	TSEN34	99	38.291	Rhinopithecus_roxellana
ENSDARG00000061370	tsen34	85	37.417	ENSSBOG00000016017	TSEN34	96	36.789	Saimiri_boliviensis_boliviensis
ENSDARG00000061370	tsen34	59	58.730	ENSSFOG00015017579	tsen34	79	58.730	Scleropages_formosus
ENSDARG00000061370	tsen34	89	53.381	ENSSMAG00000005214	tsen34	97	53.381	Scophthalmus_maximus
ENSDARG00000061370	tsen34	89	51.418	ENSSDUG00000005391	tsen34	96	52.234	Seriola_dumerili
ENSDARG00000061370	tsen34	92	50.515	ENSSLDG00000006144	tsen34	92	52.577	Seriola_lalandi_dorsalis
ENSDARG00000061370	tsen34	72	36.466	ENSSARG00000005857	TSEN34	69	36.466	Sorex_araneus
ENSDARG00000061370	tsen34	89	40.418	ENSSPUG00000008447	TSEN34	99	40.418	Sphenodon_punctatus
ENSDARG00000061370	tsen34	96	49.333	ENSSPAG00000010512	tsen34	97	52.778	Stegastes_partitus
ENSDARG00000061370	tsen34	92	38.110	ENSSSCG00000003268	TSEN34	99	38.486	Sus_scrofa
ENSDARG00000061370	tsen34	88	48.000	ENSTRUG00000000787	tsen34	81	56.904	Takifugu_rubripes
ENSDARG00000061370	tsen34	89	44.850	ENSTNIG00000011201	tsen34	99	50.166	Tetraodon_nigroviridis
ENSDARG00000061370	tsen34	89	50.169	ENSTNIG00000001937	-	99	50.166	Tetraodon_nigroviridis
ENSDARG00000061370	tsen34	89	38.217	ENSTTRG00000006571	TSEN34	99	38.291	Tursiops_truncatus
ENSDARG00000061370	tsen34	89	37.898	ENSUAMG00000008701	TSEN34	99	37.658	Ursus_americanus
ENSDARG00000061370	tsen34	89	37.580	ENSVVUG00000008211	TSEN34	99	38.608	Vulpes_vulpes
ENSDARG00000061370	tsen34	89	40.604	ENSXETG00000004597	tsen34	99	40.604	Xenopus_tropicalis
ENSDARG00000061370	tsen34	94	51.361	ENSXMAG00000024266	tsen34	99	52.041	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000213	tRNA-intron endonuclease activity	21873635.	IBA	Function
GO:0000213	tRNA-intron endonuclease activity	-	IEA	Function
GO:0000214	tRNA-intron endonuclease complex	-	IEA	Component
GO:0000379	tRNA-type intron splice site recognition and cleavage	21873635.	IBA	Process
GO:0000379	tRNA-type intron splice site recognition and cleavage	-	IEA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004518	nuclease activity	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	-	IEA	Process
GO:0008033	tRNA processing	-	IEA	Process
GO:0016829	lyase activity	-	IEA	Function